Basic Information

Gene Symbol
-
Assembly
GCA_958510825.1
Location
OY294047.1:53149204-53153378[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.072 74 4.4 1.7 14 39 98 120 92 129 0.83
2 25 0.12 1.2e+02 3.7 4.1 18 41 130 150 122 152 0.88
3 25 0.055 56 4.8 1.7 6 39 151 178 150 182 0.73
4 25 0.44 4.5e+02 1.9 0.1 19 41 189 208 184 210 0.86
5 25 0.49 5e+02 1.7 4.1 14 30 212 229 205 238 0.75
6 25 4.4 4.5e+03 -1.3 3.4 8 39 291 319 286 329 0.77
7 25 0.0013 1.4 9.9 0.4 14 38 325 350 318 350 0.83
8 25 0.00058 0.59 11.1 0.1 18 41 357 377 353 379 0.90
9 25 0.0037 3.8 8.6 0.3 15 43 386 411 381 412 0.87
10 25 3.1e-05 0.032 15.2 0.1 12 40 696 721 688 724 0.88
11 25 0.0017 1.7 9.7 0.2 18 41 734 754 726 756 0.90
12 25 0.00014 0.14 13.1 1.7 15 41 763 786 754 787 0.85
13 25 5.8e-05 0.059 14.3 0.2 17 41 797 818 790 819 0.87
14 25 0.0063 6.4 7.8 1.1 19 39 831 848 826 856 0.87
15 25 0.00069 0.71 10.9 3.6 12 44 855 884 848 884 0.88
16 25 0.0035 3.6 8.6 0.8 4 38 933 965 930 965 0.91
17 25 0.71 7.2e+02 1.2 0.1 10 39 972 996 969 1002 0.80
18 25 0.98 1e+03 0.8 0.4 17 38 1010 1032 999 1033 0.71
19 25 0.074 76 4.4 1.7 5 30 1084 1109 1082 1118 0.82
20 25 0.044 45 5.1 0.1 18 38 1125 1146 1113 1146 0.81
21 25 0.013 14 6.8 0.4 13 41 1148 1173 1141 1175 0.80
22 25 6.2 6.3e+03 -1.8 0.8 14 23 1177 1186 1174 1202 0.59
23 25 1.2 1.2e+03 0.5 0.4 12 39 1203 1227 1189 1230 0.71
24 25 0.087 90 4.1 2.0 6 30 1226 1250 1221 1260 0.77
25 25 0.018 19 6.3 0.4 15 29 1263 1277 1252 1287 0.75

Sequence Information

Coding Sequence
ATGAGTGAGCCAAAGAAAAGAGGCAGAAAAAAGAAGgtgaaaaaagttgtagaaGAGGACGATAGCGACGATGAGTTTTTAATCGCCAAAATAACTCCCAAAAAGAAAAAGGAGAAGAAAGAAAGTGAAAATGAAGATGATAATGATGACaatgaagaaaaagaagaagaagaaggcgGGGCTAAATCCGGGAGCGACTGGGAGCAAGAAATCGTGTGCGAAGTGGACGTAGAAATTGACGaaaacgtcaaaacaaaaaagaagaagaaaaagagaaACAGAAAGAGCAAGAAGAAAGAACACATCTGCGAGTATTGTGCGAAAGTTTTCACGCTGAAATACAACCTAAAAGCGCACTTGTTGACGCACACGGGCGAAAAACCGCATGCCTGTACGTATTGCGACAAAAAATTCTCGCAAAAATGCAACTATATGCGCCATCTGAGGTCGCACTTCGGCAACCAAGACACAAACTTCGCTTGTGAAATTTGCGGCAGCACTTTTACGCAGAAAACCCACCTAAATCGGCACATGATGAAGCATAACGGAGAAAAGCCTTTTCCTTGCCCTTACTGCGAAAAAGGTTTCGTGGACCAGACTAATTTAACCCTTCACATCCGAAAACATACGGGAGAAAAACCATTTACGTGCGAGTGTTGTGGAAAAACTTTCGCACGCAAGACTCAACTTACTATTCACGCACGGGTCCATACAGGAGAAAAGCCCTACGTGTGCAGCTACTGTCAAAAAGCCTTCTTCCTGAAGAAGAGTCTCACCCTACACATGGAGACCCACATCGCCGTGAAGCCCTTCGCGTGCAGCTTCTGCAACTACCGCTACTCCAACGAAACCCTGCTAAGACGTCACATAACCACCCATACAGGTGAGCAAAAAACTCACGAATGTCCCCAATGCCAGAAAAAATGGTCGAGAAAGCACGATTTAATGATACACATGCGCATTCACACGGGCGAAAAGCCGCATCAATGTCAAATTTGCGGGAAAGACTTTGCGCGAAAACCTGATTTAACCAAGCATCTCCGCACGCATAGCGGCGAGAAACCTTTCGCCTGTACTTATTGCGAAAAAGCATTTTCTGATCAATCTAATCTTACTCAACACATACGGTCTCATACGGGTGAAAAACGCGGCGAAAAACGCTTTCCTTGTCCGAGCTGTCGCAAAACTTTTGCTTATGAATCTAACCTACAGCAACACATACGCATGCGCCATACGCAACAACCGGTGGTAGAAGTAAaacctcctcctcctcctcctcctgtGGTTCCCGAGAAACCATTGACGGATCAATTAAATACTTTATCGCAATATATATTACCCACCCTACCGGTAATAGAAAAACGTGCGGAAGAACCTACTAGTTACGAGAAATCTTTCGTAGATCCTTTTAACTTGGTACAACACTTTTTATCGCACGCTCAGGCGCAAGATAAACGGTATGGTTACGAAAAAACGTTTGATCACACACTTGGTAATGATAAACCCGTGGTTCCTGTGCGAAATTTTGACAAACCCATGTATCCGGATCAAACCAATTTACCGCAAAGTTTGTTAAACATAGGTGACAGGCGTGTGGAGAAACCTTACATGCCTCCCCAACAAATGAATTACGAGAAAACGTTTGAGGAACATTTGAATATGACGCAAAAACAACAACAGTTTTCGATGCCAATTTACGAAAAACCGAAACAGCAACAGTTCCATATGTCGAGTTACGAAAAACCGAAACCGCAACAGTTTTCTTTGTTGAATTATGAAAAACCAAAACAGCAGTTTACTTTGTCGAATTATGATAGACCTTTCCCTGGACAGTCTAATCTAATGAATATGATGGATATGCGTAGAGAAAACAAACCGTTTGGTTTGACAAATTACGAGAAAAGTTACGAAAAACCGTATGAAATGCATAACAGTAGTATCCAAAGTATCAATAGTATGGATAATGATCCTGACCATAGCCGTGATGACAGTGTTAGATCTTTCGGTGATTATATGGACTATGATACCAAACCTTATGAACAGCAAAACATTCCCCAACCTATTGTCCCTGAAGTAATAGAAAAACGCAAAGAAAAACCTTTTGCTTGCACTTACTGCGGAAAAAATTTCGCATATAAAACGAATCTAACGCAACATATTAGATTGCATACCGGGGAAAAGAGGGGGGACAAGCCATTTGCTTGTCCTCACTGTAAGAAAACTTTCGCGTATCAGTCCAACTTGCAACAGCACATTCAGTCGCATAGCGATGAAAAACGTGCGGAGAAACCGTACGCTTGTACACATTGCGACAAAAAGTTCAAATACCGATCAAATTTGATGCAACATATACGTTCGGTAACCGGCGAAAAACGTGCGGAAAAACCTTTTGCGTGCACACATTGCAACAAAACATTTGCGTATAAATCGAACCTTACGCAACATATTCAATCTGTAAGCGGAGAAAAACGAGGGGATAGAACGTACCCTTGTAACTTGTGCGATAAAAAATTCTCGTATAAATCTACCCTTACGCAACATATTTTATCACATACTGGCGAGACGTGCGAAAAACCGTTTAAATGTCACCTGTGCGATAAAGGTTTTGCGTATAAGTCAAATTTAACGCAACATATGCGAATCAGAcacaaaaattacgaaaaagcTTGTGCGGAGTTGTCAAATATAACGCAAGACATTTTATCGCATCCGGGTCAAGAGGAGAATAAGATCGCGTTTACTTGCACACAGTGCGATAAAACGTTTACCGACCAGCCGCTTTTAGCGCAACATATTTTACAGCATTTCGAGGAGAAAACCGtaaagaaagaaaaattgttCAACTGCGAAAAGTGCGATAAAACGTTTGCGAACGAGTCCACTTTAATTCGGCATTCTGCCGCGCACGACCTTGCTCCGGAAAAAGTTTTTACGTGCGAACAGTGTAGTAAATCGTTTAACGACGAAACTAAGCTTACGCAGCACATTTTGTGGCACGCTGTGGAGTCTGGTACGGAAAAAGCTACGTTCATTTGTTCGCAGTGCGATAAAACGTTCATGGATCAGTTAAATTTAACGCAACATATGAGGTCGCACACGGGCGAAAAACGGTTTAAGTGCGATTGTTGCGAGCTAAGTTTTTCGTCGAAATTAGATTTATGCTCGCATTTGAACAAAGTGCATGTAGATGAATTGCCGCACCAATGTTGTATGTGCGAGTTTAGATTCGCCACAGAACCGTTGCTAAACAAGCACGTTTTGGCGCACACAGGGGATATCAAACAGTTCCAATGTCCGCATTGCGATAAAAAGTGTGCGAGAAAACACGATCTCACTGTACATATAAGAATACACACGGGCGAAAAACCGCACGCGTGCGCTATTTGCGATAAAGTTTTCGCACGCAAGCCGGATTTAACGAAACATATGCGCTTGCATAGCGGCGAGAAACCGTTCGATTGTACCTATTGCGATAAATCGTTTGCGGACCAATCGAATTTAACCGCACACATTCGCTCGCATACGGGCGAGAAAAAATACAAGTGCGATTTTTGCGATTACAGTTTCGGTTTGAAGTCGCACCTAGCTCGGCATATGATCGTACACACCCGAGAAAAGCCTTTTGTTTGTGAAGTTTGCGAGGAAGCCTATCCGCAAAAATCGTTACTTGACAGACACATGATCTCGCACACTGGCGAGAAGAAAATTCATAAATGTCCGTACTGCGAGAAAAAATGGGCACGGAGACATGACATGCACGTGCATATCCGCACTCATACCGGAGAAAAACCGCACGTTTGTCCGTATTGCGAAAAAGAGTTTACCCGGAAACCGGATTTGACGCGGCACAAACACACGTGCAGACAGGCGAAGCCGAACATGGACAACCCGTCGGGTATGCCCGATCCGACCGCGCTGGATTTGATGCAATATATGAAGATTGAGTTGGGGGATATTCATCCGGTGAAATTAGAATGA
Protein Sequence
MSEPKKRGRKKKVKKVVEEDDSDDEFLIAKITPKKKKEKKESENEDDNDDNEEKEEEEGGAKSGSDWEQEIVCEVDVEIDENVKTKKKKKKRNRKSKKKEHICEYCAKVFTLKYNLKAHLLTHTGEKPHACTYCDKKFSQKCNYMRHLRSHFGNQDTNFACEICGSTFTQKTHLNRHMMKHNGEKPFPCPYCEKGFVDQTNLTLHIRKHTGEKPFTCECCGKTFARKTQLTIHARVHTGEKPYVCSYCQKAFFLKKSLTLHMETHIAVKPFACSFCNYRYSNETLLRRHITTHTGEQKTHECPQCQKKWSRKHDLMIHMRIHTGEKPHQCQICGKDFARKPDLTKHLRTHSGEKPFACTYCEKAFSDQSNLTQHIRSHTGEKRGEKRFPCPSCRKTFAYESNLQQHIRMRHTQQPVVEVKPPPPPPPVVPEKPLTDQLNTLSQYILPTLPVIEKRAEEPTSYEKSFVDPFNLVQHFLSHAQAQDKRYGYEKTFDHTLGNDKPVVPVRNFDKPMYPDQTNLPQSLLNIGDRRVEKPYMPPQQMNYEKTFEEHLNMTQKQQQFSMPIYEKPKQQQFHMSSYEKPKPQQFSLLNYEKPKQQFTLSNYDRPFPGQSNLMNMMDMRRENKPFGLTNYEKSYEKPYEMHNSSIQSINSMDNDPDHSRDDSVRSFGDYMDYDTKPYEQQNIPQPIVPEVIEKRKEKPFACTYCGKNFAYKTNLTQHIRLHTGEKRGDKPFACPHCKKTFAYQSNLQQHIQSHSDEKRAEKPYACTHCDKKFKYRSNLMQHIRSVTGEKRAEKPFACTHCNKTFAYKSNLTQHIQSVSGEKRGDRTYPCNLCDKKFSYKSTLTQHILSHTGETCEKPFKCHLCDKGFAYKSNLTQHMRIRHKNYEKACAELSNITQDILSHPGQEENKIAFTCTQCDKTFTDQPLLAQHILQHFEEKTVKKEKLFNCEKCDKTFANESTLIRHSAAHDLAPEKVFTCEQCSKSFNDETKLTQHILWHAVESGTEKATFICSQCDKTFMDQLNLTQHMRSHTGEKRFKCDCCELSFSSKLDLCSHLNKVHVDELPHQCCMCEFRFATEPLLNKHVLAHTGDIKQFQCPHCDKKCARKHDLTVHIRIHTGEKPHACAICDKVFARKPDLTKHMRLHSGEKPFDCTYCDKSFADQSNLTAHIRSHTGEKKYKCDFCDYSFGLKSHLARHMIVHTREKPFVCEVCEEAYPQKSLLDRHMISHTGEKKIHKCPYCEKKWARRHDMHVHIRTHTGEKPHVCPYCEKEFTRKPDLTRHKHTCRQAKPNMDNPSGMPDPTALDLMQYMKIELGDIHPVKLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00244464;
90% Identity
iTF_00244464;
80% Identity
iTF_00244464;