Basic Information

Insect: Bradysia odoriphaga
Gene Symbol: -
Assembly: GCA_016920775.1
Location: JAFDOW010000598.1:8037333-8051324[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4 2e+02 2.6 0.3 2 23 5 26 4 26 0.93

2 14 0.0018 0.089 13.1 0.1 1 21 921 941 921 944 0.88

3 14 0.032 1.6 9.2 0.7 1 23 1037 1059 1037 1059 0.98

4 14 0.00028 0.014 15.6 2.2 2 23 1062 1083 1062 1083 0.97

5 14 2.9e-05 0.0015 18.7 0.9 3 23 1091 1111 1089 1111 0.98

6 14 1.1e-05 0.00056 20.1 4.8 2 23 1118 1139 1117 1140 0.95

7 14 4.7 2.4e+02 2.4 0.3 6 23 1154 1171 1152 1171 0.96

8 14 0.015 0.76 10.2 5.6 3 23 1178 1199 1176 1199 0.95

9 14 0.015 0.78 10.2 0.3 2 23 1212 1232 1211 1232 0.94

10 14 8.6e-06 0.00043 20.4 1.2 1 20 1238 1257 1238 1260 0.94

11 14 7e-06 0.00035 20.7 1.0 1 23 1268 1290 1268 1290 0.99

12 14 0.00016 0.0082 16.4 4.1 1 23 1296 1318 1296 1318 0.98

13 14 2.8e-06 0.00014 22.0 2.8 1 23 1324 1346 1324 1346 0.99

14 14 0.19 9.7 6.7 4.3 1 23 1352 1374 1352 1375 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4	2e+02	2.6	0.3	2	23	5	26	4	26	0.93
2	14	0.0018	0.089	13.1	0.1	1	21	921	941	921	944	0.88
3	14	0.032	1.6	9.2	0.7	1	23	1037	1059	1037	1059	0.98
4	14	0.00028	0.014	15.6	2.2	2	23	1062	1083	1062	1083	0.97
5	14	2.9e-05	0.0015	18.7	0.9	3	23	1091	1111	1089	1111	0.98
6	14	1.1e-05	0.00056	20.1	4.8	2	23	1118	1139	1117	1140	0.95
7	14	4.7	2.4e+02	2.4	0.3	6	23	1154	1171	1152	1171	0.96
8	14	0.015	0.76	10.2	5.6	3	23	1178	1199	1176	1199	0.95
9	14	0.015	0.78	10.2	0.3	2	23	1212	1232	1211	1232	0.94
10	14	8.6e-06	0.00043	20.4	1.2	1	20	1238	1257	1238	1260	0.94
11	14	7e-06	0.00035	20.7	1.0	1	23	1268	1290	1268	1290	0.99
12	14	0.00016	0.0082	16.4	4.1	1	23	1296	1318	1296	1318	0.98
13	14	2.8e-06	0.00014	22.0	2.8	1	23	1324	1346	1324	1346	0.99
14	14	0.19	9.7	6.7	4.3	1	23	1352	1374	1352	1375	0.93

