Bcop008180.1
Basic Information
- Insect
- Bradysia coprophila
- Gene Symbol
- SUB1
- Assembly
- GCA_014529535.1
- Location
- NW:6420290-6421256[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.078 1.3e+03 -1.1 0.2 3 18 38 53 36 54 0.80 2 2 1e-26 1.6e-22 78.6 0.5 1 51 66 117 66 118 0.97
Sequence Information
- Coding Sequence
- ATGTCGTCTAAGGACAAAAAGAAGGCTAAGCTATCCGAATCAGAATCAGCATCGTCATCGTCGTCGTCAGACTCTGACAGTTCACCGCCACCACGAAAAGATGCCAAAACGAAATCGAAATCGGCAAATGTTTCGGTTGAATCGGCAAAGGGGAAGACCAATAGTCTACGAGTCGCTGGAGAGAAGGAGCCAACGTGGGAACTGGGTTCCAAGAAATTCATTACGATTGGCGACTTTAAGGGCAAGACATACATCAACATACGTGAATATTACACGGATGCCAAAGGTGACGTCAAGCCAGGGAAGAAGGGAATCGGACTGAACATCGAACAATGGCAAAACCTTTGCAACAGCATCGATGAAGTCAACCAAGTTTTGAAGTAA
- Protein Sequence
- MSSKDKKKAKLSESESASSSSSSDSDSSPPPRKDAKTKSKSANVSVESAKGKTNSLRVAGEKEPTWELGSKKFITIGDFKGKTYINIREYYTDAKGDVKPGKKGIGLNIEQWQNLCNSIDEVNQVLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00246337;
- 90% Identity
- iTF_00246337;
- 80% Identity
- -