Bcop005593.1
Basic Information
- Insect
- Bradysia coprophila
- Gene Symbol
- dl
- Assembly
- GCA_014529535.1
- Location
- NW:5675967-5680231[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-54 5.3e-51 172.8 0.0 1 169 7 177 7 177 0.96 2 2 2.1 4.7e+03 -2.8 0.0 85 121 410 447 399 455 0.61
Sequence Information
- Coding Sequence
- ATGTATAATAATGTGAAAGTGGAAATTATTGAACAGCCTCAACCAAAATCAATGAGGTTTCGTTATTCTAGTGAAGGAAATTCGGCCGGTTCTATTTTTGGAGTGAACAGCACAGAAGACGCGAAAACCTATCCATCGATTCGTATACTTAATTACGAAGGAGCCGCCCGTGTTTGTGTATCATGTGTTACGATCGATGAGATTCCCAAGCCACATCCAAATTGCTTGGTGGGAAAGCCGTGCAGCGAAGGAATTTGTGTGTTCAATTTTACTACGAAAGCTGCATCGCCCAGACGTGTTACATTTCCACAACTCGGAATTCAATGCCCGAAACTCATTGAAGTTAAAGAAAATCTGGAAAAGCGACAGGCACAGAATATTGATCCATTCAAGACTGGTTTTGGACATAAGGAACTAAAATCGATTAACCTACATCAAATGCGGCTGTGCTTTCAAGTCTTTCTTATACCAGATCCCGCAAAGAACCTGATCCCACTGGAACCAGTCGTTTCTGACATTATATGCGACAAAAAGACAAATGTCAAATTACGGATCTTCGAAAAAAGCGATAATTACAGTGCCGCATGTggtgataaaaaaattatcattctTTGCGATAAGGTGGACAAACGAGACATTAGAGTGCGATTCTATGAGACCGGTACGGATAATTCCGTCATCTGGCTGGATTGGGCAAAATTCCAACCGAAAGATGTCCACAAGCAAGTGGCTATATCGTTCCGAACTCCGAAATACAGAGATCAAACAATAACTAAGCCGGTGAATGTCTTCTTTCAGCTGGAAACCATATCCGATGGAACCTGCAGTGACCCGATACCATTTCAATATGTACCCGACAATACAAACATTGAATTGGCTTTGAACAACAAAGTAGACAAAATTGACCATTCCAAAGCATTATACGAATTCTTACAAGTGCTCGAAACATCTAACATGACATATGACTTCGACGCGAATGTGACTGGCGCTGACTATCAATTGTCATCTGCTCAAGCTAATTGTGATGAATCACACCACTACAATCAACAGCAACACTACTCAGCAACGACCCAGTTCAATAAAGAATCTAAATGTGGGAATTCTTTAGCGTTCGGAAATGTGAACAATACAAATGCAACCAGTACGAATTCGAATAACTTCTTCAGTCGAAGTGTTCAACCAGGAAGCTATCAGAGTTACCAGACCGATAATTGTCCGACTCCACTGAATTGCGATAAATTAACTCATCATTCGTGTCAGCAGGTGGGCCCTGTTTATACAGCCGACAAAGTGataatacaacaatttcacaACAGCAATGTTACGATAAATCAACCGCAGAATGTTGTGGACGTACCAATGAGTGATGTTTTAAGTTCCGAAATGAATGTATTTTGA
- Protein Sequence
- MYNNVKVEIIEQPQPKSMRFRYSSEGNSAGSIFGVNSTEDAKTYPSIRILNYEGAARVCVSCVTIDEIPKPHPNCLVGKPCSEGICVFNFTTKAASPRRVTFPQLGIQCPKLIEVKENLEKRQAQNIDPFKTGFGHKELKSINLHQMRLCFQVFLIPDPAKNLIPLEPVVSDIICDKKTNVKLRIFEKSDNYSAACGDKKIIILCDKVDKRDIRVRFYETGTDNSVIWLDWAKFQPKDVHKQVAISFRTPKYRDQTITKPVNVFFQLETISDGTCSDPIPFQYVPDNTNIELALNNKVDKIDHSKALYEFLQVLETSNMTYDFDANVTGADYQLSSAQANCDESHHYNQQQHYSATTQFNKESKCGNSLAFGNVNNTNATSTNSNNFFSRSVQPGSYQSYQTDNCPTPLNCDKLTHHSCQQVGPVYTADKVIIQQFHNSNVTINQPQNVVDVPMSDVLSSEMNVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -