Basic Information

Insect: Calameuta filiformis
Gene Symbol: -
Assembly: GCA_030142265.1
Location: JARQSU010000636.1:232131-235619[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00013 0.0098 16.4 1.5 1 23 115 138 115 138 0.96

2 13 0.011 0.85 10.3 4.6 2 23 255 277 255 277 0.91

3 13 0.00089 0.067 13.8 1.7 2 23 334 356 334 356 0.95

4 13 6.4 4.8e+02 1.7 7.6 3 23 443 464 442 464 0.95

5 13 6 4.5e+02 1.7 2.9 1 23 514 537 514 537 0.94

6 13 0.00036 0.027 15.0 0.1 3 23 586 607 585 607 0.95

7 13 0.0038 0.29 11.8 0.2 2 23 634 656 633 656 0.93

8 13 0.0083 0.63 10.7 3.6 2 23 704 726 703 726 0.96

9 13 0.11 8.5 7.2 4.2 3 23 741 762 739 762 0.92

10 13 0.00021 0.016 15.8 0.2 2 23 807 829 807 829 0.93

11 13 0.053 3.9 8.2 1.6 1 23 915 937 915 937 0.98

12 13 0.00014 0.011 16.3 0.7 2 23 953 975 952 975 0.96

13 13 0.0049 0.36 11.5 0.4 1 23 1044 1067 1044 1067 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00013	0.0098	16.4	1.5	1	23	115	138	115	138	0.96
2	13	0.011	0.85	10.3	4.6	2	23	255	277	255	277	0.91
3	13	0.00089	0.067	13.8	1.7	2	23	334	356	334	356	0.95
4	13	6.4	4.8e+02	1.7	7.6	3	23	443	464	442	464	0.95
5	13	6	4.5e+02	1.7	2.9	1	23	514	537	514	537	0.94
6	13	0.00036	0.027	15.0	0.1	3	23	586	607	585	607	0.95
7	13	0.0038	0.29	11.8	0.2	2	23	634	656	633	656	0.93
8	13	0.0083	0.63	10.7	3.6	2	23	704	726	703	726	0.96
9	13	0.11	8.5	7.2	4.2	3	23	741	762	739	762	0.92
10	13	0.00021	0.016	15.8	0.2	2	23	807	829	807	829	0.93
11	13	0.053	3.9	8.2	1.6	1	23	915	937	915	937	0.98
12	13	0.00014	0.011	16.3	0.7	2	23	953	975	952	975	0.96
13	13	0.0049	0.36	11.5	0.4	1	23	1044	1067	1044	1067	0.98

