Cind014987.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cacoxenus indagator
Gene Symbol
ftz-f1
Assembly
GCA_035041755.1
Location
JAWNKX010000619.1:3795517-3811673[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.97 1e+04 -4.3 14.6 53 132 130 199 121 207 0.38
2 3 7.8e-20 8.2e-16 58.6 1.2 1 78 368 446 368 468 0.73
3 3 3.7e-72 3.9e-68 231.0 0.7 157 408 533 777 507 779 0.91

Sequence Information

Coding Sequence
ATGTTATTAGAAATGGAGCAGCAACAGGGGACAGTATCATTTATATCGGCGCTCAATATGTCCCCATTCTCGATGCAATTAGAACAGCAACCGTCAAGTCCGGCGCTAGCCACAAATCAGCAaactgctggtgctggtggtagtggcagcggcggcggcggtgcCGGCGTCAGTGGCAATGGTGGCAATAATAGTGCAAATAAtccaaataacaataataacagcaatagcaacaacaataacaatgataaTGACACAAATCCTCTAAGCAATTCAGATACAGATTATGCCTCATATACGCTGCCTCAACTGGCTGGCAACAATAGTAccggcggcggtggcggtggtggtggcggtggtggcggctCTGgcagtcatcatcatcagcagcatcaccaccagcatcatcatcagcaacaacagcaacaaaaccaccaacaacactatcagcaacaacaacaacaacaacaacaacagcagcaacaacagcagcaacaacaacaaaatattgccAACAATTCAAATTTCTCGTATTCGTACATTTACAATTTCGACTCACAGTACATATTTCCGACAGGCTATCAGGATACCACCTCATCACATTCACAGCAgagcggtggtggtggtggcggcggcggtggctcGAGCCTGAACAGCGGCTCCCTGTTAAACGGTGGCAATGGCTCTGGTAATGCCGCCGCCGTCGCTGTCGCCGGCGGTgctggcggcggtggtggttaTATGTCTTTGCTGCCACCGTCGGCCAGTTCGAGTGGTGCCCATCTGGGCGTCGGCGGCACTGGCGTCGGTTCTGGCAGTGGCCCTGGTGGCACAAGCGCCACAGCTGGTGTGCCCGGTGAAGCCATCGATTTCAAGCATCTCTTCGAAGAACTGTGTCCCGTGTGCGGCGACAAGGTCAGCGGCTATCATTACGGCCTTCTAACGTGCGAGTCCTGCAAGGGTTTCTTCAAGCGTACAGTACAAAATAAGAAGATCTACACTTGCGTCGCCGAACGGACGTGCCACATCGATAAGACGCAACGCAAACGCTGCCCCTACTGCAGATTCCAGAAGTGCTTGGAAGTCGGCATGAAGCTAGAAGCTGTGAGAGCGGATCGCATGCGCGGTGGCCGCAACAAGTTCGGTCCGATGTACAAACGTGATCGGGCGCGAAAACTGCAGGTGATGCGACAGCGTCAATTGGCACTGCAGGCGTTGCGCACGTCGATGGGCACGACGGACATGAAGACGACGCCACTCTCGCCAGGCTACCAACAAGCATATCCAAACATGAATATTAAGCAGGAAATTCAAATACCTCAGGTATCCTCACTCACACAATCGCCGGATTCATCGCCTAGTCCTATTGCCATAGCGCTGGGTCAGGTGAACGCCAACTCGGGCGGTGTGATAGCGACACCGGTGAATGGCAACAATGGCTCTGCCGGTGGTGGCGGCAATGGTGGCGGCGGTGGAGGTGGCGGTGATATCATCAATCgcggcggcagcggcagcaacagtTGTCATGACGCTGGCACAGGATCTCTACAAAACACGGCCGAATCGAAATTGTGCTTCGATTCCGGTACGCATCCATCGAGCACCGCCGACTCACTCATCGAGCCACTGAGGGTATCACCAATGATACGTGATTTTGTGCAGTCCCTCGATGATCGAGAGTGGCAGTCGTCATTGTTTGCGCTGCTGCAGAAGCAATCGTACAATCAGGTCGAAGTGGATCTCTTTGAGCTGATGTGCAAAGTGCTTGATCAGAATTTGTTCTCGCAAGTGGATTGGGCAAGGAATACGGCATTCTTTAAGGATCTAAAGGTTGATGATCAAATGAAGCTGCTGCAACACTCATGGTCGGATATGCTTGTGCTGGACCATCTGCACCACCGAATACACAACGGTCTACCCGATGAGGCGCAACTGCACAATGGGCAGGTCTTCGATTTGCTGAGTCTGGGTCTGTTGGGCGTGCCAGAGTTGGGCGATTTCTTCAGGGAGCTGCAGAACAAGCTGCAGGATTTGAAATTCGATATGGGCGACTATGTGTGTATGAAATTCCTAATACTATTGAATCCAGATGTGCGCGGTATTATCAACAAGAAGACCGTCTTGGAGGGCCACGAAAATGTGCAGGCGGCGCTTTTGGATTACACGCTCACCTGTTATCCATCTGTGAcggaTAAATTTCGGCGGTTGTTGAATATGCTGCCGGACATACATGCGATGGCTGCGCGTGGCGAGGAGCATCTCTACTCGAAACATTGCGCCGGCAGCGCGCCAACGCAAACGCTACTCATGGAAATGTTGCATGCCAAAAGGAAAGTGTAA
Protein Sequence
MLLEMEQQQGTVSFISALNMSPFSMQLEQQPSSPALATNQQTAGAGGSGSGGGGAGVSGNGGNNSANNPNNNNNSNSNNNNNDNDTNPLSNSDTDYASYTLPQLAGNNSTGGGGGGGGGGGGSGSHHHQQHHHQHHHQQQQQQNHQQHYQQQQQQQQQQQQQQQQQQQNIANNSNFSYSYIYNFDSQYIFPTGYQDTTSSHSQQSGGGGGGGGGSSLNSGSLLNGGNGSGNAAAVAVAGGAGGGGGYMSLLPPSASSSGAHLGVGGTGVGSGSGPGGTSATAGVPGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKIYTCVAERTCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRTSMGTTDMKTTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNANSGGVIATPVNGNNGSAGGGGNGGGGGGGGDIINRGGSGSNSCHDAGTGSLQNTAESKLCFDSGTHPSSTADSLIEPLRVSPMIRDFVQSLDDREWQSSLFALLQKQSYNQVEVDLFELMCKVLDQNLFSQVDWARNTAFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDEAQLHNGQVFDLLSLGLLGVPELGDFFRELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIINKKTVLEGHENVQAALLDYTLTCYPSVTDKFRRLLNMLPDIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01363997;
90% Identity
iTF_00251405;
80% Identity
iTF_00251405;