Sequence Information

Coding Sequence: ATGGACCAATTACAGTGCCCAGTGTGCACACTATTCCTACATGTGGGCATGGACCTGCAATCCCATCTGGACACCCATCCGAAAGATCAAGTGATCAAAGCATTGGTAAACATAACAATGACAAAACAAGTCAGCGATCCAAATTCGACATCAGACCCACAGCACAGCAAATATGCACCGATTGCAGAAAATGCTTTTACTCAGGAAGTGAATCAATTTTTACCGGAACCGATTCCCCGTCGACCACAACAAGTTTTATTCGGTTACAGTTGCAGTACTCGCGTATTCCGAGAGGTTCCCACCCAACAATCCACTACGACACAAAAATTTGTCACAAATGCATTACCAGCCAGTCATATTGTTCCGGCCATCGCAACGCAGGCATCGTTTGCAAATCAACAAAGTCAAAAATTCCCACCACCTCCATATGGATCAATTGTAACGAAACGTGCCATCGAATCACCAGTTCAAGCACTTTCATCGACCAATGCATACAAATTGACGTCGCATCAAGTCGGTATAAGTAGTCAACGAAATGGTACTCTCTATCTTCCAGTGGAAAATGTTGATGAAGTGGAAGCGGTTGGTGAAGAGCACATCGACGATTACACACAGCAGGCTGATCAAAATATCGAGTACATTGAACACGCTGACGAGTATTTGGAAGACGATGGCGAGAATCAAGATGACTGCGCCACATATGAGAATGAGAACGTGGATCCGTTACAAGACAATCGAATAATTCGACCGAATTCAGTCATTTACATCAATGACGATGAGCCCATCGATGTGAAGCCCGATGCACACAATCAGAAAAAATTCACTGAAGGCCTAAGGGTACTAAGTGACGTAAAGTTGCCAGCTCCAGTGGACATAACAAATTTGGATTGTAAATTCGGCGAATCGTTCAAATTGGACGATGTGTTGTGTACACGGTTACAAACGGATAGTGGTCCCATCGAAGTGGATGAAAATACGGACGATGAAAGTGAACCGGTTGTGGTTGGTGATAGTAACAGTGAATTTGAAATGTTGGGCAGTGTTGTGGATGTTAAGCCGAAATTTGACACGGCAGTGAAATGTGAAATTGATGTTGCAAAGACTATAAAAAGTGAGCTCGAAGGAGACAAACAATCGTACCAGAATGCCGATGAGGTGATCCACGAGAAAGAAATCTTAAATGCCAATCGCAGTATTATTGTCCTACCAAAATCTCCATTGCCTACAACCAGTTACAGAACGTTAGCGAAGCCTTTTAATTCGTCCGAAACGTCATCACCTTCACCTCGTCCCGAACAAAACTCTAGCTTAAGCTCAAACGATGCATCAAAAGCGGAATGTACAGCTGGCAAACAATCATCAAGCAAAGGCCTTACTCCACCTCAATCGCCAGAGCCAAATCCATGCGAGATCAGAATATCAAATGTGACGTCGATTAGCAACACCAGTGTCATTCGATTAGCATCGCCAAAAAAACCGTCAATACCCGAAACGAACCCGAGACCACTGCTGAAAACGCCGTTCTCCAAACAGCCAAAAAAGATAGTGGTGAAATTCAAGAAACCATTCGTTCCAGTCGTCGAGGAAGACGCCAATCTTCAACCACCCGAAATAATTGTTCCGTCGTCACATGATGCGGTTTCGAAAACCGCTGAACATGACAGTTCGGAACAGTCGACTTCGAAAGTCGATGAACCCGCTGACCAAACCAATCATCCATTCAGTCCTTTGCGACAAACATTTACACCACCTCCACCGATTTATTCATTGATAATAAGGAATAGAGACGGCGACACGAATGTCGAGGAGATAGCTACATCTATTGTGGATTTGTGTACAAAAGAATCAACATCAAATGTCGATGAAATCGCAGAATCAAATGATTCGGTTGAAGCAGCGACCACTGAGAAGGTAGCGAACGAGGACGACATGGACATTGATGTCACTGTAATTAACTCACACAAAGGTGATAGCGAAATCTTTACAATTGAATTCAAAGACGACGAGAACGACATCAACGAATCCAAAGTTGACCTCGATGTCGTGCAAGTAAAAATTGACCACGATGCTATTCAAGTGAATCCAAAACCGATTTATCGAGACGATGAATCAATTCTACCCGACTGTAAGGGCATTGTTGTTCTACCCGAATCGTCCAGTACTGACTTGTCATCGTCATCCTCGCATCCGACCACATCATCGCAAACGCAAAACAACTTCAACGAGGCCGGCCCCAGTCGTATCGATTACGGTCTGTCTTCATTTGAGGACTTTTATTCTAGCGTACGACTATCACCGATTAACTTTACACCGGAAAACTATGCCTGGAATCAGCAATATGTTCCGTttgacaatgagaaaaattcgTACATGGACTTGGACGTGTACAAAAATACCAATTCTTATGAGGAACGGGCGCCATCCACGGACAGTTTGAACATTCGAACGGATGAAAAAATGCCGGCCAAAGGGGAAATATCCGAGCAGGAAAGCAATGGCGACGTTGAGGGGTCGTCGTGGAGCCATCAGATGTATCCGTTACAAGACACGTTTCCACGATATCCGAGTTCTTATGATACAACGGTTGCCAGAGAGAGTTGGAGTTTGAGTAACGATCAAAATTTGCCGAACAATTTGGATAGTCCGGTGGTTTTGCCGAAATTCACATCATTGGAATCGGCGTACACCGATGTGAAAGGCACCTCTACCGAAAATGGTTTAACGATTGATAAGTCAAAGCAATTTCGTACGCGAAAAAAATACCGCTGCCCCGAATGTCCGAAAGTGTTCACAATGCTCAAGGACAAACGAATTCATTTAGTAGCCGATCATGATTATCAAATTCCATGCCGAACGAAGAGCAAAATAACATGCACGTCGACTAGCGTAACGGCTAGCACCAGCATTAGTACAATAACGAGCGGCAGTAATTCGTTGACGGAAATTGACTTTAAGATCAAACAAGAGAATCCACTCAATCGCGATATGCCGGAAAGCATGAACCGTTACTTGTTGAAATACAATTACAACATCTTGCGGGATCGATTGTCCAATGATATAAAAACAGAGCCGGTCGTTGAGGATGCTCCGACAGTCGATGCCAATTGTTATCAGTGTATGGTTTGCAAGGAGCAATTTTTCACTATCAAATCCTACGATGCCCATATGTCCATTCATCCTGCTGAATGTTATACGTGTGGCAAGTTCTTCAATCACTGGTTGAATTTGAGCATACATCTGAAGCGGCATTTGAATATACGAGATTATTGGTGTACGTACTGCAACAAGAAATTTGTGGTGCGACAAAATCTGCTCGATCACATGAATACACATTCTGGAGAAGCTCCCTTACAGTGCAAAATTTGCTCGAAACGGTTCCGTCGATATTCGAATTTAATTCAGCATCGCAACCGTCACCACCTAAAAATTCGACCGAAAGAAAAGGATTTCATTTGTTCGTGCGGTGAAGTATTCCATTCTGAAGCAAAAATAGCCTGGCACCGTGAGACGCACGATAAAAAGCCAAAATGTTGTCCGTATTGTCGGGAGCGATTCATGCACAAAAACAGTTTGTCGCGTCACGTACGACTCTCCCATCCCGACAAGTTCGGTATATTCAAAGAGAATGCCGTCGAATGTATGATTTGCAATAAGAAATATCTGAAATCGAGCCTGAAGGCGCACATGGTACTGCATACAAAGAAACGGGAATTCGAGTGTAGCATATGCAATAAGAGCTTCACATCGAAATGGAATTTAAAGCAACACAAATGGATCCATGCGAGCCGCTCGTCAAAGCCATTTAAATGTAACTTATGTACAAAAGCATTTATCCGGGAATCGGAGTACGTGTCACACATGAATACGCATAAGGCGATCAAACCGTATACGTGCGATCATTGCGGATGCCAGTTCGCTAGAAAGTACAATTGGTTGCGGCATGCACGTGAACACGAAACTCCGAAACGGTATCGTTGCGACGATTGTGGTAAAGTATTCCATCGCGCCTATTACCTCACCGAACATAAGCGGTCACATACGGGAGAAAGACCGTTCGAATGCATCATCTGTGGTAAAACGTCTACAACAAAAACGAATCACAACAAACATGTCAAAATTCATCACGCCCGGGATCCACTAACTGCTGAAGGATAG
Protein Sequence: MDQLQCPVCTLFLHVGMDLQSHLDTHPKDQVIKALVNITMTKQVSDPNSTSDPQHSKYAPIAENAFTQEVNQFLPEPIPRRPQQVLFGYSCSTRVFREVPTQQSTTTQKFVTNALPASHIVPAIATQASFANQQSQKFPPPPYGSIVTKRAIESPVQALSSTNAYKLTSHQVGISSQRNGTLYLPVENVDEVEAVGEEHIDDYTQQADQNIEYIEHADEYLEDDGENQDDCATYENENVDPLQDNRIIRPNSVIYINDDEPIDVKPDAHNQKKFTEGLRVLSDVKLPAPVDITNLDCKFGESFKLDDVLCTRLQTDSGPIEVDENTDDESEPVVVGDSNSEFEMLGSVVDVKPKFDTAVKCEIDVAKTIKSELEGDKQSYQNADEVIHEKEILNANRSIIVLPKSPLPTTSYRTLAKPFNSSETSSPSPRPEQNSSLSSNDASKAECTAGKQSSSKGLTPPQSPEPNPCEIRISNVTSISNTSVIRLASPKKPSIPETNPRPLLKTPFSKQPKKIVVKFKKPFVPVVEEDANLQPPEIIVPSSHDAVSKTAEHDSSEQSTSKVDEPADQTNHPFSPLRQTFTPPPPIYSLIIRNRDGDTNVEEIATSIVDLCTKESTSNVDEIAESNDSVEAATTEKVANEDDMDIDVTVINSHKGDSEIFTIEFKDDENDINESKVDLDVVQVKIDHDAIQVNPKPIYRDDESILPDCKGIVVLPESSSTDLSSSSSHPTTSSQTQNNFNEAGPSRIDYGLSSFEDFYSSVRLSPINFTPENYAWNQQYVPFDNEKNSYMDLDVYKNTNSYEERAPSTDSLNIRTDEKMPAKGEISEQESNGDVEGSSWSHQMYPLQDTFPRYPSSYDTTVARESWSLSNDQNLPNNLDSPVVLPKFTSLESAYTDVKGTSTENGLTIDKSKQFRTRKKYRCPECPKVFTMLKDKRIHLVADHDYQIPCRTKSKITCTSTSVTASTSISTITSGSNSLTEIDFKIKQENPLNRDMPESMNRYLLKYNYNILRDRLSNDIKTEPVVEDAPTVDANCYQCMVCKEQFFTIKSYDAHMSIHPAECYTCGKFFNHWLNLSIHLKRHLNIRDYWCTYCNKKFVVRQNLLDHMNTHSGEAPLQCKICSKRFRRYSNLIQHRNRHHLKIRPKEKDFICSCGEVFHSEAKIAWHRETHDKKPKCCPYCRERFMHKNSLSRHVRLSHPDKFGIFKENAVECMICNKKYLKSSLKAHMVLHTKKREFECSICNKSFTSKWNLKQHKWIHASRSSKPFKCNLCTKAFIRESEYVSHMNTHKAIKPYTCDHCGCQFARKYNWLRHAREHETPKRYRCDDCGKVFHRAYYLTEHKRSHTGERPFECIICGKTSTTKTNHNKHVKIHHARDPLTAEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00245700;
90% Identity: iTF_00245700;
80% Identity: -