Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294047.1:53149204-53153378[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 3e-05 0.0017 19.6 1.4 1 23 101 123 101 123 0.97

2 31 0.00011 0.006 17.9 7.6 1 23 129 151 129 151 0.96

3 31 2e-06 0.00011 23.3 2.6 1 23 159 181 159 181 0.97

4 31 6.6e-07 3.7e-05 24.8 0.3 1 23 187 209 187 209 0.98

5 31 0.00011 0.0062 17.8 2.2 1 23 215 237 215 237 0.97

6 31 9.4e-05 0.0053 18.0 1.6 1 23 243 265 243 265 0.99

7 31 0.00039 0.022 16.1 1.8 1 23 271 293 271 293 0.97

8 31 0.00063 0.036 15.4 3.1 1 23 300 322 300 322 0.98

9 31 4.2e-07 2.4e-05 25.4 1.6 1 23 328 350 328 350 0.98

10 31 7.9e-08 4.5e-06 27.7 0.8 1 23 356 378 356 378 0.97

11 31 4.5e-06 0.00025 22.2 0.7 1 23 388 411 388 411 0.97

12 31 2.4 1.4e+02 4.2 0.1 8 23 464 479 463 479 0.94

13 31 1e-06 5.7e-05 24.2 1.2 1 23 701 723 701 723 0.97

14 31 4.6e-07 2.6e-05 25.3 2.3 1 23 733 755 733 755 0.97

15 31 4e-06 0.00023 22.3 2.2 1 22 765 786 765 786 0.95

16 31 5.2e-06 0.0003 22.0 1.5 1 21 797 817 797 818 0.94

17 31 1.8e-06 0.0001 23.5 1.4 1 23 829 851 829 851 0.98

18 31 4e-07 2.3e-05 25.5 3.2 1 23 860 883 860 883 0.98

19 31 8.9e-06 0.0005 21.3 0.4 1 23 913 935 913 935 0.97

20 31 5.1e-05 0.0029 18.9 0.4 1 23 947 969 947 969 0.92

21 31 8.3e-05 0.0047 18.2 0.9 1 23 977 999 977 999 0.97

22 31 3.4e-06 0.0002 22.6 1.3 1 23 1010 1032 1010 1032 0.98

23 31 0.23 13 7.4 4.9 1 23 1038 1061 1038 1061 0.97

24 31 0.053 3 9.4 2.2 1 23 1067 1089 1067 1089 0.96

25 31 7.7e-06 0.00044 21.5 5.6 1 23 1096 1118 1096 1118 0.99

26 31 1.2e-06 6.7e-05 24.0 0.5 1 23 1124 1146 1124 1146 0.96

27 31 2e-08 1.1e-06 29.6 0.6 1 23 1152 1174 1152 1174 0.97

28 31 1.7e-05 0.00095 20.4 1.6 1 23 1180 1202 1180 1202 0.98

29 31 0.00015 0.0088 17.4 0.0 1 23 1208 1230 1208 1230 0.98

30 31 0.033 1.9 10.0 5.5 1 23 1237 1259 1237 1259 0.98

31 31 7.9e-05 0.0045 18.3 1.9 1 21 1265 1285 1265 1286 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	3e-05	0.0017	19.6	1.4	1	23	101	123	101	123	0.97
2	31	0.00011	0.006	17.9	7.6	1	23	129	151	129	151	0.96
3	31	2e-06	0.00011	23.3	2.6	1	23	159	181	159	181	0.97
4	31	6.6e-07	3.7e-05	24.8	0.3	1	23	187	209	187	209	0.98
5	31	0.00011	0.0062	17.8	2.2	1	23	215	237	215	237	0.97
6	31	9.4e-05	0.0053	18.0	1.6	1	23	243	265	243	265	0.99
7	31	0.00039	0.022	16.1	1.8	1	23	271	293	271	293	0.97
8	31	0.00063	0.036	15.4	3.1	1	23	300	322	300	322	0.98
9	31	4.2e-07	2.4e-05	25.4	1.6	1	23	328	350	328	350	0.98
10	31	7.9e-08	4.5e-06	27.7	0.8	1	23	356	378	356	378	0.97
11	31	4.5e-06	0.00025	22.2	0.7	1	23	388	411	388	411	0.97
12	31	2.4	1.4e+02	4.2	0.1	8	23	464	479	463	479	0.94
13	31	1e-06	5.7e-05	24.2	1.2	1	23	701	723	701	723	0.97
14	31	4.6e-07	2.6e-05	25.3	2.3	1	23	733	755	733	755	0.97
15	31	4e-06	0.00023	22.3	2.2	1	22	765	786	765	786	0.95
16	31	5.2e-06	0.0003	22.0	1.5	1	21	797	817	797	818	0.94
17	31	1.8e-06	0.0001	23.5	1.4	1	23	829	851	829	851	0.98
18	31	4e-07	2.3e-05	25.5	3.2	1	23	860	883	860	883	0.98
19	31	8.9e-06	0.0005	21.3	0.4	1	23	913	935	913	935	0.97
20	31	5.1e-05	0.0029	18.9	0.4	1	23	947	969	947	969	0.92
21	31	8.3e-05	0.0047	18.2	0.9	1	23	977	999	977	999	0.97
22	31	3.4e-06	0.0002	22.6	1.3	1	23	1010	1032	1010	1032	0.98
23	31	0.23	13	7.4	4.9	1	23	1038	1061	1038	1061	0.97
24	31	0.053	3	9.4	2.2	1	23	1067	1089	1067	1089	0.96
25	31	7.7e-06	0.00044	21.5	5.6	1	23	1096	1118	1096	1118	0.99
26	31	1.2e-06	6.7e-05	24.0	0.5	1	23	1124	1146	1124	1146	0.96
27	31	2e-08	1.1e-06	29.6	0.6	1	23	1152	1174	1152	1174	0.97
28	31	1.7e-05	0.00095	20.4	1.6	1	23	1180	1202	1180	1202	0.98
29	31	0.00015	0.0088	17.4	0.0	1	23	1208	1230	1208	1230	0.98
30	31	0.033	1.9	10.0	5.5	1	23	1237	1259	1237	1259	0.98
31	31	7.9e-05	0.0045	18.3	1.9	1	21	1265	1285	1265	1286	0.93

