Bodo007435.1
Basic Information
- Insect
- Bradysia odoriphaga
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_016920775.1
- Location
- JAFDOW010001058.1:240833-253751[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-86 1.6e-81 273.2 15.1 3 218 188 386 186 386 0.90 2 2 0.63 1e+04 -4.0 0.1 134 140 612 618 580 645 0.56
Sequence Information
- Coding Sequence
- ATGTTCAAATCGATTTTGAATTCGATTCAAAAGAATGTTATTGGCGCCACGATATTTGGAAAATCACCCACAATGAGCACATCCGACGAAATTATACCCGCAGAGCCAATACCTTTGATCGATGTGAACGACGATCCAATTACACTTAACAGTTCAACAGAGGAAACTGAGAACACTGTAGATGCACTAGCCGATTGTGAAGATCCACTATGCGATCCATTAGCACTAGATGACAGCAGCGTCAGTACGGAGCTAGCTGATGTCGCTGATAAGACACTGACCAGTTTGAAGACGGCAAGTGACGGTCAGATAATACTCATAGACGTAAATATCTTAAGAAACGTTGAACAAAACGATGAGATTGACAGCAGAGACATTCGAACGGAGGATTTGATTGAAACGATCGAAGAGGGTGTACCTAGTGATGGTTCCGATTCTGGTGTTGCTTCGGATGGATCGATTATTGAGAGTCGACCACAAATACCCAGCATCGTCGACAAACGCAGTTGCCTGAAGCGTCGTTCCTCCGATATGATACTCGCCGACAATGCGAAACGAGTGAagcgaaatatcaaatttgaaGGCGTGAATGTCTTCTATTTCCAACGAGTGCAGGGAAATAGTTGTGTTCCGTCGCAAGGCGGATGTACGCTCGGTATGGCCCGACATCACATGTACAATCGAACCTTTTCGTCGCTCTCTGAACACGCAGCCGAACAGAGACGCATTCATCGGTTACAGGACATGAACGCGAATAATTCGTCAACGGATGAATCGGACACGGAAGATGAAGCAAGTGAAAATAGCGGCTCCGATTTGGACACCGAAACGAATGGGTTCTTGCAGCCTGTTCCCGCACGACAAAGAAGAGTTATGCTGAAAACGGCTGGGGTGctgaaaattgacacaaatgaGAAGGATGAATGCCGGAAGATTCGGACTTCGCGAGAGATGTGTGGCTGTAGTTGTAGCGGCTATTGCGATCCGGACACGTGCTTTTGCAGCCAGTCCGGTATTCAATGTCAGGTGGATCGACCAAATTTCCCATGCGGATGTTCACGCCACGGTTGCGACAATGTGGTTGGTCGTGTGGAATTCGATCCGGAACGTGTCCGGATTCATTTCATTCACACAATTTTACGCTTAGAATtagaaaataagcaaaatcgaTCGGAAGAGATCGTGTTCAAAAATGACGTGTCACGGCAATGGCATCCGCAAACCCGACCGCCCGACATCAGTGCTGCCGGCTCGATTAGTGACTTTTCCAATTGTAACTACAGCTCGGTCGCCTTCGACAACCTATCCCATCGAAGTAGCACGTCAATGGCCGCTGATCGAACGATGAAAGACTATGATCGAACCAACCAATCGATGCCATCACATTCGGATACtagtaatttaattgaattggcCAACCGGCCGTCAGACGATGATACGTTAAATTTACATTACGATTACCGCAACGAGGAATTCAGCACTGAGTCGCTGATCAATTCGAATATTGTGACGGATATCGTCGATAAAGGCGGCGACATCGGTACCGTTAATAGCTTTAATTCGACGTTTAATGAATTCTTGGAGCGAACATACAACTTAGGAGGCACAGATCATTATCAACACCATTCCGCTTTTTTATCGTCACCGCATAATGGATCCACATCGTCGGGCATCGAAAACATTCCCTACGCCCTTTGTGACGAAACGATACCAAATAGTGACACTGCAATACCATCGACATCGTCGCAACATTTCGCCACCAAATTGGATGGTGGAGCTTCGCTACTGCACAACGACATCACCGAATTTCGAAATAGTGCGGCGAATGTGACGGATTCGAATGAGAAAGAACAATTGGATGATTCGATCACGGAATTGTTGAACCATGAAATTGATGTTGAAGAGGAAATACCATCGGTAATGGTAACACTGGAATCGAGTAAAGCGTGTGGAACGGTTACGGATGACGATTTTTCGTTGTGCGTTACGGACGACGAAGAGTGTGCGGATACAGatgatttgaataatttataa
- Protein Sequence
- MFKSILNSIQKNVIGATIFGKSPTMSTSDEIIPAEPIPLIDVNDDPITLNSSTEETENTVDALADCEDPLCDPLALDDSSVSTELADVADKTLTSLKTASDGQIILIDVNILRNVEQNDEIDSRDIRTEDLIETIEEGVPSDGSDSGVASDGSIIESRPQIPSIVDKRSCLKRRSSDMILADNAKRVKRNIKFEGVNVFYFQRVQGNSCVPSQGGCTLGMARHHMYNRTFSSLSEHAAEQRRIHRLQDMNANNSSTDESDTEDEASENSGSDLDTETNGFLQPVPARQRRVMLKTAGVLKIDTNEKDECRKIRTSREMCGCSCSGYCDPDTCFCSQSGIQCQVDRPNFPCGCSRHGCDNVVGRVEFDPERVRIHFIHTILRLELENKQNRSEEIVFKNDVSRQWHPQTRPPDISAAGSISDFSNCNYSSVAFDNLSHRSSTSMAADRTMKDYDRTNQSMPSHSDTSNLIELANRPSDDDTLNLHYDYRNEEFSTESLINSNIVTDIVDKGGDIGTVNSFNSTFNEFLERTYNLGGTDHYQHHSAFLSSPHNGSTSSGIENIPYALCDETIPNSDTAIPSTSSQHFATKLDGGASLLHNDITEFRNSAANVTDSNEKEQLDDSITELLNHEIDVEEEIPSVMVTLESSKACGTVTDDDFSLCVTDDEECADTDDLNNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00245401;
- 90% Identity
- iTF_00245401;
- 80% Identity
- -