Basic Information

Insect: Calameuta filum
Gene Symbol: salm
Assembly: GCA_031763695.1
Location: JARPRI010000525.1:85843-95703[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.7e-06 0.00047 20.5 0.9 1 23 497 519 497 519 0.98

2 9 1.3e-05 0.00093 19.6 2.1 1 23 525 547 525 547 0.98

3 9 0.084 5.8 7.6 3.8 2 23 1007 1028 1006 1028 0.98

4 9 5.8e-08 4e-06 27.0 0.6 1 23 1034 1056 1034 1056 0.97

5 9 8.1e-05 0.0056 17.1 2.6 1 23 1066 1088 1066 1088 0.98

6 9 0.0028 0.2 12.3 1.9 2 23 1498 1519 1497 1519 0.97

7 9 0.036 2.5 8.8 0.9 1 14 1525 1538 1525 1540 0.92

8 9 1.4e-06 9.5e-05 22.7 2.1 3 23 1746 1766 1744 1766 0.96

9 9 2.7e-07 1.9e-05 24.9 0.9 1 23 1772 1794 1772 1794 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.7e-06	0.00047	20.5	0.9	1	23	497	519	497	519	0.98
2	9	1.3e-05	0.00093	19.6	2.1	1	23	525	547	525	547	0.98
3	9	0.084	5.8	7.6	3.8	2	23	1007	1028	1006	1028	0.98
4	9	5.8e-08	4e-06	27.0	0.6	1	23	1034	1056	1034	1056	0.97
5	9	8.1e-05	0.0056	17.1	2.6	1	23	1066	1088	1066	1088	0.98
6	9	0.0028	0.2	12.3	1.9	2	23	1498	1519	1497	1519	0.97
7	9	0.036	2.5	8.8	0.9	1	14	1525	1538	1525	1540	0.92
8	9	1.4e-06	9.5e-05	22.7	2.1	3	23	1746	1766	1744	1766	0.96
9	9	2.7e-07	1.9e-05	24.9	0.9	1	23	1772	1794	1772	1794	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGATGGAGCATCACACGGCGACTCGAGAGCCGCAGTAACAAGCAGCGTCGCGACATCAAGATCTGTCAGGCTGACCGTACTACTTCGCCTGGGTCCCGTGATATCGCCTACTCTCAGTATTCCGGGGAAGGAATCGAGTCCGGGTCAGACGGAGAAGAAAGTGCTGGAGGAGGCATCGTAGAAGGGGTAGAAGGaagtggcggtggtggtggtgttggTGGCGGTGAAGTAACAGGGGGTCCAGTCGACGAGGCCGTAGACCTTAGGCGATCTCATCATGGAGAGGAGGATGAGAGGGATCGAGAGGATTTGCCAATGgacgaggacgaagaggacgaggagggtGTCGAAGATCCAGGGGATcaagacgaggaggaggaaggaacGCGAAAGCAGGTGATGCGACATCGTCAGGATGCGGAGAACAACAACAGCTTTGTCGAAGGTGGACCACCAAGTGGGATCTTCGGTCCAGCTGGAGCAAGTCACGTGACCCTCGAGGCCCTCCAGAATACGAAAGTCGCAGTGGCGCAATTCGCAGCCACCGCGCTAGCTGGAGGTGCCGACAGTGAGGCGGCCCTTCAGGATTTGGCGCTGCTTCAGAGTACTCTCTACACCCTCCAGCATCAGCAGGTCTTCCAGTTGCAATTGATAAGTCAACTGCAGCAACAGCTCTCAATAACGCATGGTCAGCCGACGGTTCCGGGAACTCCAACTGGAACAGGGCTACCGGGTACGGGGGTGACTTCGACGACAACGACAAGTACGACAACAAGCACTAGTCATCCAGGTACTCCGTTCGGCAATGTCGGAGGTGCGGGCAGTGCTATCGGTAGTGGTACCAGTGCTGGTATTGGAGGTGGTATTGCACGTGTCGGTAGCGCTATGGGAGGTGCTGCTTGTGTTGATACTCGTGACACATCGTCGTCAACAGACAACAAGGAAGCATCACCCTCGCCAACGATTCACCCGAAGCCTCTCTCGGCCCTGACTTCGCCGCCGTCCTCCCGGCCACCGAGCCATCATCGACAGTCATCGCCAGGACTACTCCAGTCACAGAGTCAAGAACGAAGCACTCCCTCAGCCAGTGGTGCTGGTAGTGGTGGCAGTACATCGCCATTGAGCCTACCGCTGCCGTTGTCGCTCTCGCTTCCGTCGTCGGCAGCAGCGGCAGCGGCGGCAGCTGCTGCAGCCGCAGCAAGTCAAATGTCCCTCTCCCATCAAATGCCGCCTCTCTGCTCGATAAGCTCCTCACTGGCCTCGTCGATCATCACAAACACGGACCCGCCGCCCCTTCACGAGCCCAACACCCTGGAAATGCTACAGAAACGAGCGCAGGAGGTGCTCGACAATGCGAGTCAGGGCCTCTTGGCGAACAATCTAGCCGATGAGCTCGCGTTCAGGGGCGGCAAGGGCTCACGACTGTCACCCTACGATTCGAAGTCCTCTGGTGGGCGCGGCGAGCCCTTCTTCAAGCACCGCTGTCGCTACTGCGGCAAGGTCTTTGGCAGTGATTCGGCGCTCCAGATTCACATCCGGTCCCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAAGGAAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAGTTTCCACACGTTAAGATGAATCCGAATCCCGTGCCCGAGCACCTTGACAAGTACCATCCCCCCCTTCTCCAGCAGCTCGCGGCTTCCGGGCAAAGGCCCTTACCGTCcccgccaccgccaccgccgccgccgccgccccCGCCACCGCCAGcgtcgtcctcctcctcctcgtcgtcgtcgccatCATCGTCGTCGCATCATCCGTCGTTGTGTCACCCTGGCtccgcagcagcagcagccgccGCGGCCGCCGCCGCAGCAGCTCATGGTTTCCTTCCCCCTCAGCCACCGTTACCTCTTGCTCTAACCCTCCCTGTAATTCCGCCCCTTTACCGATCACCCCTCCTTAATCACAGGGAGGAACAAGAGGTTCCGGAGAATCTCAGTAAGACTACTGTCCCGTCTCCTCACACATCGCCTCCTGTACCAACGGGACATCATCATCTCCCTTTACCCGGTTCCCATCATCCTCACCTTCACCATCAATCGAACTCGCATCATTCCTCCTTTCACGAGCATCATCAGATgaaacagcagcagcacctGCAACACCATCACGCTCAACaacatcatcttcatcatcacGAGCAGAGTACCTCGATAGCATCCTCGGCCGCGCAAAGAGACGAAATTAAACTAGAACACCAATCACCTACTCAAGACTCGTACCAACAACAATCACGACCAACGAGTCGAGAAGATTCCGAGAGGATAACGCCGAAGCGAGAACCAGAGGATGCCGAAGAGCAACCCGAGGACGAAATAGAGGAGTACGAGGATAGTACCCGGAGATACCTGAACAACTCGTCACCATCCTCGACGGCGAATCCTCCGTCACAACCACAACCTTACGAGGATTGTAGTATGGACAGTAGTAAAATGAGTGCCCGACTTGAGgctgaaaatgaaatagaCGGAGACGGGGATGAAGAGATGGAAGAACAGCCAGAGAATCTCTCAGGTCGCGGTACTTCGAGTAGACTTGGTCATCAGAGTCTCGGCTATCCTGGTGCTTCTCCTGCAAGTAGTAGTGCCAGTAGCAGTAGCCTCCAAACGACCTTCGCGGGAATTTTATTTCCCACGGGGCCACCACTACCGCCAGTGACTTCGTCCTCCGCCTCGACGATTCATCATCCTCAGCTGATTCACCACGTCTCGTCCAGTGGTGGCGGCACTACTCCCACTGCACCTGGATGTGAAATGATCGTCGATCCTGCCCGTGATCCTGCCATATACTCGAGTCTACTTCCACGACCGGGGAGCAATGACAATTCCTGGGAGAGTCTTATCGAAATTACCAAAACCTCAGAGACGTCGAAGCTTCAGCAGCTCGTTGACAACATCGAGCACAAGTTGACGGATCCTAATCAATGCGTCATCTGTCACAGGGTACTCTCCTGTAAGAGTGCACTCCAGATGCACTATCGTACTCATACAGGCGAACGGCCATTTAAGTGCAAAATATGTGGCAGAGCCTTCACCACCAAAGGCAACCTTAAGACTCACATGGGGGTGCATCGAGCGAAACCACCTCTCAGGGTGCTTCATCAATGTCCGGTATGTCACAAAAAGTTCACAAACGCCCTGGTACTTCAGCAACACATACGACTTCATACGGGAGAACCTACGGATCTCAGTCCGGAACAGATTCAGGCGGCTGAAGTTAATGAATTTCCCCCTGGTTATCCACATCATCCTCTGGCGTCGTTTCTACCCCAGGGATTCCCGGCGCTTCATCCTGCAGGGAGTGGGTTCCCCTTGGGGTTCCCAGGTTCTCGCCAGCACATAGCCGAAAGAACGCCTCATGAGAATGACCTCGACTCAAAGGACTCTCGAGAACATCTGCATCACCCGCTTCTTCCctctcatcatcatcatctgtCGCACCAACAGAATGCTCAGCATCACTTGCAACTGCATCAACAACACCAAAAGTACTCAGAAGAGCGGAGCTCCACCGCAGGTGATGATGAAATGGCTGaagatcaagaagaagaggatgacaTCACTCGAGAAGATGATGAGAGGTGCGATGAACGGGAGAGGCGAAGTATGGAAGAGGCTGAAAATGATCCGGAAAGAGACGAAAACGAAGAggagcatcatcatcatcatcatcatcatcaacagCAACCACGGCTGTCGCTACCAAGCTTTTCGACGTCTCTGGCGGCCCTCGAGAATCAGGTGCGAACGATCACGACGACAGTGGCTGGTGGTAGCTCCAGGTCACCTGGACCCCACCGATATAACGGAAGTGAAAAGAGCACCAGTCCCTCGGCGATACGAAATGGAAGCGGCGGTGTTCCGCTTGACTTGACCCCACGCTCTTCCTCGACCCCGGTGGGTGGCTCGACGCCTACCCCGACGCCGCCGTCCCCACCGACAGCAGGAGCATCCTTGGCATCGCCATCCGCCTCGTCACAGAGCACAGCGCATCACGCGCATGCTTTCGGAATGTTCGCAGGCCTTCTTAGGGCGGTCTCATCGCCACCGTCGAGTCTCGGTGGTGGCGGCGCCAGCGGCATTGgcggtagcagcagcagcactcCCAGCCTATCCGGTACAACGTTAAACAGCGTAGTCTCGATGACCGCTGGCAATCCAGTCCTCGACGAAGGCGTCGGTAGCGTCGTTGGTGTCAGTGGCGTCGGCGGTGTCGGTGGCAGTAGCGGCGGCGGGGGCGGTAGCGGTGGTGGCGGTGAAGGTGCAGGTAGCAGCACTACCGCCACCACCGGAGGAGCACTTGCCTCTCTAACGACGTCAGCCGTTCTCGCTGCCACTTCTACCTACAATCCCCTCGGCCTGGCTGTCGGAGGGCCAGCAGTCCGCGGTAACACGACATGCAATATCTGTTACAAGACGTTCGCTTGTAACTCGGCCTTGGAGATTCACTACCGGAGCCACACGAAGGAACGACCGTTCAAGTGCACCATTTGCGACCGGGGCTTTTCCACGAAGAATGAACGCGAACCCTGGTTGACGAATACGTGTACCTGTGTCGATCGGAGGAACTCCCTATCCAAGACCGGCACCGAGTCCACTAGCACCACTAGCACGACTAGCACCACTATCACCAACATCCCTTCGTCCGAGTCGCATGGCGGCAATCGGACGAGGCCGAAACGCAGGCGGCGACGTCCTGAGGAGAGGAAGCCCCGGGGGCGGACTGGTGGCAACGAATGGGGGCGGGGAGTGATCTCTGGCTACGCTGCTCTCCACCTGCCCCCGATGCTGCCTCCCGCCCTCGGACTTCTCGCCTCGGACCACGTCTTCCTGGGAAACATGAAGCAGCACATGCTCACACACAAGATCCGGGACATGCCACCTCACCTCTTTGCCGATGCGAAACAGACGGgtcagcaacagcagcaacaaccaCAGCAGCAGGATCATGAGAACTCGAGGAGTCCTATGTGCGCGGATGAGTCGAGTCTACCACCTCCagcacctccaccaccaccaatgCCACCGTCGTCCGTAGAAGCTGTAGTAGCAGCCGCGGCGATGCCTGTCAAGAGATCACCACCCGAGGGTGATTTACCCGCGCCCAAGAGGCCGCCCAGCATGCCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCTTCGGCGCTCCAGATCCATATGAGAACACATACGGGCGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAACCTCAAGGTGCACATGGGAACGCATATGTGGACGAacggagcgtcgcgacgaggTCGGCGAATGTCATTGGATCTACCGCCACTGCCCATCACACCCAAGGACTCGGAGTTTCTTCAACGACGACCGGATCTCTTTTATCCTTATCTACCCGCGCCGTTCCTTAATGGCGTTCAGCAAAAACTGAACGAGATCTCGGTCATACAAAGTAACAATGGACTAACATCGCCACATAGCGCAAGTGCAGCCAAGTACGCTGGTCTCTTTGGATCAGTTTATGGAGGTGGCGGTATCGCTGCGGGATTCCCTGTTGACAAACAGCCGATGGCACCGAGTAATGGCTCCCTAGGAGAATCGAAATCTCTATCAGCAGGGTCCATGCTCTTCCGCACACCATCTCCATCTCATTCACCTGGCACTCCGTCGTCGAACACGGGCAATCAGAATTCCGCCAGTGTACCATCCTGGGGAGGTAGCGATCCGCTGCAACACAGATTCGAGCGTGAAACTTCGTCCAGGACGGAGGAGAACGCGACTCCGCCAACGGCAAGACTACCACCTACGCCGGCGCCAAGAGGAGAAGGTCTGGCAGCCTAG
Protein Sequence: MQLMRWSITRRLESRSNKQRRDIKICQADRTTSPGSRDIAYSQYSGEGIESGSDGEESAGGGIVEGVEGSGGGGGVGGGEVTGGPVDEAVDLRRSHHGEEDERDREDLPMDEDEEDEEGVEDPGDQDEEEEGTRKQVMRHRQDAENNNSFVEGGPPSGIFGPAGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQPTVPGTPTGTGLPGTGVTSTTTTSTTTSTSHPGTPFGNVGGAGSAIGSGTSAGIGGGIARVGSAMGGAACVDTRDTSSSTDNKEASPSPTIHPKPLSALTSPPSSRPPSHHRQSSPGLLQSQSQERSTPSASGAGSGGSTSPLSLPLPLSLSLPSSAAAAAAAAAAAAASQMSLSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSSGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPPPPPPPPPPPASSSSSSSSSPSSSSHHPSLCHPGSAAAAAAAAAAAAAHGFLPPQPPLPLALTLPVIPPLYRSPLLNHREEQEVPENLSKTTVPSPHTSPPVPTGHHHLPLPGSHHPHLHHQSNSHHSSFHEHHQMKQQQHLQHHHAQQHHLHHHEQSTSIASSAAQRDEIKLEHQSPTQDSYQQQSRPTSREDSERITPKREPEDAEEQPEDEIEEYEDSTRRYLNNSSPSSTANPPSQPQPYEDCSMDSSKMSARLEAENEIDGDGDEEMEEQPENLSGRGTSSRLGHQSLGYPGASPASSSASSSSLQTTFAGILFPTGPPLPPVTSSSASTIHHPQLIHHVSSSGGGTTPTAPGCEMIVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPHHPLASFLPQGFPALHPAGSGFPLGFPGSRQHIAERTPHENDLDSKDSREHLHHPLLPSHHHHLSHQQNAQHHLQLHQQHQKYSEERSSTAGDDEMAEDQEEEDDITREDDERCDERERRSMEEAENDPERDENEEEHHHHHHHHQQQPRLSLPSFSTSLAALENQVRTITTTVAGGSSRSPGPHRYNGSEKSTSPSAIRNGSGGVPLDLTPRSSSTPVGGSTPTPTPPSPPTAGASLASPSASSQSTAHHAHAFGMFAGLLRAVSSPPSSLGGGGASGIGGSSSSTPSLSGTTLNSVVSMTAGNPVLDEGVGSVVGVSGVGGVGGSSGGGGGSGGGGEGAGSSTTATTGGALASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKNEREPWLTNTCTCVDRRNSLSKTGTESTSTTSTTSTTITNIPSSESHGGNRTRPKRRRRRPEERKPRGRTGGNEWGRGVISGYAALHLPPMLPPALGLLASDHVFLGNMKQHMLTHKIRDMPPHLFADAKQTGQQQQQQPQQQDHENSRSPMCADESSLPPPAPPPPPMPPSSVEAVVAAAAMPVKRSPPEGDLPAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLTSPHSASAAKYAGLFGSVYGGGGIAAGFPVDKQPMAPSNGSLGESKSLSAGSMLFRTPSPSHSPGTPSSNTGNQNSASVPSWGGSDPLQHRFERETSSRTEENATPPTARLPPTPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00298578;
90% Identity: iTF_00253834;
80% Identity: iTF_00255335;