Sequence Information

Coding Sequence: ATGAGTGAGCCAAAGAAAAGAGGCAGAAAAAAGAAGgtgaaaaaagttgtagaaGAGGACGATAGCGACGATGAGTTTTTAATCGCCAAAATAACTCCCAAAAAGAAAAAGGAGAAGAAAGAAAGTGAAAATGAAGATGATAATGATGACaatgaagaaaaagaagaagaagaaggcgGGGCTAAATCCGGGAGCGACTGGGAGCAAGAAATCGTGTGCGAAGTGGACGTAGAAATTGACGaaaacgtcaaaacaaaaaagaagaagaaaaagagaaACAGAAAGAGCAAGAAGAAAGAACACATCTGCGAGTATTGTGCGAAAGTTTTCACGCTGAAATACAACCTAAAAGCGCACTTGTTGACGCACACGGGCGAAAAACCGCATGCCTGTACGTATTGCGACAAAAAATTCTCGCAAAAATGCAACTATATGCGCCATCTGAGGTCGCACTTCGGCAACCAAGACACAAACTTCGCTTGTGAAATTTGCGGCAGCACTTTTACGCAGAAAACCCACCTAAATCGGCACATGATGAAGCATAACGGAGAAAAGCCTTTTCCTTGCCCTTACTGCGAAAAAGGTTTCGTGGACCAGACTAATTTAACCCTTCACATCCGAAAACATACGGGAGAAAAACCATTTACGTGCGAGTGTTGTGGAAAAACTTTCGCACGCAAGACTCAACTTACTATTCACGCACGGGTCCATACAGGAGAAAAGCCCTACGTGTGCAGCTACTGTCAAAAAGCCTTCTTCCTGAAGAAGAGTCTCACCCTACACATGGAGACCCACATCGCCGTGAAGCCCTTCGCGTGCAGCTTCTGCAACTACCGCTACTCCAACGAAACCCTGCTAAGACGTCACATAACCACCCATACAGGTGAGCAAAAAACTCACGAATGTCCCCAATGCCAGAAAAAATGGTCGAGAAAGCACGATTTAATGATACACATGCGCATTCACACGGGCGAAAAGCCGCATCAATGTCAAATTTGCGGGAAAGACTTTGCGCGAAAACCTGATTTAACCAAGCATCTCCGCACGCATAGCGGCGAGAAACCTTTCGCCTGTACTTATTGCGAAAAAGCATTTTCTGATCAATCTAATCTTACTCAACACATACGGTCTCATACGGGTGAAAAACGCGGCGAAAAACGCTTTCCTTGTCCGAGCTGTCGCAAAACTTTTGCTTATGAATCTAACCTACAGCAACACATACGCATGCGCCATACGCAACAACCGGTGGTAGAAGTAAaacctcctcctcctcctcctcctgtGGTTCCCGAGAAACCATTGACGGATCAATTAAATACTTTATCGCAATATATATTACCCACCCTACCGGTAATAGAAAAACGTGCGGAAGAACCTACTAGTTACGAGAAATCTTTCGTAGATCCTTTTAACTTGGTACAACACTTTTTATCGCACGCTCAGGCGCAAGATAAACGGTATGGTTACGAAAAAACGTTTGATCACACACTTGGTAATGATAAACCCGTGGTTCCTGTGCGAAATTTTGACAAACCCATGTATCCGGATCAAACCAATTTACCGCAAAGTTTGTTAAACATAGGTGACAGGCGTGTGGAGAAACCTTACATGCCTCCCCAACAAATGAATTACGAGAAAACGTTTGAGGAACATTTGAATATGACGCAAAAACAACAACAGTTTTCGATGCCAATTTACGAAAAACCGAAACAGCAACAGTTCCATATGTCGAGTTACGAAAAACCGAAACCGCAACAGTTTTCTTTGTTGAATTATGAAAAACCAAAACAGCAGTTTACTTTGTCGAATTATGATAGACCTTTCCCTGGACAGTCTAATCTAATGAATATGATGGATATGCGTAGAGAAAACAAACCGTTTGGTTTGACAAATTACGAGAAAAGTTACGAAAAACCGTATGAAATGCATAACAGTAGTATCCAAAGTATCAATAGTATGGATAATGATCCTGACCATAGCCGTGATGACAGTGTTAGATCTTTCGGTGATTATATGGACTATGATACCAAACCTTATGAACAGCAAAACATTCCCCAACCTATTGTCCCTGAAGTAATAGAAAAACGCAAAGAAAAACCTTTTGCTTGCACTTACTGCGGAAAAAATTTCGCATATAAAACGAATCTAACGCAACATATTAGATTGCATACCGGGGAAAAGAGGGGGGACAAGCCATTTGCTTGTCCTCACTGTAAGAAAACTTTCGCGTATCAGTCCAACTTGCAACAGCACATTCAGTCGCATAGCGATGAAAAACGTGCGGAGAAACCGTACGCTTGTACACATTGCGACAAAAAGTTCAAATACCGATCAAATTTGATGCAACATATACGTTCGGTAACCGGCGAAAAACGTGCGGAAAAACCTTTTGCGTGCACACATTGCAACAAAACATTTGCGTATAAATCGAACCTTACGCAACATATTCAATCTGTAAGCGGAGAAAAACGAGGGGATAGAACGTACCCTTGTAACTTGTGCGATAAAAAATTCTCGTATAAATCTACCCTTACGCAACATATTTTATCACATACTGGCGAGACGTGCGAAAAACCGTTTAAATGTCACCTGTGCGATAAAGGTTTTGCGTATAAGTCAAATTTAACGCAACATATGCGAATCAGAcacaaaaattacgaaaaagcTTGTGCGGAGTTGTCAAATATAACGCAAGACATTTTATCGCATCCGGGTCAAGAGGAGAATAAGATCGCGTTTACTTGCACACAGTGCGATAAAACGTTTACCGACCAGCCGCTTTTAGCGCAACATATTTTACAGCATTTCGAGGAGAAAACCGtaaagaaagaaaaattgttCAACTGCGAAAAGTGCGATAAAACGTTTGCGAACGAGTCCACTTTAATTCGGCATTCTGCCGCGCACGACCTTGCTCCGGAAAAAGTTTTTACGTGCGAACAGTGTAGTAAATCGTTTAACGACGAAACTAAGCTTACGCAGCACATTTTGTGGCACGCTGTGGAGTCTGGTACGGAAAAAGCTACGTTCATTTGTTCGCAGTGCGATAAAACGTTCATGGATCAGTTAAATTTAACGCAACATATGAGGTCGCACACGGGCGAAAAACGGTTTAAGTGCGATTGTTGCGAGCTAAGTTTTTCGTCGAAATTAGATTTATGCTCGCATTTGAACAAAGTGCATGTAGATGAATTGCCGCACCAATGTTGTATGTGCGAGTTTAGATTCGCCACAGAACCGTTGCTAAACAAGCACGTTTTGGCGCACACAGGGGATATCAAACAGTTCCAATGTCCGCATTGCGATAAAAAGTGTGCGAGAAAACACGATCTCACTGTACATATAAGAATACACACGGGCGAAAAACCGCACGCGTGCGCTATTTGCGATAAAGTTTTCGCACGCAAGCCGGATTTAACGAAACATATGCGCTTGCATAGCGGCGAGAAACCGTTCGATTGTACCTATTGCGATAAATCGTTTGCGGACCAATCGAATTTAACCGCACACATTCGCTCGCATACGGGCGAGAAAAAATACAAGTGCGATTTTTGCGATTACAGTTTCGGTTTGAAGTCGCACCTAGCTCGGCATATGATCGTACACACCCGAGAAAAGCCTTTTGTTTGTGAAGTTTGCGAGGAAGCCTATCCGCAAAAATCGTTACTTGACAGACACATGATCTCGCACACTGGCGAGAAGAAAATTCATAAATGTCCGTACTGCGAGAAAAAATGGGCACGGAGACATGACATGCACGTGCATATCCGCACTCATACCGGAGAAAAACCGCACGTTTGTCCGTATTGCGAAAAAGAGTTTACCCGGAAACCGGATTTGACGCGGCACAAACACACGTGCAGACAGGCGAAGCCGAACATGGACAACCCGTCGGGTATGCCCGATCCGACCGCGCTGGATTTGATGCAATATATGAAGATTGAGTTGGGGGATATTCATCCGGTGAAATTAGAATGA
Protein Sequence: MSEPKKRGRKKKVKKVVEEDDSDDEFLIAKITPKKKKEKKESENEDDNDDNEEKEEEEGGAKSGSDWEQEIVCEVDVEIDENVKTKKKKKKRNRKSKKKEHICEYCAKVFTLKYNLKAHLLTHTGEKPHACTYCDKKFSQKCNYMRHLRSHFGNQDTNFACEICGSTFTQKTHLNRHMMKHNGEKPFPCPYCEKGFVDQTNLTLHIRKHTGEKPFTCECCGKTFARKTQLTIHARVHTGEKPYVCSYCQKAFFLKKSLTLHMETHIAVKPFACSFCNYRYSNETLLRRHITTHTGEQKTHECPQCQKKWSRKHDLMIHMRIHTGEKPHQCQICGKDFARKPDLTKHLRTHSGEKPFACTYCEKAFSDQSNLTQHIRSHTGEKRGEKRFPCPSCRKTFAYESNLQQHIRMRHTQQPVVEVKPPPPPPPVVPEKPLTDQLNTLSQYILPTLPVIEKRAEEPTSYEKSFVDPFNLVQHFLSHAQAQDKRYGYEKTFDHTLGNDKPVVPVRNFDKPMYPDQTNLPQSLLNIGDRRVEKPYMPPQQMNYEKTFEEHLNMTQKQQQFSMPIYEKPKQQQFHMSSYEKPKPQQFSLLNYEKPKQQFTLSNYDRPFPGQSNLMNMMDMRRENKPFGLTNYEKSYEKPYEMHNSSIQSINSMDNDPDHSRDDSVRSFGDYMDYDTKPYEQQNIPQPIVPEVIEKRKEKPFACTYCGKNFAYKTNLTQHIRLHTGEKRGDKPFACPHCKKTFAYQSNLQQHIQSHSDEKRAEKPYACTHCDKKFKYRSNLMQHIRSVTGEKRAEKPFACTHCNKTFAYKSNLTQHIQSVSGEKRGDRTYPCNLCDKKFSYKSTLTQHILSHTGETCEKPFKCHLCDKGFAYKSNLTQHMRIRHKNYEKACAELSNITQDILSHPGQEENKIAFTCTQCDKTFTDQPLLAQHILQHFEEKTVKKEKLFNCEKCDKTFANESTLIRHSAAHDLAPEKVFTCEQCSKSFNDETKLTQHILWHAVESGTEKATFICSQCDKTFMDQLNLTQHMRSHTGEKRFKCDCCELSFSSKLDLCSHLNKVHVDELPHQCCMCEFRFATEPLLNKHVLAHTGDIKQFQCPHCDKKCARKHDLTVHIRIHTGEKPHACAICDKVFARKPDLTKHMRLHSGEKPFDCTYCDKSFADQSNLTAHIRSHTGEKKYKCDFCDYSFGLKSHLARHMIVHTREKPFVCEVCEEAYPQKSLLDRHMISHTGEKKIHKCPYCEKKWARRHDMHVHIRTHTGEKPHVCPYCEKEFTRKPDLTRHKHTCRQAKPNMDNPSGMPDPTALDLMQYMKIELGDIHPVKLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00244431;
90% Identity: iTF_00244431;
80% Identity: iTF_00244431;