Cind006201.1
Basic Information
- Insect
- Cacoxenus indagator
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035041755.1
- Location
- JAWNKX010000216.1:464203-469653[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.15 3.1e+03 -2.6 1.3 42 75 20 53 7 59 0.67 2 3 8.3e-115 1.8e-110 369.2 27.6 1 299 247 545 247 546 0.91 3 3 0.076 1.6e+03 -1.7 4.1 216 245 571 599 549 619 0.50
Sequence Information
- Coding Sequence
- ATGCCTGCAAAACGTGGAAAGGCCAAATTGACAACGTCGACTCGGTCAGCCTCGAAGGGAGAGCAGAACAACAACGTAAACAAAGCGGCGAAAATGAAAGCTCCATCGGTCGAGTTGAGTACGTCGGCTGCAATAACAAGATCGAAAAGTAGCGATGAAGTCATCGAAGAACCCAATTTCAATTATGTTTGCGGCCCATTAGTTTTGAACGAAATTGAGGCTGAAGGGCCACGGGAAACTCCAGCTACCACGATATATGCGGTATCGGTAGCCGATGCAGCCAACGCAAAGAACGGCAGCGCTTTGCAAGCCGCAACTAAGTCATACGATGATAAAAGCGATGATAGCTTGGGCACGACAACAAACGTCGATCAACCAATAAAAATCACAAGTGCTGAGGACAGTAGTGAAGTAGGGAATAATGCAAGAACAACAGATAATACAAATATTGAAGTTGATTCGAATGTGCCATTTAACGCTCCCTCCTCTGTGAATACTACCATCGCAGTTGATGAATACCAGAAGCCAGAATCGCCGGTAACGGTGATCGCTGCCATGGAAGCGGATCAGGAATGCAGTGGCCAACTGAAGGACGCAAACACATTGGCCACAGCCTCGGCTGCTGGTGATGCCAGTACAGATTTCAAACATGAGAATGTGGAGGAGGAAGTAGACTGTGAGGAGAATCCACCTGAAGACGAACTATTGGTTCAGTTGTTGGGCGAGGCAAACCGCATTGCCGAGGCACGTTTGGCGGCACGACGGCAGGCGCGCGCCGAGGCCCGGGAGATACGCATGCGAGAATTGGAGCGCCAACAGAAGGAGCAAGAACAGAATGCCGATCGTGTCTTCGACATGCACAATGTCGGTGGTGTCTCGAACAACGATGCGCTGTCACGCACCCGCCTTTCATCTGGTGTGCCGTCGGTTGGCGGGGTGCTGAGTGCAACGCGCATCGTCAGCGCCAGTTCGATGTCGTCACGACGCAGCAGTGAAGACTCACTCGAGGAGGAGGGTCGGAGTCTCCGAGACATTCGATACGAGTTGAAGGACGTTGAAGAGCGATTTCGCAAAGCGATGATCGCCAATGCCCAGCTTGATAACGACCGTGCCTCACAAACCTACGAAGTAAAACTGCTTAAGGACAAAATCGAGACAATGCAGGAGTCGTATGCGCAACTCGAAAGGGAATTCAAAGATAAATCTCGGGACTACAATGCGCTTAAACGCAACTTGGATCGGTTGACGCTGGAACTAAAGCTGGTGCAGGGACAGTTGAATGAAAGGGACACACTAATTGCAGAACAGGGTTTAGTGATTGTCGCCGTCGAGAATGCCGACGGCACAGATGCCAAGCGTGCTCTAGTCAGTATGGAAAACGCAAATGTGCTGGCCTCAGTACAGGGTTCCTTAGATGTGAGACTCAAAAAGTTCAGCGAGGAGAAGCAGCAACTCGTCAGCGAAGTACAAAAACTGCAAGAGCAACTGGAGAACTGCAAGAGCGAGGGCAAAGGTCGTGGCAATTCCTTGAACGGCCCATTGGGGTCCGATGAAGATTACGAGGCTCAAAgagaagcaaataaaattatatcgGACTACAAATACAAGTTGCAGAAGGCTGAACAGGAAATCGCAAGTCTGCAGGCGAGTTTAGCACGTTCAGAGACGCAGGTCATACGCTACAAGAGCACAGCGGAAGCGGCCGAAAAAGCCGAGGCCGAACTAAAAGTCGAGCGAAGGAAGCTGCAGCGTGAGAATCGCGAAGCAATGGAACGCCTCGAGGAGCTGGAAACATCAAACAACCATCTGCTGAAGCGTTTGGACAAATTGAAGAATGCGAAGAGCGCCCTACTGAAGGACCTTTGA
- Protein Sequence
- MPAKRGKAKLTTSTRSASKGEQNNNVNKAAKMKAPSVELSTSAAITRSKSSDEVIEEPNFNYVCGPLVLNEIEAEGPRETPATTIYAVSVADAANAKNGSALQAATKSYDDKSDDSLGTTTNVDQPIKITSAEDSSEVGNNARTTDNTNIEVDSNVPFNAPSSVNTTIAVDEYQKPESPVTVIAAMEADQECSGQLKDANTLATASAAGDASTDFKHENVEEEVDCEENPPEDELLVQLLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHNVGGVSNNDALSRTRLSSGVPSVGGVLSATRIVSASSMSSRRSSEDSLEEEGRSLRDIRYELKDVEERFRKAMIANAQLDNDRASQTYEVKLLKDKIETMQESYAQLEREFKDKSRDYNALKRNLDRLTLELKLVQGQLNERDTLIAEQGLVIVAVENADGTDAKRALVSMENANVLASVQGSLDVRLKKFSEEKQQLVSEVQKLQEQLENCKSEGKGRGNSLNGPLGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -