Basic Information

Insect: Bradysia odoriphaga
Gene Symbol: hang
Assembly: GCA_016920775.1
Location: JAFDOW010001337.1:3315501-3325585[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0013 0.067 13.5 1.0 2 23 257 279 257 279 0.95

2 23 1.1 56 4.3 2.9 2 22 362 382 361 382 0.93

3 23 0.91 46 4.6 0.7 3 21 392 410 391 411 0.94

4 23 0.13 6.7 7.2 0.6 3 23 452 473 450 473 0.89

5 23 0.31 16 6.1 0.0 2 23 513 535 512 535 0.87

6 23 0.00038 0.019 15.2 0.9 3 23 585 606 583 606 0.95

7 23 0.0071 0.36 11.2 0.1 1 23 614 637 614 637 0.96

8 23 0.16 7.9 7.0 0.1 1 23 649 672 649 672 0.95

9 23 0.0012 0.062 13.6 0.5 1 23 675 697 675 697 0.97

10 23 0.026 1.3 9.5 2.5 1 23 703 726 703 726 0.96

11 23 7.8e-05 0.0039 17.4 0.1 2 23 828 849 827 849 0.97

12 23 0.072 3.6 8.1 1.9 2 23 878 900 877 900 0.96

13 23 0.0014 0.073 13.4 0.3 2 23 909 931 908 931 0.95

14 23 0.0009 0.046 14.1 2.4 1 23 971 994 971 994 0.96

15 23 0.00014 0.0072 16.6 0.8 2 23 1032 1053 1031 1053 0.97

16 23 0.015 0.76 10.2 2.2 2 23 1062 1084 1062 1084 0.96

17 23 0.00046 0.023 15.0 1.2 2 23 1092 1113 1091 1113 0.97

18 23 0.0013 0.063 13.6 4.0 2 23 1152 1173 1151 1173 0.96

19 23 0.019 0.97 9.9 0.0 1 23 1208 1230 1208 1230 0.92

20 23 0.0014 0.071 13.5 0.2 2 23 1265 1287 1265 1287 0.91

21 23 0.24 12 6.4 0.1 2 23 1312 1333 1311 1333 0.95

22 23 7e-06 0.00035 20.7 0.2 3 23 1347 1367 1347 1367 0.99

23 23 0.00013 0.0064 16.7 1.1 1 23 1477 1499 1477 1499 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0013	0.067	13.5	1.0	2	23	257	279	257	279	0.95
2	23	1.1	56	4.3	2.9	2	22	362	382	361	382	0.93
3	23	0.91	46	4.6	0.7	3	21	392	410	391	411	0.94
4	23	0.13	6.7	7.2	0.6	3	23	452	473	450	473	0.89
5	23	0.31	16	6.1	0.0	2	23	513	535	512	535	0.87
6	23	0.00038	0.019	15.2	0.9	3	23	585	606	583	606	0.95
7	23	0.0071	0.36	11.2	0.1	1	23	614	637	614	637	0.96
8	23	0.16	7.9	7.0	0.1	1	23	649	672	649	672	0.95
9	23	0.0012	0.062	13.6	0.5	1	23	675	697	675	697	0.97
10	23	0.026	1.3	9.5	2.5	1	23	703	726	703	726	0.96
11	23	7.8e-05	0.0039	17.4	0.1	2	23	828	849	827	849	0.97
12	23	0.072	3.6	8.1	1.9	2	23	878	900	877	900	0.96
13	23	0.0014	0.073	13.4	0.3	2	23	909	931	908	931	0.95
14	23	0.0009	0.046	14.1	2.4	1	23	971	994	971	994	0.96
15	23	0.00014	0.0072	16.6	0.8	2	23	1032	1053	1031	1053	0.97
16	23	0.015	0.76	10.2	2.2	2	23	1062	1084	1062	1084	0.96
17	23	0.00046	0.023	15.0	1.2	2	23	1092	1113	1091	1113	0.97
18	23	0.0013	0.063	13.6	4.0	2	23	1152	1173	1151	1173	0.96
19	23	0.019	0.97	9.9	0.0	1	23	1208	1230	1208	1230	0.92
20	23	0.0014	0.071	13.5	0.2	2	23	1265	1287	1265	1287	0.91
21	23	0.24	12	6.4	0.1	2	23	1312	1333	1311	1333	0.95
22	23	7e-06	0.00035	20.7	0.2	3	23	1347	1367	1347	1367	0.99
23	23	0.00013	0.0064	16.7	1.1	1	23	1477	1499	1477	1499	0.98

