Bhec001805.1
Basic Information
- Insect
- Brenthis hecate
- Gene Symbol
- ffmA
- Assembly
- GCA_951806755.1
- Location
- OX638250.1:903736-916249[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.8e-09 7.4e-07 29.3 0.0 4 36 186 219 183 222 0.92 2 5 0.049 20 5.5 0.0 2 31 617 646 616 649 0.84 3 5 2.8e-08 1.1e-05 25.4 0.0 9 39 712 742 705 747 0.86 4 5 7.8e-08 3.2e-05 24.0 0.0 5 40 796 832 792 836 0.83 5 5 6.4e-09 2.6e-06 27.5 0.0 1 37 852 888 852 891 0.93
Sequence Information
- Coding Sequence
- atgaattaCGAAAATCATATTACGTTTTCTGAATATTTGTGTAGATGCAAGTGTTGTTTAAATGATAATGACTTGAAAAGCTTGTGGGAAGTTTATGAGTGTGATGATGGCACAGAGGAAATTTATGGACAAATGGTGGTTGATTGTTTCGCTTTACCGtggtaTCCGACAGACGAACCTGAACACATTTGTGAATTTTGTGTTTTAAAGCTTCGTGAAGCTTTGATTTTCAAGAAGAACATCTTGGCTGTAGAAGATGTTTTATTGAATGATGTCAAATTTAAAGAAGAAGCAGAACCCCAAATAGATACTGAAGATGAAAACCCGGTGGTGGTGAAGTACGTTCCAATTGAAGATGAGTACCAGCACGTGGAGTATCTGGAAGTTGAAGAGGCACAGgaagatAAACTACAGATGAGAAAACTGACCGAATTTGACAATACAAGTTCAGGCCCTTCAACTCCGGGGGCCTCAAACGCGAGCGCACAAAGGAAATGGccaaagaagaaaaagaaacacGAACTAACAAAACTATACAAACAGTACACCCAAAATGATTTAAAGGAGGCTATAAAAGCGGTTACAAACGGTGTTATGACATGTACCAGTGCGGCAACAAAGTATGGCATCCCCAAGAAAACTTTGACTGTCAAAGTTAATACATATGTAGACCGTGAACGTGTCGGCCAAACTGAAGATTCCAATGAtaaacattacaaattaatagaAGAAATTAAACTCCTCCTCACTCACACCACAGCGGTGccttttaaaactaaaacgaCTAGATATTACTGTTTCTACTGTTCTACAGACGGGCGAAATTTTGAAGATACTGACGAACTGAGAGAGCATACGAGGGCTAAACACTCACATGAGTGGACAAAAATAGAAATGTACATGAGACCTCAATGGTTGAACGAAGTTATTAAATTGGACGTAGAGGATTTACATTGCAAAATTTGCCTAACAATGTTGCCAGATTGGAACAATCTGTTTGTCCATTTGGGTGTAAATCATGACCTCGAGTTTGATATGGCTTATACTAGAATAATACCATATGCTTTGAGCTCTGATCTCAAATGTTTTCTTTGCAAGCAAAATTTTCACAATTTTGGTCATCTCGACAGCCATATGAACAATCATTACAGCAATTATATATGTTATGAGTGTGGAGATACTTTTTTGTCAGCGAGCCGTTTAGATAAACATTTGAATGTTCATAAAATAGGCAATTACCCATGTGATTACTGTGAAAAAGTGTTTAAATTAGAGAAATATAAAGCGAAGCATGTTAGTTTAGTGCATATACAAGAAAGTACAGTGAAATGTTTGTATTGCTCTGAAAAATTTGTAGGCATTTTCCAAAGGCATATCCATGTGACGGAACACCATAAAGagaaagttaaatatatgaCATGCGAATACTGTGGGAATAGTTATACATGGAAGCCGTATTTTTTAGCGCATATGAGGAGAAAACATGGTGCTGAGAAAAAGTATAAGTGTAAACATTGTGAAAAAtgctttttaatgaaatatgaatTGAAAAATCATATGGTGAGACATACAGGGGAGAAGAATTTCATTTGTGGTCTATGTGGGCTAGGTTTTACAAGGATGGTTGGTTTGAAAAGACATTGTCAGAATGATCATCAAGAAGATTTGACGGaatcATATGCTGTAAAGATGGAGGATGATTCTGATACTGACATCGAAACAGAGTATCTGAACATAGAGTTTTTAGAGGATGATGATATTGGAAAAGAAAAATCAGGTATAGAAATAAATCCCACTAAAGAAATCGATAATGAATTATACCTAAACCCAGCATCCAAATACTTTAGAGAAGATGATTTAGAAAAATGCGTCAAAGAGGTTCAAAATAAAACACTGTCACAAAATAAACCATCCAAATTGCTTAAAATATCAAGGAGGGTTATTCGTATCCCTCTTGAGAaaacgtCGCCTTTAGATGAGAGTATGAAATTTACGGAAAAAGAAAGTATCCAAAGGGATGAGAAAATTAAAGACAGTGATGATAATAAAATGGATTCACCGGAAAGAGATGAATCATTCAATGTTCCAAGGAAAAAAACAAAGAGATATGCGGAGGCGGACGTGCAGAAGTGCGTGGAGGCGGTACAGAGCAAGACCCTATCACAGAGCAAGGCGGCCATCTTGTACAATGTGCCGCGCAAGGCGATACAAAATGCGTTAAAGAAAATGCCGCCTTTGGATGAAAGTATAAGTATTAAGGAAAAAGAAGGTAAACAAAAGGAAGAAGAAACTACAGACAGTGATGATAATACAACGGATTCACCGGAAATAGATGAACCATTCAGTGTTCTAAgtagaaaaacaaagaaatatacgGAAGCAGACGTACAGAAGTGCGTGGAGGCGGTACAGAGCAAGCGCCTGTCACAGTGCAAGGCGTCCATCTTGTACAATGTGCCGCGGAAGGCGATACATAATGCGTTAGTGAGACTTAAATTGGCCTCATCAAGCAACCCAATGGAGTTGATAACTGCCCAAAAGTCCAAAAAATACACGGAAGAGGATTTCAAGAAGTGTTTGGAGGCGGTCAAGAATAAGACCATGTCTCGTGGCCAGGCTTGCACCATTTATAACGTACCGAGGAGTTCCCTCCATGCCGCCATAGAAAaatattttGATGATGCTGAAAGAAAAACAGATGTGCAAAAGGCACAAGATAATGTGgattgtgtaataaaatatacgaatGCAACGCCTTTGAGAGGTTTTCATCGAGCTGGATACGCGTGTGCGTTTTGCCCCTTAAGATGTGAAAAGCCGGCGGATTTGAAGAAACACACTTTAAAAACACATAGCAAACTGCGTGCTAAAGTTAGCACGCATAGAATAGTTAAACTTGACGTGACAGgtttaaagtgtaaaatatgTGACGAAAAAATCGAAACACTCGAAAGTGTTTTGGAACACTTGAGCTCGGTTCACGGGAAGAAAATTTTCACCGGCATCCGTGAGTTTTTTATACCGTTCAAATTTGAAAGTGACGCGCTGGAGTGTGCGGTTTGTTCGGAAACGTTTCACAGTTTCAAGCTCTTAAACGACCACATGAATTGGAATCACTATAAAAATTTCGAGTGCGATGAGTGTGGACGCGGTTTTATAAGTAAACATTCTCTACGAGCGCACAGCCTAAGACATGAGACGGGAGTGTTCAAGTGTAAATTTTGTCCAAAAGTGTTTTCATCTAAAGTGCGAAGCAATGCCCACGAGCGtactgtacatatatacaacaaCTATCTATACACGTGCGGATATTGCTCGGAACGGTTTTCCAATTTATCAAAGAAAAAACAGCACGAAGTATCAAAACATAACGCAACGCCAACTCTATACAACTGCCAGGCGTGTAGCAAATCGTATCTAGATCTGCGTACGTTAAGAAATCACATACGAGCGTTTCACTTAATGCAGCGTCCACACAAGTGTGCCAAGTGTGATTTCAGTGCGTACACGCCTTATGATTTGAAAAAGCATATGATAAAACACACTGGAGATAGAAATTTTACATGTGACATTTGTTCGAAGTCGTACGGCATGAGGACGACACTTCGAGAGCATATGCGGATACATGCGAACGATAGACGGTTCAAGTGTGAACACTGTGGGCAGGCGTTCGTGCAGAAGTGTAGTTGGAAAATGCATATGCGGACTAAGCATGGCGAGCatgtgtag
- Protein Sequence
- MNYENHITFSEYLCRCKCCLNDNDLKSLWEVYECDDGTEEIYGQMVVDCFALPWYPTDEPEHICEFCVLKLREALIFKKNILAVEDVLLNDVKFKEEAEPQIDTEDENPVVVKYVPIEDEYQHVEYLEVEEAQEDKLQMRKLTEFDNTSSGPSTPGASNASAQRKWPKKKKKHELTKLYKQYTQNDLKEAIKAVTNGVMTCTSAATKYGIPKKTLTVKVNTYVDRERVGQTEDSNDKHYKLIEEIKLLLTHTTAVPFKTKTTRYYCFYCSTDGRNFEDTDELREHTRAKHSHEWTKIEMYMRPQWLNEVIKLDVEDLHCKICLTMLPDWNNLFVHLGVNHDLEFDMAYTRIIPYALSSDLKCFLCKQNFHNFGHLDSHMNNHYSNYICYECGDTFLSASRLDKHLNVHKIGNYPCDYCEKVFKLEKYKAKHVSLVHIQESTVKCLYCSEKFVGIFQRHIHVTEHHKEKVKYMTCEYCGNSYTWKPYFLAHMRRKHGAEKKYKCKHCEKCFLMKYELKNHMVRHTGEKNFICGLCGLGFTRMVGLKRHCQNDHQEDLTESYAVKMEDDSDTDIETEYLNIEFLEDDDIGKEKSGIEINPTKEIDNELYLNPASKYFREDDLEKCVKEVQNKTLSQNKPSKLLKISRRVIRIPLEKTSPLDESMKFTEKESIQRDEKIKDSDDNKMDSPERDESFNVPRKKTKRYAEADVQKCVEAVQSKTLSQSKAAILYNVPRKAIQNALKKMPPLDESISIKEKEGKQKEEETTDSDDNTTDSPEIDEPFSVLSRKTKKYTEADVQKCVEAVQSKRLSQCKASILYNVPRKAIHNALVRLKLASSSNPMELITAQKSKKYTEEDFKKCLEAVKNKTMSRGQACTIYNVPRSSLHAAIEKYFDDAERKTDVQKAQDNVDCVIKYTNATPLRGFHRAGYACAFCPLRCEKPADLKKHTLKTHSKLRAKVSTHRIVKLDVTGLKCKICDEKIETLESVLEHLSSVHGKKIFTGIREFFIPFKFESDALECAVCSETFHSFKLLNDHMNWNHYKNFECDECGRGFISKHSLRAHSLRHETGVFKCKFCPKVFSSKVRSNAHERTVHIYNNYLYTCGYCSERFSNLSKKKQHEVSKHNATPTLYNCQACSKSYLDLRTLRNHIRAFHLMQRPHKCAKCDFSAYTPYDLKKHMIKHTGDRNFTCDICSKSYGMRTTLREHMRIHANDRRFKCEHCGQAFVQKCSWKMHMRTKHGEHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00248365;
- 90% Identity
- iTF_00248365;
- 80% Identity
- iTF_00248365;