Bhed009885.2
Basic Information
- Insect
- Byasa hedistus
- Gene Symbol
- Hr39
- Assembly
- GCA_029286795.1
- Location
- JAGSMW010000014.1:1702616-1712421[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.61 4.8e+03 -2.6 1.7 82 152 118 191 55 236 0.43 2 4 4 3.1e+04 -7.3 9.1 98 154 269 327 197 364 0.59 3 4 1.2e-07 0.00094 19.5 0.1 1 20 445 464 445 473 0.91 4 4 4.6e-65 3.6e-61 208.6 0.0 164 408 507 760 469 760 0.83
Sequence Information
- Coding Sequence
- ATGAACACAACAATGACGAGCGAGGGTGACGCGGTGAAGGTTGAAGGGGGACACGTATCTGTCACCACAATCAGCATGTCGGGCCCGGAGACCAGCAACGGTCAATTCTCGTACAGTTCGAGCGGAGTACGCATCAGCGTGTCTTCGGACCCACACGACGAAGACTCAACTGATGCCGAAATCTCCAAGATCGATTTCGCGCAACACCAATACGAGgtTAATATGCGTAACAAAAAGAAGCGATCGTCGAGCGGCGCGCAATGCGACGGACAGAGCAACGAGAGGGAGCGCCCCATGTCGTGGGAGGGAGAACTTTCCGACACCGAAATGGTCATAGACACCAGCGTCAATAACGACGAGAATAGCAGTTCAATAGATATGCAGTCTTCTCGTGATTCAATAGACACGCTGCGGAACGTAACAATCAAAACTGAACCCCTTAAGACGGAGACTTTTCACAGCTTGGACGACCAGCGAGTACTGGACCTCAAGTACTCAGCACCGTTACAATCGCATCAAAGGAGTCTCAGTATGAACAGGATATCAGTTCTAACGGACAATACGTCCTTGTCGCTCTCCCGACGGCCGTCGTCTCCTACGAACAGCGCCAAGTCCCTGGTACTGACCGATCAGACGATGTCGCTGATGGCGCCGAACGCGGTAGGCGAAGCACAAAATCTGACCATTAAGAAGGAGACGCAATTATCAGagttAAAATGCGAGGCGGGAGTGGGCATGGAGAAGCTGCTGGGCCTGCACGGGTCGCCGCTGCTGGGGCGGCTGCCGCGGGTGCAGTCCAGCGCGAGTACCGACTCCGCTGTTCATTCCATGTACACGCATAGCGTATACAGCAGTCCTTCAGCGAGTCCACGTCCAGCACGACACTACACGCCATCACTGTCGCGGAACAACAGCGACGCATCGCATTCGTCTTGCTACTCCTACAGTTCCGAGTTCTCGCCTACCCATTCACCAGTGCAGCAGAGTCGCCAGCCACACATCGTGTACCGCGACGCGACAGCCGTCTTCCCAGCGTCGCCCGCGCACGACGACGATACGGACCCTGCCGACGAACGTCTCCACCACCACCAGGGCATCAGTCGGCAGCAGCTCATTAACAGTCCGTGCCCCATCTGCGGCGACAAGATAAGCGGTTTCCACTACGGTATATTCTCGTGCGAGTCGTGCAAGGGTTTCTTCAAGCGGACCGTGCAGAACAGAAAGAACTACATGTGCCTGCGCGGCGGCAATTGTCCGGTCACCGTGGCGACGAGGAAGAAGTGCCCGGCGTGTCGCTTCGACAAGTGCCTCGGTTGCGGCATGAAGCTTGAAGCGATCCGCGAGGATCGGACTCGCGGCGGTCGATCGACGTACCAGTGTTCGTACTCGCTGTCTGGAGCTGCGTCCACGGGTTCGCTGCTCtctgcgcacgcgccgccaACGCTGCGCCACGCCTCCAGCCTCACCTGCGTTAATGGTCCAGGATCATACAGCAGTCGAGGGGAAGCGAGTAACAGCCGGTTGACACCAGACATTCCTCCATTATTGCAGGAAATAATGGACGTGGAACATCTCTGGCAGTACAACGAATCGGAACTAAGCCGTTTGGGCAAATCTACGGGTGCCAACCCACTGCTGGCCGCGAGCGGGATCACGCCTCATACCTCTAGTGCGGATCTACTAGCAGACCTGTGTCATATCGCAGACCATAGACTGTACAAAATAGTCAAGTGGTGCAAGAGTCTgcctttgtttaaaaacatatcgatcgACGACCAGATCTGCCTGCTAATCAACAGCTGGTGCGAACTGCTGGTGTTGTCATGCTGCTACCGCGGCGTTAGCACGCCCGGTGAGGTGCGCGTCGGCGGCGGACGCGGCATCACCCTGCACCAGAGCGCCAAATTCGGTCTCACACCGTGTATAGAGCGCATGTTGAGCTTTACCGATCACCTGCGGCGGCTGCGGGTGGACCGCTACGAGTACGTGGCGTTAAAAGTTATCGTACTGCTCACTTCAGATGCGCCGGAGTTGCGTGAAGCAGAGAAAGTGCGAGCATCACAGGAGAAAGCGCTGGCGGCGCTGCAGGCGTACACCGCTGCGCACTCGCCGGACACGCCAGCCAAGTTCGGCGAGCTGCTGCTGCGTATACCGGAACTGCAGCGCACTTGCCAGTTCTTCATGCAAGTCGGCAAAGAAATGCTCAATCCAGCAAACAAGAGTAAAGATGGCGACGGGCCGAGTTTTAATCTACTTATGGAATTACTGCGAGGAGACCACTGA
- Protein Sequence
- MNTTMTSEGDAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFAQHQYEVNMRNKKKRSSSGAQCDGQSNERERPMSWEGELSDTEMVIDTSVNNDENSSSIDMQSSRDSIDTLRNVTIKTEPLKTETFHSLDDQRVLDLKYSAPLQSHQRSLSMNRISVLTDNTSLSLSRRPSSPTNSAKSLVLTDQTMSLMAPNAVGEAQNLTIKKETQLSELKCEAGVGMEKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPARHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQQSRQPHIVYRDATAVFPASPAHDDDTDPADERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAPPTLRHASSLTCVNGPGSYSSRGEASNSRLTPDIPPLLQEIMDVEHLWQYNESELSRLGKSTGANPLLAASGITPHTSSADLLADLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKFGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00958006;
- 90% Identity
- iTF_01139641;
- 80% Identity
- iTF_00249781;