Bcop014021.1
Basic Information
- Insect
- Bradysia coprophila
- Gene Symbol
- CSRNP3
- Assembly
- GCA_014529535.1
- Location
- NW:308847-318062[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-86 9.9e-82 273.9 15.3 3 218 188 386 186 386 0.89 2 2 0.28 4.6e+03 -2.9 0.1 54 69 613 628 598 674 0.49
Sequence Information
- Coding Sequence
- atgttcaaatcgattttgaaTTCGATTCAAAAGAATGTTATTGGCGCCACGATATTTGGAAAATCACCCACAATGAGCACGTCAGACGAAACTATACCCGCAGAGCCAATACCTTTGATCGATGTGAACGACGATCCAATTACACTTAACAGTTCAACAGAGGAAACTGAGAACACTGTAGATGCACTAGCCGAATGTGACGATCCACTATGCGATCCATTGGCACTAGATGACAGCAGCGTCAGTACCGAGCTAGCTGATGTTGCTGATAAGACGCTGACCGATCTGAAGGCGGCCAGTGACGGTCAAATAATACTCATAGACGTAAATATTTTAAGGAACGTTGAACAAAACGAATTGATTGGCAGCAGAGACATTCAAACGGAGGATTTGATTGAAACGATCGAAGAGGGTGTACCTAGTGATGGTTCGGATTCTGGAGTTGCGTCGGACGGATCGATTATTGAGAGTCGTCCGCAAATACCAAGCATCGTGGCCAAACGCAGTTGCCTGAAGCGTCGTTCCTCGGATCTGATACTCGCCGACAATGCGAAGCGAGTTAagcgaaatatcaaatttgatggCGTGAATGTCTTCTATTTCCAACGAGTGCAGGGAAACAGTTGCGTTCCGTCGCAGGGCGGATGTACACTCGGTATGGCCCGACATCATATGTACAATCGCACCTTTTCGTCGCTCTCTGAACATGCAGCCGAACAGAGACGCATTCATCGCTTACAGGACATGAACGCGAACAATTCGTCAACGGATGAGTCGGAAACGGAAGACGAAGCGAGTGAAAATAGCGGTTCTGATTTGGACGCCGAAACGAATGGATTCTTACAGCCTGTGCCTGCTCGACAGCGAAGAGTTATGCTGAAAACGGCTGGAGTGCTGAAAATCGACACAAATGAAAAGGATGAGTGCCGGAAGATTCGTACGTCGCGAGAGATGTGCGGCTGTAGTTGTAGTGGCTATTGCGATCCGGATACATGCTTTTGCAGCCAATCGGGTATTCAATGCCAGGTGGATCGACCAAATTTCCCATGCGGCTGTTCACGGCACGGTTGCGACAATGTGGTTGGTCGTGTAGAATTCGATCCGGAACGTGTCCGGATTCATTTCATTCACACAATTTTACGCTTAGAATTAGAAAACAAGCAAAATCGATCGGAAGAGATCGTGTTCAAAAATGATGTGTCACGGCAATGGCATCCGCAAACCCGACCGCCCGATATCAGTGCGTCCGGCTCAATTAGTGATTTTTCCAATTGTAACTACGGCTCGGTCGCCTTTGACAACCTATCCCATCGAAGTAGCACGTCAATGGCCGCTGATCGAACCATGAAAGACTATGATCGAACCAATCAATCGATGCCATCACATTCGGATACtagtaatttaattgaattggcCAACCGGCCGTCGGACGATGATACGTTAAATTTACACTACGATTACCGCAACGAGGAATTCAGCACTGAGTCGCTGATAAATTCGAACATCGTCACGGATATCGTCGATAAAGGCGGCGACGTCGGTACCGTTAATAGCTTTAATTCGAcgtttaatgaatttttggaGCGAACATACAACTTAGGAGGTACAGATCATTACCAACACCATTCCGCTTTTTTATCGTCACCGCATAGTGGATCCACATCGTCGGGCATAGTTGATTCATCGACCATCGACAACATTCCCTACGTCCTTTGTGATGAACCGATACCAAATAGTGACACTGCAATACCATCAACATCGTCGCAACATTTCGCCACCAAACTGGATGGCGGAGCGTCGCTACTGCACAATGACATCGCCGAAtttcgaaatagtgaggcgaATGCGACGGAATCGAATGAAAAGCAACAATTGGATGATTCGATGCGTGCCGATGTGATCACGGAATTGTTGAACCATGAAATTGATGTTGAAGAGGAAATACCATCGGTCATGGTAACACTGGAATCGAGTAAAACGTGTGGAACGGTTGAAGATGAAGATTTCTCGTTGTGCGTTACCGACGACGAAGAGTGTGcggataaaaatgaattgaataatttataa
- Protein Sequence
- MFKSILNSIQKNVIGATIFGKSPTMSTSDETIPAEPIPLIDVNDDPITLNSSTEETENTVDALAECDDPLCDPLALDDSSVSTELADVADKTLTDLKAASDGQIILIDVNILRNVEQNELIGSRDIQTEDLIETIEEGVPSDGSDSGVASDGSIIESRPQIPSIVAKRSCLKRRSSDLILADNAKRVKRNIKFDGVNVFYFQRVQGNSCVPSQGGCTLGMARHHMYNRTFSSLSEHAAEQRRIHRLQDMNANNSSTDESETEDEASENSGSDLDAETNGFLQPVPARQRRVMLKTAGVLKIDTNEKDECRKIRTSREMCGCSCSGYCDPDTCFCSQSGIQCQVDRPNFPCGCSRHGCDNVVGRVEFDPERVRIHFIHTILRLELENKQNRSEEIVFKNDVSRQWHPQTRPPDISASGSISDFSNCNYGSVAFDNLSHRSSTSMAADRTMKDYDRTNQSMPSHSDTSNLIELANRPSDDDTLNLHYDYRNEEFSTESLINSNIVTDIVDKGGDVGTVNSFNSTFNEFLERTYNLGGTDHYQHHSAFLSSPHSGSTSSGIVDSSTIDNIPYVLCDEPIPNSDTAIPSTSSQHFATKLDGGASLLHNDIAEFRNSEANATESNEKQQLDDSMRADVITELLNHEIDVEEEIPSVMVTLESSKTCGTVEDEDFSLCVTDDEECADKNELNNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00246319;
- 90% Identity
- iTF_00246319;
- 80% Identity
- -