Bcop006240.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bradysia coprophila
Gene Symbol
ZFY
Assembly
GCA_014529535.1
Location
NW:8369147-8375516[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.37 16 6.1 0.2 6 23 109 126 103 126 0.87
2 23 0.1 4.4 7.8 0.7 1 23 132 154 132 154 0.96
3 23 1.6e-06 6.9e-05 22.9 0.2 2 23 159 180 159 180 0.98
4 23 0.0032 0.14 12.6 0.3 1 23 186 210 186 210 0.97
5 23 7.7e-05 0.0033 17.6 2.7 2 23 237 258 236 258 0.96
6 23 5e-06 0.00022 21.4 1.3 1 23 264 286 264 286 0.99
7 23 1.4e-05 0.00061 20.0 2.2 1 23 292 315 292 315 0.96
8 23 0.0045 0.19 12.1 2.5 1 23 324 347 324 347 0.96
9 23 1.2e-07 5.1e-06 26.5 0.2 1 23 454 476 454 476 0.98
10 23 2.1e-06 8.9e-05 22.6 0.5 1 23 482 506 482 506 0.98
11 23 0.15 6.5 7.3 5.2 1 21 542 562 542 564 0.95
12 23 2.1e-05 0.00092 19.4 1.2 1 23 615 637 615 637 0.98
13 23 0.0075 0.32 11.4 2.7 1 23 643 665 643 665 0.97
14 23 0.002 0.088 13.2 0.9 1 23 671 693 671 693 0.96
15 23 0.0032 0.14 12.5 3.1 2 23 700 721 699 721 0.96
16 23 3.6e-05 0.0015 18.7 0.8 3 23 943 963 942 963 0.98
17 23 0.00017 0.0075 16.5 2.7 1 23 969 992 969 992 0.94
18 23 0.003 0.13 12.6 1.0 1 23 999 1021 999 1021 0.95
19 23 7.7e-06 0.00033 20.8 4.1 1 23 1027 1049 1027 1049 0.98
20 23 0.00088 0.038 14.3 0.2 1 23 1131 1153 1131 1153 0.97
21 23 1.1e-07 4.5e-06 26.7 1.2 2 23 1158 1179 1157 1179 0.97
22 23 3.5e-06 0.00015 21.9 2.0 1 23 1185 1207 1185 1207 0.96
23 23 0.00068 0.029 14.7 3.7 1 21 1213 1233 1213 1234 0.95

Sequence Information

Coding Sequence
ATGGAATTCGTTACCGAGTTTGATTTAACCAATCAACAGATTGTTTTATTGAATGACATTGACATTGTGTCGGGACACGAACACAGTCCCACCGATTTTATCAATTGTCCCGTTGGTGACTTAGGACTCGAGCAAATACAGTATCCTGAGTGCAACTCAGATGAACCAAACAATCATCCATCGAATGGTGACGGGCACCAGCAACATCAATTCCAAATCATAAAACAGCGGAACGGCAATCGCTATATGAAATTCAAGAAATccaagaaaaatgtgaaaacaaaACTTGTTGATCAACAACCACAACAGTGTCCTGTCGTGCCGTGCCGGGCAGTATTCAccagtaaattgaaattgagaaaACATGTCCAGGAGCATGCATTCAAGAAGCAACATCGCTGCGACACTTGCCTTGAAGAGTTTAACGTGCTGGAAAACCTTATGCTGCACACATCGTTGCATTCGAATGATGGTCGTTGTCCGCAATGTGGAAAAGTGTTTCGACGATTGGCCAGTTTGGAAGGGCACATCAAAACGCATTTCAAAAGTGAATACTACACATGCACGCAGGGCTGTGACGAAATGTTCCCTCTGGAATGGATGTTAAAGCAGCACATGAACCAATTCCATCCGACCGAAAGTTCAAAAGGTCAACAAGAAAAGGAAGAGCTAGCCAAACAGCGAAAATTGAAACGACGAAATCTGCTTAGCTGCCAATACTGTGGCAAgcaattcacaaaaaattgccTACTGATACGGCACGAACGGATTCACAACGGGCATAAACCATTTCAATGTGATAGATGTGACCGGAGCTTCGCTCAGAAGAACACTTTGGTCATACACCAGCGCAGACACTCCGATCATCGAATGTATCAGTGCCCACACTGTCCGCAAACATTTGTTCAGAAAGGGAATCTGCTGTCGCACGTAGCCAAATGCCACACATACAAGGAGGGCGAGCCGAGTTTTCCGTGCAACCAATGCTCGTGCACGTTCAAGAAAATCGGTACTTTGAACGCCCACATCAGCAAGTTCCATGCAGCGCAGAGCGTACTGGTCGACGATGATCTCGGATTCAAATTGGACGATGTGATGAAGGAACTGAACGATCTGCATCGATCGAATTCATTGGAGAATGAGCTGATATCCAAGGATCTGTTTTTCAATCTTCCCGTCATTATGCCGCCGACAACACCCGAAGAGatTCCAAATACGGTAGGCGATGGCGATAAACAGTCGGACTATGCAAACGCAACGAATGCTACACAAAGCTCATTAAAACTGGCTGTTCATACGAGCAACGGAATGGTTACACATCGCAGTGTAATGCAACGAATTCATGGTAATGTGCGCTGCTATGTGTGCCTGTACTGTCCGAAAGAATTTCGTCGTCCCTCCGACCTTGTTCGTcatatacgaattcacacaaaGGAGAAGCCATTTTCCTGTCCGATCGCGAATTGTGGCAAGAAATTTTCGGTCAAAAGTTCGCTGAGCAAACATCTCAACACCCATTCGAAATCGTCACAGCAACACGCCTGCGGTGTATGTCTGCAGACATTTCAGAGTGCCGAAACCTTCGACGAACATTGTTCGCTTACACACCAGGACAATCCAATATTTCAGTGCTTCATTTGCTCACGACTGTGCGTCACAAATGCGGATCTGAAGCGTCACTTAAAATGTCATCGATCGCCGGTCAAAAAGCCCGTACGGCAACAGGAATGTGAAGACGATGGTATCCAACTGGAGATTGTTATGAAAGAACCGATAATGTTGACCGACGATGGACAAATTGAAGTGGCGGCGGAGAAATCTGTGCCCGATCAGGAACGAAAGTTTGAGTGCTCGGTGTGTCCCAGTACGTTTAAACGCAACGGCCATTTAAAAGAACACATTTTGTCTCACCTGGGAGTTAAGTCTCACAAATGTGAGATATGCTTCAAGTCCTTCGGTAAAATGAGCATCTTAAATCGACACATGTTGTATCATTCCAACGAAAAGAAGTTCAATTGTGGAACTTGTAACGCCAGCTTCATCTCAAACAATCAACTGAGTCGGCACAGCTTAAAGCATACAAATCAACGGAATGTCATGTGTCCCTACTGTCAGAAACGTTTCAAATCCAAAGCAACTTGCCGCACCCATTTGCAAATCCACAAAACCCAGTGGATGAAGCAGTTCAAAGAGCAATTAAAATCGGGAACAATTCAATTCGAAGAGGACGTGACACTCGGTCAACCGAACGACCAGCCGGCACTCGATGTCGTGACATCGGCCACAAACGAACGCCTGTTGGAATCGTTAAACAATGACAACGCCGATGCGTTTCACGAAACGGTCCAACGTAGCGAAGAGAGCAACCAAGTTTTGTTCACCAATTTGGTGCAAGACGCTCAGATGGACGACTCGCGAAATCAGTTTGAATATTTCCTGTTGTTGCCGTCAAACGGAGATCCGAATTGCATTGCAACCGATGGTAGATCGGATGGTGAACAGCAGTTCGTTGTGGACGATGATCAGCTCAATTTTGCCAATTTACAGTTTATTCAGCTGGATCAGTCGGCCTTGTTAGAATTGGGAAATACTGCAACGGAAACCGTTACTTCGTTGGCAAAACACCGACTGAACGACAATGAGTTGAACCGACCGGAAATGGTTTCGAATACTGATTGCAGTGAGTCACAAGTGCCTGTACCTGAGTCTGATAGACCTGATAGAAATGACTACGTGTCAATGGAATCgtcgaaagaaattcaattggCGAACAAACAGTTGACAAATGCGCAGAGGACTAGAAAGTCCACAAAGTCCATCAACAATTGCGAGACTTGCTCGAAAGTCTTCCAAAAACCAATCGACCTTCGTCGACACATTCGAACCCATACTTTAGAAAAGCCTTTCAGCTGTTCCAACTGCCCGAAATCGTTCAGCCTCAAAAGCACCTTACAGAATCACAACAAGAACAAACACTCCGACATGAAAGAGATGCATCCCTGTACGGTATGTTGGAAGGCATTCTCGTCGAAGCATGCGGTCATCACCCATTCGCTAATCCATTCCAATTCGCGTCCATTCAAATGCGAATACTGTACGACGACATTTCGAACGCGTGGCCATTTGAAAATCCATCAGCAAATCCATCTGAGGGAGGGACGAAAGTTGGGTGTGAATCCGTCGGagattaaaacgaaaaaagagaAAGCGAAACTGTTGCCGCTGATAAATGTGATGCAAGAGTTCGGTGACCCGAATGTTTACGAAGAGTTTGTCGATCAGAGTGGATTCGTTGAGGAAATGCCCGATTCAACGGTATTTAGAGTGGAGCGATCGGACACTGACACGGACAACCAGATGGTCAATACCGAATCTCTAACAAATACAATTTACCAGTGCTCCTTATGCCCGGAACAATTCAACGACAAGGACAGTTACAGTGCCCATGCAGCCAGCCACAAAGaAAACCTTCGTTGTCCTGATTGCCACAAAGTGTTTAGGAAACCAAGTCTCTTGAAGCGACACATGATTGTGCATTACGGTCGAAAGGaatttacatgcaaaatttgcCACAAATCTTATACTCAAAAAGCGACACTGCAAGCGCATATGGGCCTGCATACGGACGGCGCTTCGTTCGAGTGTTCGCAGTGTCacaaaaagttcaatttcaaaacgaatcTTACGACCCACGAACGACAATGCAGTTTGTTGAACAACCGAACACCATCGGAATATCACATCGGAATCTCGTag
Protein Sequence
MEFVTEFDLTNQQIVLLNDIDIVSGHEHSPTDFINCPVGDLGLEQIQYPECNSDEPNNHPSNGDGHQQHQFQIIKQRNGNRYMKFKKSKKNVKTKLVDQQPQQCPVVPCRAVFTSKLKLRKHVQEHAFKKQHRCDTCLEEFNVLENLMLHTSLHSNDGRCPQCGKVFRRLASLEGHIKTHFKSEYYTCTQGCDEMFPLEWMLKQHMNQFHPTESSKGQQEKEELAKQRKLKRRNLLSCQYCGKQFTKNCLLIRHERIHNGHKPFQCDRCDRSFAQKNTLVIHQRRHSDHRMYQCPHCPQTFVQKGNLLSHVAKCHTYKEGEPSFPCNQCSCTFKKIGTLNAHISKFHAAQSVLVDDDLGFKLDDVMKELNDLHRSNSLENELISKDLFFNLPVIMPPTTPEEIPNTVGDGDKQSDYANATNATQSSLKLAVHTSNGMVTHRSVMQRIHGNVRCYVCLYCPKEFRRPSDLVRHIRIHTKEKPFSCPIANCGKKFSVKSSLSKHLNTHSKSSQQHACGVCLQTFQSAETFDEHCSLTHQDNPIFQCFICSRLCVTNADLKRHLKCHRSPVKKPVRQQECEDDGIQLEIVMKEPIMLTDDGQIEVAAEKSVPDQERKFECSVCPSTFKRNGHLKEHILSHLGVKSHKCEICFKSFGKMSILNRHMLYHSNEKKFNCGTCNASFISNNQLSRHSLKHTNQRNVMCPYCQKRFKSKATCRTHLQIHKTQWMKQFKEQLKSGTIQFEEDVTLGQPNDQPALDVVTSATNERLLESLNNDNADAFHETVQRSEESNQVLFTNLVQDAQMDDSRNQFEYFLLLPSNGDPNCIATDGRSDGEQQFVVDDDQLNFANLQFIQLDQSALLELGNTATETVTSLAKHRLNDNELNRPEMVSNTDCSESQVPVPESDRPDRNDYVSMESSKEIQLANKQLTNAQRTRKSTKSINNCETCSKVFQKPIDLRRHIRTHTLEKPFSCSNCPKSFSLKSTLQNHNKNKHSDMKEMHPCTVCWKAFSSKHAVITHSLIHSNSRPFKCEYCTTTFRTRGHLKIHQQIHLREGRKLGVNPSEIKTKKEKAKLLPLINVMQEFGDPNVYEEFVDQSGFVEEMPDSTVFRVERSDTDTDNQMVNTESLTNTIYQCSLCPEQFNDKDSYSAHAASHKENLRCPDCHKVFRKPSLLKRHMIVHYGRKEFTCKICHKSYTQKATLQAHMGLHTDGASFECSQCHKKFNFKTNLTTHERQCSLLNNRTPSEYHIGIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00246519;
90% Identity
iTF_00246519;
80% Identity
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