Basic Information

Insect: Calameuta idolon
Gene Symbol: bab2
Assembly: GCA_030142285.1
Location: JARQSV010000355.1:1522844-1536470[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.3e-12 1.3e-09 37.6 0.0 1 39 379 418 379 422 0.90

2 4 3.9e-12 4.1e-09 36.1 0.1 2 39 434 471 433 474 0.94

3 4 1.4e-18 1.5e-15 56.7 0.0 2 45 489 533 488 533 0.97

4 4 1.6e-18 1.7e-15 56.5 0.1 1 42 540 582 540 583 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.3e-12	1.3e-09	37.6	0.0	1	39	379	418	379	422	0.90
2	4	3.9e-12	4.1e-09	36.1	0.1	2	39	434	471	433	474	0.94
3	4	1.4e-18	1.5e-15	56.7	0.0	2	45	489	533	488	533	0.97
4	4	1.6e-18	1.7e-15	56.5	0.1	1	42	540	582	540	583	0.97

Sequence Information

Coding Sequence: ATGGAGTCCGATCAATTCTGGGGTATTCACTACAGTGGAGGCATGGCCGGGCAGCATTACTGCCTGCGCTGGAACAACTACCAGTCGAATATGACATCCGTCTTTCATCAGCTCCTACAGACAGAGGCCTTCGTAGACGTGACCCTAGCCTGTAACGAAGCATCGTTAAAGGCGCACAAGGTCGTCTTGTCAGCATGCAGTTCctattttcaaaagttattgCTCTCCAATCCCTGCAAACATCCGACGATCATCATGCCGCAGGACGTGTGCTTCAATGATCTCAAATTCATCATCGAATTTGTCTACAGAGGAGAGATTGACGTGTCCCAGGCAGAGCTTCAGTCCCTGCTCAAGACAGCCGATCAGCTGAAGATCAAGGGCCTCTGCGAAGTGCCAGAGAGCAAGGACGGTCCACCGTCGGTCAGTCTGAGCTCACCAGGTATAGAGGCAAGCACACCGCGGCTCAACTACGCCAAACTGAAGAGGCACCATCCAAGGTACAAGAGACCCAGGTTCGAGCCTCGAAACGACTCCAGGCATTACGAGAAGTATAAAGAGGAAGAGGCCACCGAGGCCTTCAGTCGTGACGATAAGGAGAATCACAGAGGCTGGCAGACCGAGGATGAAGAGTGCGCAGAGGCCGCAGTAGTCCTGGAGTCCTGCCAACGTGACAACAACAACGGTAACAGtacaaataacaataacgGTGACATGTTTTGTCACACAGGGTTAGGTCACTACGGTCATCATCCGGACCCGGGAGAGGTCGATCTACCCCCTGAGACTCAGCCCACACCCCCCAGCGCTACTTTAGTTGGCACCACGATCACCCACCTGAGAGATCCCGATCATCACTCGACAGATATCCAGAATTGCGACAGTGTCAAGATCAAGTTCGAGACTTTGCACACGATGGATTCCTCGGAtacgatcgatatcgatagcCACATGTCGGACAGGGCGAGTGTGAGTTCGAAGAACGCTGTGGATAACGATAATATGATGATGATCACGCCAGAATTATTGGGCCTCATGCCGTCGGGAAGTTCGGTACATTCGGATTCCGGTGAGACAAATGCGAGAGGACATTCGGGTCAGTCTGGCTCGCATCATCACGGTTCCAAGTCTTGGACGCAGGAGGACATGGACGCGGCCTTGGAGGCCCTTAGGAATCACGATATGAGTCTTACAAAAGCATCAGCAACATTCGGTATACCATCGACGACCTTGTGGCAGCGTGCTCATCGTCTTGGCATTGATACTCCAAAAAAGGATGGACCCACCAAATCTTGGAGCGACGAGAGTCTGAACAACGCGCTGGAGGCACTTAGGACCGGCACCATCTCGGCTAACAAGGCTTCAAAGGCCTTTGGCATCCCCTCGAGCACCCTGTACAAAATTGCTAGAAGAGAGGGTATCAGATTAGCTGCTCCCTTCAACGCGAGCCCCACCACTTGGTCCCCTGCCGACCTGGACCGAGCCCTCGAGGCAATAAGGTCCGGTCAGACGTCGGTGCAAAGAGCTTCGACCGAGTTTGGAATTCCTACAGGAACTCTATACGGCAGATGCAAGAGGGAAGGTATCGAGCTCAGCAGAAGCAATCCGACGCCTTGGAGCGAAGACGCCATGACGGAGGCTCTAGAAGCCGTTCGATTGGGTCACATGAGCATCAACCAAGCAGCCATTCACTATAATTTACCATATTCATCCCTTTATGGACGATTCAAAAGAGGGAAGTACGAAGAGCCTGTTGTTAGTGAAATGTCTCAAGACGGCGGTAGCCCTCACTATCATCAGAGTCCTAATCAGAATCACTCCACTTCTCTCCCCGATCAAATGCCTTATCAGGGCAGCTGA
Protein Sequence: MESDQFWGIHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESKDGPPSVSLSSPGIEASTPRLNYAKLKRHHPRYKRPRFEPRNDSRHYEKYKEEEATEAFSRDDKENHRGWQTEDEECAEAAVVLESCQRDNNNGNSTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAVDNDNMMMITPELLGLMPSGSSVHSDSGETNARGHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVSEMSQDGGSPHYHQSPNQNHSTSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00292363;
80% Identity: iTF_00253691;