Sequence Information

Coding Sequence: ATGACGTCCACACTATCGCGCGGTGCGATCCTGCCTGATCCTGGCGAGCTGGACAGCGACGGTTCGAGCGGAGAAGAGCGGGACGCCAGGAAGCGTCTCCATGGCGACCTGGACAGCACCGGTCCGAAGAAGCGACGGAAACAGACGACTCCGGTGAGGTTCCCGGTGTCGTTGATGACTGGTGAACGAGCGGAGTCCGAGGACGACGGCGAAGACGAGGAGGCGGAGGTCGAGGAGGACGTCGAGGCTGAGCGGGAAGGTAAGCAGCAGCGTCGTTCTTCCCAGGATTCGGTCACCGGTGATCATCGAGTAACGAGCAAGGATGAGAACCTGAATAACGAATTCCGCTGCCAATATTGTAgtcaatttttcgataacaAGGAAACTTTGAATCAGCATATAGATAGCGAGCATTATGTACAGTCGCGAGACCAAGTGCAGGTTAAGTTAGAGCCGAACCAGGAGCAGTCCGAGAGTCCAGTCAATCTGTCGGGACTCAGTATAAAGAGTTTCGCAGCATCTTGGTTGTCGGGTCAAGTTCAAGGTCAGCCACCGGGTCAAGTTCAGATACAGAGCGAAGACTGGACAGTCGGTAATACAGTGGCGCCCGTGAGCACGATACCAAATCATCTCCAGAGTCTACCGTTTCCTGGTGCCCTGGCGCAGTATCTTCCTCTACCTGGTTTCTCGCTACCAGACTCGAGTCAGATGTCAAGACCACCCATAGGCCCGGCCCCGGTACGAATATTCAATCCGGACGCCTACTGCGACCTCTGCAACAAGGAGTTCTGCAACAAGTACTTCCTGAAGACACACAAAGCGAACAAGCACGGCATCTACGTGGACTCGCCAGGTCAGCCAACCACGGAATCCAATCTTGGTCCACCGGTTTACGGTGGGATGTTCACTGCTGCCAATATTAAGATGGAACAGATTCAGAGGTTAGACGTTGCAGCggtgccgccgccgccgccgccgtgcATACCGACGCTTACCGCCTCCTGCGACGTCTGTCAGAAGAGGTTCAAGAACGAAGAGTCCGTGAGGAAGCACAAGCAAAAGGTTCATTCCGAGAGCAGCGAGCCTGGTGAGAATCAGCCGATGCAGCCGCCATCCGTCGACGATGACCGGGACCAGAGTTATCACAGCTTAAGCCCAGGAGCTATGGAAGCACTTTTCAAGCAGGAGTTCGGCGTGGAACAGGAAGACACGAGCTTCATGCCGGCGCCTAGACACCTGTCGCCCCAGTCGATTCAGCAAGCTAGGGATTCAGGTTTCAACGCGGATCGTCTACGTAGACTAGGTGTTATCAACCCCGATGCCTTCTGCGAGATTTGCTGCAAGGAATATTGCAACAAGTACTTCCTGAGGACGCACAAGATGAAGCGCCACGGTATCTACATCCAAGACAGCGAGAAGTCACCCAGCAACCCTGGAGCGGCCGCCAGCTGGCACCAGGTGCAAACCAGTCCGCTCAACCTGATCGTAACCGAGACGACCGGAAACAGTTCAGAGTCCAGCGATCGACCTGGCGAAGAGCACGAGTGCAAGCCTTGCGGACTAAGATTTCAGACAAACGGATTGCATCAGGCGCATAGGCAGAAGATGCACGAGATCGAAGAGCAAAGGTCACCCAAGCAGGATTACGAGGTCGAGATCACGGATCAGCGACCTGACTCCATTTCCGAAGATCTTCAGAAACTCCAGACAATGATTCTGCAACTGAACGGTTTGGAATCCAGTCGCGGTGCACCCTGCGCAGTCTGTGGAAAAGAATTCGAAACCCGATTGGCTCTCAGGACTCATATGACCAGCGATCACGGCGCCATCATCGAGGAGCCAACGTCACCGTGTCCGGTGACAGAGAAGTCGCCGACGCCTATTGGCGGGACCGTCGTGAGCTGCACCGTCTGCGACAAGGAATATCTCAATCAAGATCTATTGAGAAAGCACATTAGCGAGGAACATCAGAATCAAAATCAGAATTCTACACCGGCGACGACGCCGCTTCCCCAGGCGGTGCCAATTCCTGTAACTACCACTCCGACGTCGGCGCCAGCGGCGCAGACCGAGCGCAAGGCGTCGGTGTCCATGACGCCAACGTCTAGCTACTGTGAGATATGCAATAAGGAGCTGTGCAACAAGTACTTCATGAAGACTCACATGCAGAGGATGCACggtattgaaattgaaaatggcgcCCAGATCGGTGGCGttatatgcaatatatgtaACAAGGAACTGTGCAGCAAGTACTTCCTCAGGGTTCACAAGCACAACACGCACGGGATCGTCGAAGAGGGCACTTCCGGTTCGACGAAGCAAGAATCTTACGAGTCCTCGAATAGCGAAGACTCGGCCTTGAAACCCGAACAATTAGGCGACCTGAGTCACAGATACTTCACCCACTTCACCGAAGTGTGTCCGATATGCAGCAGAAGATTTAGGagtacaaaatggctgaaggCTCATCTACTGGGAGATCATGGGAAGGCAGGAGTGGACAAATGGCGTGAATTGGAACAACAGTACCAATCGACACCGCGAGGTGggaccagcagcagcagcagtaacAACAGATCAGCAGGACCTTCGAGATCTACGCATCAGAACTCTAGCCTAAAAATACCAAACGGCCTGGAACTGGGTCAGCACGTTAAATCTACCGATTACACTGGTCTTGGCAATCAGGTACTGTCCAACTTATTCGGTTCCGGTTCCGAGGATCAGCAACTCAAGAGCTACAGGTGTTCCTACTGCAACTTCACGACGACGGTGCTGCCATTTTTGTTCCTTCACGAAAGATCTCACGTGAGTCCTCAAGGCGGAACTGGCCTGGAAAATGACAGGGGACTCCAATGTCCGATTTGCTCCCAGGGATTTCCGCAGCCTGAACTCCTGCACCATCATCTCCTGACTCAACATCAGTTTCCTGGACTGCTCACGCAATTCCAACCACCGACGCTGAACAACATCAGGCCTGAATTGAGCGTCGATAAGCATCAAGTTGAAACGAAGGATCAGGATCAGAAGGAGGAGCGTCGGCAGAGTAGTCCTCAGACGTCATCAAGTTTGGAAGTTAAACAGAAAACTGAGGAACCCGCGGTTCAGGTGACACCTCAGGGCGCCTACAAGTGCGCCCAGTGTGGCTACGCTACTGCCAACCTCAATAGGATCAAGAAGCACATCAGGAAGGATCACAAGACCCTCGGCGATCCAACCGATAGCGTGATAACGGAACTGAGCAGGACTCTCAAAGACGTCGCCAACAAGCACAAGGTGCCAGCCAGTTACGCGATGCCGCAGGACATGAATTCGAATCCCGACAAGGCGATAATGCAGCCGTTCCTTATAGAGGAgtgcgacgtcgcgacgcccggcgaAGAATCAAGCTCCGAGAGACGCTTCGCGCCGGCCCTCATTTATTTGCCTGTTAAATCGCGCATAAACGGCCCCTTGACTGCGTCCTTTACATTGAGTCCCGCCTGA
Protein Sequence: MTSTLSRGAILPDPGELDSDGSSGEERDARKRLHGDLDSTGPKKRRKQTTPVRFPVSLMTGERAESEDDGEDEEAEVEEDVEAEREGKQQRRSSQDSVTGDHRVTSKDENLNNEFRCQYCSQFFDNKETLNQHIDSEHYVQSRDQVQVKLEPNQEQSESPVNLSGLSIKSFAASWLSGQVQGQPPGQVQIQSEDWTVGNTVAPVSTIPNHLQSLPFPGALAQYLPLPGFSLPDSSQMSRPPIGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGQPTTESNLGPPVYGGMFTAANIKMEQIQRLDVAAVPPPPPPCIPTLTASCDVCQKRFKNEESVRKHKQKVHSESSEPGENQPMQPPSVDDDRDQSYHSLSPGAMEALFKQEFGVEQEDTSFMPAPRHLSPQSIQQARDSGFNADRLRRLGVINPDAFCEICCKEYCNKYFLRTHKMKRHGIYIQDSEKSPSNPGAAASWHQVQTSPLNLIVTETTGNSSESSDRPGEEHECKPCGLRFQTNGLHQAHRQKMHEIEEQRSPKQDYEVEITDQRPDSISEDLQKLQTMILQLNGLESSRGAPCAVCGKEFETRLALRTHMTSDHGAIIEEPTSPCPVTEKSPTPIGGTVVSCTVCDKEYLNQDLLRKHISEEHQNQNQNSTPATTPLPQAVPIPVTTTPTSAPAAQTERKASVSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVEEGTSGSTKQESYESSNSEDSALKPEQLGDLSHRYFTHFTEVCPICSRRFRSTKWLKAHLLGDHGKAGVDKWRELEQQYQSTPRGGTSSSSSNNRSAGPSRSTHQNSSLKIPNGLELGQHVKSTDYTGLGNQVLSNLFGSGSEDQQLKSYRCSYCNFTTTVLPFLFLHERSHVSPQGGTGLENDRGLQCPICSQGFPQPELLHHHLLTQHQFPGLLTQFQPPTLNNIRPELSVDKHQVETKDQDQKEERRQSSPQTSSSLEVKQKTEEPAVQVTPQGAYKCAQCGYATANLNRIKKHIRKDHKTLGDPTDSVITELSRTLKDVANKHKVPASYAMPQDMNSNPDKAIMQPFLIEECDVATPGEESSSERRFAPALIYLPVKSRINGPLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00253103;
90% Identity: iTF_01474985;
80% Identity: -