Sequence Information

Coding Sequence: atgactgaaaatctCATTCGACGAGGTGGATGTCGACTGTGTTTAGCACCAGACTCTGAATGTGTACCAATTTTTGCGACCGCTGCAGCCGACAAAGAGCCCCTTTCATCCAAAATTCAGGCTTGTGTCAATATCAAAATCCATCAAGGTGACCGTTTATCAGCGCGCGTATGTCACGCCTGTATCAGCTACTTAAATTCATGGCAAAGTTTCAAAAATCGTTGCTATGCAGCCCAAAAGAAGCAACGCGGCATGTTGGATTTATTTTTAGCGAAAGAACGAGCTAGACTTAAAAATGCCTCCCAACAACAAAACCCACCGCAGACACCGTCTGTGGTGGCCGCAAATGCACAACGACAAATGGAACAGTATCGGCAACAGCTGGAACAGCAAAGAATATTAAAAGATGCACTCAGTCAGCCGAGCGGCAGCAGTGCTTACAAAAATGCCCAAAGTAACGCTTCAGTGGATGTGAGTTTTATAAAATCAGAACCGGCCGACGATATACCAAATGAAGCGGAAGTGGAAGACGACGAAGAAATGGATCCATCGCAATTTTTGGCTAGAGAAAATGATGAAGAAGAGCCAGCCAATGAAGAAGAAGGCGGTGGACCACCGATTCTAACGTCATTGGGCCTAACCCATATCAATCATGTGAATCCTTATAGCTTTCTGAGTACCGAACTGGGCAACGAATACCAATCGGAGACCGACAATTCAGTCAACATGTTCTCACCAACGTTCCGTCGAACTCCCGGCTCGCAGCCATCCTGTACCGTGTGTAACATGAAATTCTCTAATCGTGCGAACGCACGTCGCCACGAACGGAACATACATGGCATCAAATCGGAACCACTGATGGGTCACACTTCCACACCGCAATCGGTCACAATGCCAATGCATCATCCAGTAATGCGACCCATAATACGACCAATAATGCGACCAAtgcagaaaaagaagaaaatcatcCCACCAATTGTGTACGACTACACCAAACCGGAACTGTACCGTGAACTGTTGACGGAatcgaaattgtattttatcAAGCGGCACATTGACTTCTTGGAACAATATCAGAACATGCGGTGCACGTGCTGCGATCGCGAATTTCAAACCTACAAAATGTTTATGGTGCATATGCGTAAGCGTTACGACACCCTGTCCAGAAATCTATGCTTTAAATGTCTTAAGCAATTCCAGTCGAAAGCCTTATTTGTGGCTcatttgaagaagaagaattgcCTGAATTTGTACAAGGTGTACCTTGCCGATGATACCGTTTCCAAAGAACCATTGCCGCCAATACAGGCACGTGTTGGCACCAAAGAAATTATAGCAAATAAAGTGTACGGCTGCAAGTTATGTTCGAAAACGTTCCGATTGAAAATGGATTTCCGTGGTCACGTCTACGAAGCGCACGGTGATGTACAAAAGAAAGAAACGATGGGACCCGAGTGCGGCTTCTGTAAAAATGTTTATGACGATCCGAGCGTTCGGAGGCGACATTACAACAACATGGAGTGTATAGTGTTTCTAATTTGCGGTACTTGTGACGAGAAATTCGATAACTTAGCCACATACATAGAGCATGTATATGCCGAACATCTTAAACCAAATCCTGACGGTTCAGTGCCGCCAATACCGCCCGATTCGATGACCAGTCCAGAAGCATCATTGAGTTTAAACAGTTCGAACGATCAAGATCCCACATCACCGTCCGTACAATATGCTAGTCTGAAGTATCCACAAAATTGCAAGGTATGCGGCAAGCAGTACAATAACTATTACAACGTGCTAAGGCACATGGAATCGAAGCATCCGTATCAATTGCCAGACACATATCGGTGCGAGCCCTGCGATATTGGCTATCCCCGTCAAACTGAGCTTCGCGAGCATATGTATAAAATTCACGGTGTCACGATGCCAAAGATTAAAAGAGAAACGTACACCTGCCGTATGTGCTTGATGACATTTGACAACAAAGATGTATGGATCGAACATCAAGCCGTCAATCATTCGACGTTCTATTGTACGCATTGTGACATGGAAACGGAAAGTAAAGAGGAGCTTGAAGCGCATCTGGACATGCACACCAAACAGAAAATGTTCACCTGCACAGTCTGCTATCACTCTTTCCACACGGAAAGAGGTCTTGAGACGCACTTGGCGGTCATGCATCAAATGAAAAAGGAAGATATGCCGGAAGCAAATGGCAGCTACGTGGAGGAAGGAATGGATATCGACGGAGAATTTAATAtgaacgatgatgatgatgatgacgacgacgacgaagGAGCATTAGAAATTTCTGCCGATGTACACGTGAATGGTGAGACTGgtggtgattttgagaatggAACTTTCGAAGAAGACGAGGATGATGAAGGAAACACTGCTGACAATGGCGACACCACCGAAAATGCGTCGAAAAGGTTGAAATTGAAAGAAGAAGTCGTGGAAGAAGAGACCGTAGGATTAATTTCATGCCCATTGTGCCCCGAAAGGTTTGTCGGAAAAATTGAGCTGTCAAATCATATGCGTACCCATGGAGCTGCGGTACCAGCTTCGTTCTATAATAATCCGATGAAAGTGAACCCCATTAAACGTACCGGCCATGTAAGCAATCGCATGAGATGCCGTATCTGCCAGAAAAGAATTCACACCAAAATCGGCTACAAACGACACATGTTGGTGGTGCATCAAGTTCGCGACTGTGTGTTCATCAAATGTAAAATCTGTCCAGCCGAATTTAGCAACGACAAAGGTCTGAAAGTGCACATGTTCCGCACGCATAAGGTAACCGTGCAGCAAATGCAAAATGATCCGTCGCTACGATCGACGCCAAATAAAGAAACGACTGCTGGTTCCATTTTACCAAAGATTTTGCCGAAAATTGCGCCAAAGTTAATGTTCGAATGCGACATTTGTCACACTGTTTACCGTAACCATGAACAACTTTCATCGCATCGAAGTGTTGTGCATGGAGCTGCTACTCCACCAGCAGCTGCTCCTAGTGCTGCTAACAACACAAATGAAAACCTGGACACCGAAGATATTCAAGAACCGATGTTGCCTGTACCGGAAGCGTGGTGGCAATGTCGATACTGTGACGAAACATTTAATGCAAGTAAGAAGCTCACCATCCACATGAACAGCCACGAAGAGCACGACAATACGGACAATACCTGCAAAGACTGTGGCAACGTCTACGGAACACGAAAATCCCTCTGGGTACACCGGCACAAGAAACATCCACGAATACCCAACCCATCCACATGTGAGCTTTGCTCGAAAGTATTCTTTGATAAAACCGAACTATATTACCACTTAAAGACCCACTCCAACGACGATGTTTATTCCGGTCTGCAAGAAATGCATCAAGATCTGGAAAATGATCCGGCCGTAAAACTGGAAAAGGTTCCGCCATCAACGAATTATGGAGAAGAAGATTTGAATTGCCATATATGCGGACAAACGTTCCACGATAAGCGAGTTCTAAGCAAGCATTTGCGGTTGCACGAATCGGACAACAATCCGCTGCATTCAATGCTCGACGTGGACGAAGAAAACGGATCCGATTACAGTTATCCCTCGTACCAGGGACAAATGGTCGATGGCCAATTTGCGTGCGACATGTGCCCAAAAACGTTCCCGCTAATCAATGCGTTAAAAGTGCATCGTGGTTGGCATTTCCGTAGTCCTGATGGTCGACAAGTGACAGATCCCAGTAACATTTGGCAGCCCGATGTACCTCAAAGTAAATTTAAACGAACCAAAGCAGCTAATCCACCAACGTGTCCGTACTGTAATTCAACATTTGCCAGTGGAAACAATTTACGCCGTCACATAGTTGAGGTGCACAAACGTAACGAGGCTAAAATGATGCGTGAAAATGGAACCGTCAGCGAAACTGTGTTCGTCGAAAAAGAATTGGAATGCCAGTCATGTTCAATAACGTTCAGCAGTCGACCGGAATGGGTAGACCATAAGATCAGTCATGCTAGGACGATGAAACCATCCACAACATTCGAATGGGGGTGTGAAATTTGCGGTAAAGTGTTTACACGAAAAGAACGTCTCTTGGCACACATGGTCACTCATCTGAGTGGCAAGGAGGGAGATGGAAGCGTCCATTCAGCTGATCAAAGTGAAATTGGCGGCGAAAATTCACGTAGTTCCATGTCATCGCAATCTCATTCCCAGCAATCACAAGAATCGTCCTCGCTTCATCAACGAATGCAACAGGTACAACAACAACAGTTGCTAAAACAACAACATCCGTTGGCTACACATTCGCAAAATATCAAGCCTGAAGAAGTGAGTGAAGACGACGAAGAGGAACAAGAGCAAGAGGACGAAATTGacgaagaagaggaagaagaagtgGATGAAGAACAAACGCCAGAAGCACCTGCCGAAGCTGCGGCATATTCGTGCGATTTGTGTCAAGTATTTTTCCGCACAGCCAAAGAACTACGGCGTCACGTCACAACTCACATCATAAATGGACCGGAAACATCACAGTCAGCCGATTCCGATCGTAATCAACAAAACACTACCCAACTGGACGGCTTCAAATGTCGTCTGTGTGGATCGAGTAGCGAATCCCATATGGGAATGATTACGTGCATGGAATCGCACAAAACACCGACGAGCCTTCGTTGTGCCCAATGTCAATTATATTTCAATAACGAACAGCAAGTGTTAGACCACGAAACACTGTGCCATCCGCAGAGCTTTGAATAA
Protein Sequence: MTENLIRRGGCRLCLAPDSECVPIFATAAADKEPLSSKIQACVNIKIHQGDRLSARVCHACISYLNSWQSFKNRCYAAQKKQRGMLDLFLAKERARLKNASQQQNPPQTPSVVAANAQRQMEQYRQQLEQQRILKDALSQPSGSSAYKNAQSNASVDVSFIKSEPADDIPNEAEVEDDEEMDPSQFLARENDEEEPANEEEGGGPPILTSLGLTHINHVNPYSFLSTELGNEYQSETDNSVNMFSPTFRRTPGSQPSCTVCNMKFSNRANARRHERNIHGIKSEPLMGHTSTPQSVTMPMHHPVMRPIIRPIMRPMQKKKKIIPPIVYDYTKPELYRELLTESKLYFIKRHIDFLEQYQNMRCTCCDREFQTYKMFMVHMRKRYDTLSRNLCFKCLKQFQSKALFVAHLKKKNCLNLYKVYLADDTVSKEPLPPIQARVGTKEIIANKVYGCKLCSKTFRLKMDFRGHVYEAHGDVQKKETMGPECGFCKNVYDDPSVRRRHYNNMECIVFLICGTCDEKFDNLATYIEHVYAEHLKPNPDGSVPPIPPDSMTSPEASLSLNSSNDQDPTSPSVQYASLKYPQNCKVCGKQYNNYYNVLRHMESKHPYQLPDTYRCEPCDIGYPRQTELREHMYKIHGVTMPKIKRETYTCRMCLMTFDNKDVWIEHQAVNHSTFYCTHCDMETESKEELEAHLDMHTKQKMFTCTVCYHSFHTERGLETHLAVMHQMKKEDMPEANGSYVEEGMDIDGEFNMNDDDDDDDDDEGALEISADVHVNGETGGDFENGTFEEDEDDEGNTADNGDTTENASKRLKLKEEVVEEETVGLISCPLCPERFVGKIELSNHMRTHGAAVPASFYNNPMKVNPIKRTGHVSNRMRCRICQKRIHTKIGYKRHMLVVHQVRDCVFIKCKICPAEFSNDKGLKVHMFRTHKVTVQQMQNDPSLRSTPNKETTAGSILPKILPKIAPKLMFECDICHTVYRNHEQLSSHRSVVHGAATPPAAAPSAANNTNENLDTEDIQEPMLPVPEAWWQCRYCDETFNASKKLTIHMNSHEEHDNTDNTCKDCGNVYGTRKSLWVHRHKKHPRIPNPSTCELCSKVFFDKTELYYHLKTHSNDDVYSGLQEMHQDLENDPAVKLEKVPPSTNYGEEDLNCHICGQTFHDKRVLSKHLRLHESDNNPLHSMLDVDEENGSDYSYPSYQGQMVDGQFACDMCPKTFPLINALKVHRGWHFRSPDGRQVTDPSNIWQPDVPQSKFKRTKAANPPTCPYCNSTFASGNNLRRHIVEVHKRNEAKMMRENGTVSETVFVEKELECQSCSITFSSRPEWVDHKISHARTMKPSTTFEWGCEICGKVFTRKERLLAHMVTHLSGKEGDGSVHSADQSEIGGENSRSSMSSQSHSQQSQESSSLHQRMQQVQQQQLLKQQHPLATHSQNIKPEEVSEDDEEEQEQEDEIDEEEEEEVDEEQTPEAPAEAAAYSCDLCQVFFRTAKELRRHVTTHIINGPETSQSADSDRNQQNTTQLDGFKCRLCGSSSESHMGMITCMESHKTPTSLRCAQCQLYFNNEQQVLDHETLCHPQSFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00245663;
90% Identity: iTF_00245663;
80% Identity: -