Bodo010988.1
Basic Information
- Insect
- Bradysia odoriphaga
- Gene Symbol
- Mblk-1
- Assembly
- GCA_016920775.1
- Location
- JAFDOW010000598.1:5794746-5846949[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 1.9e-13 49.7 0.1 1 45 294 339 294 339 0.96 2 2 7.2e-19 1.3e-15 56.7 0.0 1 43 698 741 698 743 0.95
Sequence Information
- Coding Sequence
- ATGGGACGCAGGAAATGGAAACTATATCAAGAAGTTCTTGCACGTTCACAATCGAATTCTATTCAAGCAAATTCAACAGATACAGAAAACATTTGCAACAAGGAACAAACAATACAACAGGAACAACTAGACGAAGTCGACATAGAACAGGAAAAAAAGAGAGTGTCCGACAAACACATAAAAGACGAAGACGTGACAGAAACGGAACCCAGCGATATCACGAAAGAAGCATTAAaTTCTGTAGAATTGGACAAagagcaaacaaaagtaaaagaaaattccagCAGTGTGTCAACTGAtgacaaaaaattacaacaatcAATTGACTGGAAACCACAAAATAAGTGTTATTTTTGCGTAGACGGTAAATTGGTCACCGTGAACGAACGAGGGGATTTTGTGACCGAGTCAGGTTCGGTGCAGTCCGAACCAGATCTCGTTAACAGAACATCAGTTGAGTCGGATAGTGACTCTAGTGATTGTTCTGATGCTGAAATTCAGGATCCCATTCTAAACACACCACCCAAATCAGTTACAGAATTATTGAGAAATTCGTTGTCACAACATAATATGACTTCTTATGAATCTATGGCTGCCCAGTTAGCTACAATTGCATCACTTAATGGCTTTCCTTCCATGTACCCTGGCCTTTTATACAATCAATTTGTTCAGCAAATGCAATCGGCTCAAACTGAACCAGTGGCATCAGTTAGCAGTCCAAACGCGAAACCATCATCAAGTGCCACTGAATCAACAGCGGAGCAACCCCTGGATCTTAGTGCAAAACCTTCTAATGCTCCCATGTTCCACCAACACGATTCGAAACAGGTGTACAGAGCCAAACCACGCATGTCAACTGTACCAGGAAGACGAACGTATACGGAAGAGGAGCTTCAAAGTGCCCTTCAGGATATTTTGAGTGGTAAACTAGGAACGAGACGGGCAGCTGTTCAATATGGCATACCCCGATCAACATTACGAAATAAAGTGTATAAACTTGCAATGGAGCAGAAACGGGAGGCAACGCTATTGCCACCAGCGACTGTGTTAGATTTGGACAATGACAATGATGACAATGAACTGTCAGGAAATGAAGACGACAAAGACATAGAAAAAGTGATAAGTAATTGTATGAGTCAGGCGAACGTACTGAGATTGTCATCTCGAACGTCCACGTCGGGAATGTCGAACTTTCCCAATCCATTCGATAACAGTTCGCTGAAACAAGATGTAGCAAAAGAACCATCCAAACCTCCCACTACGTCAACACCACAGACACCACAAACGCCGCCAATAATAAACAATCCATGGCTGGACCCCGTTGTATTACAAAACCTTATTCTCGGTGGTTTTATGCAGCAAAAGTATGACGATCCTGCATTTCAAGAACTTTTTCGAAACCTATTGATACAGCAGCAGGAATTGATGAaagaacaaatgaaaaactCACTAGGAACGAACATCGATGCGGTGAACAATGGAAATCCAATTAATCCAGATGTTCGAAATATAATgcaaaatttttcattgctaCATCATCAGCAAATGCAAAATCGAGCAGTCAAACGAGAAACGCCAGAAACAACATCATCTAATGATCCCGGTGAGGATGCTGCTGTGATACTTAAAATTCCGTCCTTCAAGCCATTAGTAGGATCGTCGTCTGGAAAGAATGGTGACAATAACAGTGACACAGCCTCACAAACAACACCACCAATACCATCACGTAGTCCACTTAGTCACAATTCAGACATGTCGCCATCAATACTGCGGTCTGCCAACGACTCACAATCACCTCCAATCAATGTTGCTGGTAAAAGTCAACTGTCGCTACGAGACGTTATTGCGAAAAGCATAACGCGAACATTCAATCAACAAAGTCCCGATCTTGTGAGTAAGCCTTCTATGGATCATATTGAGCCGTACAAAGGTCCCAGCATATCGGTCATCAAAAATTTAGGTGgcacagatatatcgagattcGCGACTAGTCCCAACATGATGGGATCGATGAATTCAAATGCCAATATGCAATCGGTTGGTATTGGTGGCAAAGGAACCCGTCCAAAGCGTGGTAAATATCGAAATTATGACAGAGATAGTTTGGTTGAAGCTGTCAAAGCAGTTCAGCGCGGTGAAATGTCTGTGCACAGAGCTGGAAGTTATTATGGTGTACCACATTCTACTTTAGAGTATAAAGTGAAGGAAAGACACTTAATGCGTCCTAGAAAACGAGAGCCGAAACCCCAACCGTTAGACGGTTGTGGGAACAACTCGTCGCTAACAATAAAATCCGATGACATAACGGCATCTTCCTCATCAGGTATGAGAGCTATGGACAAAAGTAAACCGCTGTCAACAAAGTCGACTAAATCATCTTCCTATCCAGCCACACCTCCAAACGGTCTCAAAATGGGAATGTTTGATCCAGCCCAACTCCAATATGGTCCACATTTGTTTTGGCCACACCCGCCTGGATATTCTGGATTACCATTAGATTTCACACGATCTCCGGCCACTGGATCAACATCCGCATTTCCTGCAAATGCTGAAAGTTATTTTGCTTCACAAATGATGCATAGATTTCAAGATGACGCCCGACAAAGCGGCGTAAGTAGCTCAATGGCAAAGTCAACAACCATCAGCAACCAATCAAAATCAGCCAGAGAACTTGCCGAAAGTCTATACGACGGTGCAAGTACAAACGGTTCGTTTCTCGACGGCATTATACGACATAGTTTGGATCGCAAAACTGGTGATAATTCACACGGCACACTGTTAGATCAATTAGTGAAAAATAATCGACATTCCGATGAAGGCTCGAGCAAACGACCGGGTAGCCCAATAAATTTTGCTCAATCGGAAATAAAACGCGAACGAGCTAGTCCTTCATCCGGCGAAACCGATAAGGATTCATGCGATTACGAAATACCAAAAGAATCGGTCGAAACACTGATGAAATATCGGGAAATTTTGAAGCAAGGATCGGacgaaaaatgtctgaaaagttcggtagaaaatttaaacggaaattcacccataaacaaagtgacacaACATTCTGAAAAGGACGACAGTTCATGA
- Protein Sequence
- MGRRKWKLYQEVLARSQSNSIQANSTDTENICNKEQTIQQEQLDEVDIEQEKKRVSDKHIKDEDVTETEPSDITKEALNSVELDKEQTKVKENSSSVSTDDKKLQQSIDWKPQNKCYFCVDGKLVTVNERGDFVTESGSVQSEPDLVNRTSVESDSDSSDCSDAEIQDPILNTPPKSVTELLRNSLSQHNMTSYESMAAQLATIASLNGFPSMYPGLLYNQFVQQMQSAQTEPVASVSSPNAKPSSSATESTAEQPLDLSAKPSNAPMFHQHDSKQVYRAKPRMSTVPGRRTYTEEELQSALQDILSGKLGTRRAAVQYGIPRSTLRNKVYKLAMEQKREATLLPPATVLDLDNDNDDNELSGNEDDKDIEKVISNCMSQANVLRLSSRTSTSGMSNFPNPFDNSSLKQDVAKEPSKPPTTSTPQTPQTPPIINNPWLDPVVLQNLILGGFMQQKYDDPAFQELFRNLLIQQQELMKEQMKNSLGTNIDAVNNGNPINPDVRNIMQNFSLLHHQQMQNRAVKRETPETTSSNDPGEDAAVILKIPSFKPLVGSSSGKNGDNNSDTASQTTPPIPSRSPLSHNSDMSPSILRSANDSQSPPINVAGKSQLSLRDVIAKSITRTFNQQSPDLVSKPSMDHIEPYKGPSISVIKNLGGTDISRFATSPNMMGSMNSNANMQSVGIGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGCGNNSSLTIKSDDITASSSSGMRAMDKSKPLSTKSTKSSSYPATPPNGLKMGMFDPAQLQYGPHLFWPHPPGYSGLPLDFTRSPATGSTSAFPANAESYFASQMMHRFQDDARQSGVSSSMAKSTTISNQSKSARELAESLYDGASTNGSFLDGIIRHSLDRKTGDNSHGTLLDQLVKNNRHSDEGSSKRPGSPINFAQSEIKRERASPSSGETDKDSCDYEIPKESVETLMKYREILKQGSDEKCLKSSVENLNGNSPINKVTQHSEKDDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00245319;
- 90% Identity
- iTF_00245319;
- 80% Identity
- -