Bcop000891.1
Basic Information
- Insect
- Bradysia coprophila
- Gene Symbol
- Mblk-1
- Assembly
- GCA_014529535.1
- Location
- NW:589298-664151[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-16 1.9e-13 49.7 0.1 1 45 292 337 292 337 0.96 2 2 1.4e-18 1.3e-15 56.7 0.0 1 43 696 739 696 741 0.95
Sequence Information
- Coding Sequence
- ATGGAAACTATATCAAGAAGTTCTTGCACGTTCACAATCGAATTCTATTCAAGCAAATTCAACAGATACAGtttccCAACAGAAAACATTTGCAACAAGGAACAAACAATACAACAGGAACTAGACGAAGTCGACATAGAACAGGAGAAAAAGAGAGTGTCCGACAAACACATAAAAGACGAAGACGTGACAGAAACGGAACCAAGCGATATCACGAAAGAAGCATTAAATTCTGTAGAATTGGACAAAGagcaaacaaaagtaaaagaaaattccagCAGTGCGTCAActgatgacaaaaaattacCACAATCAATTGACTGGAAACCACAAAATAAGTGTTATTTCTGCGTAGACGGTAAATTGGTCACCGTGAACGAACGAGGGGATTTTGTGACCGAGTCAGGTTCGGTGCAGTCCGAACCAGATCTCGTTAACAGaACATCAGTTGAGTCGGATAGTGACTCTAGTGATTGTTCTGATGCTGAAATTCAGGATCCCATTCTAAACACACCACCCAAATCCGTTACAGAATTATTGAGAAATTCGTTGTCACAACATAATATGACTTCTTATGAATCTATGGCTGCCCAGTTAGCTACAATTGCATCACTTAATGGCTTTCCTTCCATGTACCCTGGCCTTTTATACAAtcaatttgttcaacaaatgcAATCGGCTCAAACTGAACCAGTGGCATCAGTTAGCAGTCCAAACGCGAAACCATCATCAAGTTCCACTGAATCAACAGCGGAGCAACCACTGGATCTTAGTGCAAAGCCTTCTAATGCTCCCATGTTTCACCAACACGATTCGAAACAGGTGTACAGAGCCAAACCACGCATGTCAACTGTACCAGGAAGACGAACGTATACGGAAGAGGAGCTTCAAAGTGCCCTTCAGGATATTTTGAGTGGTAAACTAGGAACGAGACGGGCAGCTGTTCAATATGGCATACCCCGATCAACATTACGAAATAAAGTGTATAAACTTGCAATGGAACAGAAACGGGAGGCAACATTATTGCCACCAGCGACTGTGTTAGATTTGGACAATGACAATGATGACAATGAACTTTCGGGAAATGAAGACGACAAAGACATAGAAAAAGCGATAAGTAATTGTATGGGTCAGGCGAACGTACTGAGATTATCATCTCGATCGTCCACGTCGGGAATGTCGAACTTTCCGAATCCATTCGATAACAGTTCACTGAAACAAGATGTCGCAAAAGAACCATCCAAACCTCCCACTACGTCAACACCACAGACACCACAAACACCGCCAATAATAAACAATCCATGGCTGGACCCCGTTGTATTACAAAACCTTATTCTCGGTGGTTTTATGCAGCAAAAGTATGACGATCCTGCATTTCAAGAACTCTTTCGAAACCTATTGATACAGCAGCAGGAATTGATGaaagaacaaatgaaaaactcACTAGGAACGAACATCGATGCGGTGAACAATGGAAATCCAATTAATCCAGATGTTCGAAATATAATGcacaatttttcattgctACATCATCAGCAAATGCAAAATCGAGCAGTCAAACGAGAAACGCCAGAAACAACATCATCTAATGATCCCGGTGAGGATGCTGCTGTGATACTTAAAATTCCGTCCTTCAAGCCATTAGTAGGATCGTCGTCTGGAAAGAATGGTGACAATAACAGTGACACAGCCTCACAAACAACACCACCAATACCATCACGTAGTCCACTCAGTCACAATTCGGACATGTCGCCATCAATACTACGGTCTGCCAACGACTCACAATCACCTCCAATCAATGTTGCCGGTAAAAGTCAACTGTCGCTGCGAGACGTTATTGCGAAAAGCATAACGCGAACATTCAATCAACAAAGTCCCGATCTTGTGAGTAAGCCTTCTATGGATCACATTGAGCCGTACAAAGGTCCCAGCATATCggttattaaaaatttaggtGGCACGGATATATCGCGATTCGCGACCAGTCCCAACATGATGGGATCGATGAATTCTAATGCCAATATGCAATCGGTCGGTATTGGTGGCAAAGGAACCCGTCCAAAGCGTGGTAAATATCGAAATTATGACAGAGATAGTTTGGTTGAAGCTGTCAAAGCAGTTCAGCGCGGTGAAATGTCTGTGCACAGAGCTGGAAGTTATTATGGTGTACCACATTCTACATTAGAGTATAAAGTGAAGGAAAGGCACTTAATGCGTCCTAGAAAACGAGAGCCGAAACCCCAACCATTAGATGGTTGTGGGACCAATTCGTCGCTAACAATAAAATCCGATGACATAACGGCATCTTCCTCATCAGGTATGAGAGCTATGGACAAAAGTAAACCGCTGTCAACAAAGTCGACTAAATCATCTTCCTATCCAGCCACACCTCCAAACGGTCTCAAAATGGGAATGTTTGATCCAGCACAACTCCAATATGGTCCACATTTGTTTTGGCCACACCCGCCTGGATATTCTGGATTACCATTAGATTTCACACGATCTCCGGCCACTGGATCAACATCCGCATTTCCTGCAAATGCTGAAAGTTATTTTGCCTCACAAATGATGCATAGATTTCAAGATGACGCCCGACAAAGTGGCGTAAGTAGCTCAATGGCAAAGTCAACCACCATCAGCAACCAATCAAAATCAGCCCGAGAACTTGCCGAAAGTCTTTACGACGGTGCAAGTACAAACGGTTCGTTTCTCGACGGCATCATACGACATAGTTTAGATCGCAAAACTGGTGATACTTCACACGGCACACTGTTAGATCAATTAGTGAAAAATAATCGACATTCCGATGAAGGTTCGAGCAAACGACCGGGTAGCCCAATAAATTTTGCTCAGTCGGAAATAAAACGCGAACGAGCTAGTCCGTCATCCGGCGAAACCGATAAGGATTCATGCGATTACGAAATACCAAAAGAATCGGTCGAAACACTGATGAAATATCGGGAAATTTTGAAGCAAGGATCGGACGAAAAGTGTCTGAAAAGTTCGGTAGAAAATTTAAACGGAAATTCAcccataaacaaagtgacacaACATTCTGAAAAGGACGACAGTTCATGA
- Protein Sequence
- METISRSSCTFTIEFYSSKFNRYSFPTENICNKEQTIQQELDEVDIEQEKKRVSDKHIKDEDVTETEPSDITKEALNSVELDKEQTKVKENSSSASTDDKKLPQSIDWKPQNKCYFCVDGKLVTVNERGDFVTESGSVQSEPDLVNRTSVESDSDSSDCSDAEIQDPILNTPPKSVTELLRNSLSQHNMTSYESMAAQLATIASLNGFPSMYPGLLYNQFVQQMQSAQTEPVASVSSPNAKPSSSSTESTAEQPLDLSAKPSNAPMFHQHDSKQVYRAKPRMSTVPGRRTYTEEELQSALQDILSGKLGTRRAAVQYGIPRSTLRNKVYKLAMEQKREATLLPPATVLDLDNDNDDNELSGNEDDKDIEKAISNCMGQANVLRLSSRSSTSGMSNFPNPFDNSSLKQDVAKEPSKPPTTSTPQTPQTPPIINNPWLDPVVLQNLILGGFMQQKYDDPAFQELFRNLLIQQQELMKEQMKNSLGTNIDAVNNGNPINPDVRNIMHNFSLLHHQQMQNRAVKRETPETTSSNDPGEDAAVILKIPSFKPLVGSSSGKNGDNNSDTASQTTPPIPSRSPLSHNSDMSPSILRSANDSQSPPINVAGKSQLSLRDVIAKSITRTFNQQSPDLVSKPSMDHIEPYKGPSISVIKNLGGTDISRFATSPNMMGSMNSNANMQSVGIGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDGCGTNSSLTIKSDDITASSSSGMRAMDKSKPLSTKSTKSSSYPATPPNGLKMGMFDPAQLQYGPHLFWPHPPGYSGLPLDFTRSPATGSTSAFPANAESYFASQMMHRFQDDARQSGVSSSMAKSTTISNQSKSARELAESLYDGASTNGSFLDGIIRHSLDRKTGDTSHGTLLDQLVKNNRHSDEGSSKRPGSPINFAQSEIKRERASPSSGETDKDSCDYEIPKESVETLMKYREILKQGSDEKCLKSSVENLNGNSPINKVTQHSEKDDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00246248;
- 90% Identity
- iTF_00246248;
- 80% Identity
- -