Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294053.1:2404377-2409888[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.014 14 6.7 0.6 12 37 134 156 125 165 0.74

2 24 0.033 34 5.5 2.4 15 39 165 186 153 190 0.80

3 24 0.026 27 5.8 2.0 17 29 195 207 186 218 0.81

4 24 0.007 7.2 7.7 2.6 11 41 218 244 209 246 0.77

5 24 0.39 4e+02 2.1 1.7 6 38 241 269 240 273 0.68

6 24 0.14 1.5e+02 3.5 1.8 13 41 275 300 269 304 0.80

7 24 0.57 5.9e+02 1.5 4.9 12 39 304 328 297 336 0.84

8 24 0.012 12 7.0 6.0 5 34 326 360 322 365 0.73

9 24 0.085 88 4.2 4.9 2 40 357 391 356 395 0.78

10 24 0.48 4.9e+02 1.8 1.5 15 39 397 418 389 422 0.76

11 24 0.0062 6.4 7.8 1.8 2 40 413 447 412 451 0.85

12 24 0.02 20 6.2 1.9 3 29 442 467 440 477 0.75

13 24 0.0045 4.6 8.3 0.7 12 38 582 609 572 613 0.81

14 24 1.1 1.2e+03 0.6 3.9 15 39 613 634 604 638 0.76

15 24 0.0088 9 7.3 2.8 18 40 644 663 640 665 0.83

16 24 0.14 1.4e+02 3.5 2.7 13 37 667 688 660 694 0.72

17 24 0.14 1.4e+02 3.5 1.6 13 30 695 714 688 722 0.75

18 24 0.029 30 5.7 0.5 15 30 753 770 743 778 0.75

19 24 0.0013 1.3 10.0 1.8 16 36 782 804 774 806 0.79

20 24 0.0043 4.4 8.3 1.1 14 30 808 826 803 840 0.80

21 24 0.019 20 6.3 1.1 14 33 839 860 825 864 0.70

22 24 5.8 6e+03 -1.7 0.2 14 29 867 882 860 885 0.77

23 24 0.0015 1.5 9.8 2.5 5 32 883 914 879 920 0.75

24 24 0.0004 0.41 11.6 3.9 6 38 916 947 912 949 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.014	14	6.7	0.6	12	37	134	156	125	165	0.74
2	24	0.033	34	5.5	2.4	15	39	165	186	153	190	0.80
3	24	0.026	27	5.8	2.0	17	29	195	207	186	218	0.81
4	24	0.007	7.2	7.7	2.6	11	41	218	244	209	246	0.77
5	24	0.39	4e+02	2.1	1.7	6	38	241	269	240	273	0.68
6	24	0.14	1.5e+02	3.5	1.8	13	41	275	300	269	304	0.80
7	24	0.57	5.9e+02	1.5	4.9	12	39	304	328	297	336	0.84
8	24	0.012	12	7.0	6.0	5	34	326	360	322	365	0.73
9	24	0.085	88	4.2	4.9	2	40	357	391	356	395	0.78
10	24	0.48	4.9e+02	1.8	1.5	15	39	397	418	389	422	0.76
11	24	0.0062	6.4	7.8	1.8	2	40	413	447	412	451	0.85
12	24	0.02	20	6.2	1.9	3	29	442	467	440	477	0.75
13	24	0.0045	4.6	8.3	0.7	12	38	582	609	572	613	0.81
14	24	1.1	1.2e+03	0.6	3.9	15	39	613	634	604	638	0.76
15	24	0.0088	9	7.3	2.8	18	40	644	663	640	665	0.83
16	24	0.14	1.4e+02	3.5	2.7	13	37	667	688	660	694	0.72
17	24	0.14	1.4e+02	3.5	1.6	13	30	695	714	688	722	0.75
18	24	0.029	30	5.7	0.5	15	30	753	770	743	778	0.75
19	24	0.0013	1.3	10.0	1.8	16	36	782	804	774	806	0.79
20	24	0.0043	4.4	8.3	1.1	14	30	808	826	803	840	0.80
21	24	0.019	20	6.3	1.1	14	33	839	860	825	864	0.70
22	24	5.8	6e+03	-1.7	0.2	14	29	867	882	860	885	0.77
23	24	0.0015	1.5	9.8	2.5	5	32	883	914	879	920	0.75
24	24	0.0004	0.41	11.6	3.9	6	38	916	947	912	949	0.92

Sequence Information

Coding Sequence: atgcagGACAACAGTATTGATGATAAAAGCTCACTAAAAATTGATGAGTTAGAAGTTAATGATAATCTCAGaccacaaaatttaataaatctacGAGGAAACGAAgacgaaattttatttaaaaacgaaatgCCGATAAAGTTGGAGAAAGAATACGAAGACATCAAAATTGAGACTGTTGAACAGGATGTTGAATATCATATTAAAGATGAAGAAATGGATTTTGATATTAAACCAGAACTTATAGatatactaaattttaatacatttgtGGGCATAAATCTTGATATAAGAGAACAAGATATCAAAtctgaaaatgtaaaaatggaaaatttaattGATAACGAGCTTCACGACTCTTCACATGATTCCTTTTACAATAAAATGCATCTTCCTAACACTGATAAGAAACCATTTCGATGCTCTTATTGTAAAAAGGAGTTCGCAGAAAAAGCACATTTAATTCCACATATTCGTACACATACTTTAGAAAAACCATTTGAGTGCTCCCACTGTGATAAGAAATTCGCAACAAAATCCAATTTAACCGCACATACTCGTACACATACATTTGAGAAGCCATTTGAATGCTCCTACTGTAACAAGAAATTTACAAGAAGAGGTTATTTAGGCGTACATATTCGTACACATACAGATGGGAAACTATTTGAGTGCTCCTATTGCAATAAGAAATTGATAACAAATTCAAGTTTAACCCAACATATTCGTAGACATACGGGCGAGAAGCCATTTGAGTGCTCCTATTGCGATAAGAAATTTCCAACAAATTCTTCTTTAAGAATCCATATGGTTACTCATACAACTGAGAAGCCATTTGTATGCGCCCATTGCAGTAATAAATTCCCAAGCAAATCTCGTTTAGTCGTGCATATTCGTACACATATGTGTACAACCGAAAAGTCATTTGAGTGTTCCTCTTGTAATAAGAAATTCACGACAAATTCTTCTTTAAAAAGACATGTTCTTACACATACAGCTGCAGTTTCTCAGCTATCTGAGAAGCTGTTTAAATGTTCCTATTGCAATaagaaattttcaacaaattcttcTTTAAAATGCCATATTCGTTATCATACAGCTGATAAGCAATTTGAATGCTCCTACTGCAATAAGAAATTCATAAGCAAATATCGTTTAATCGTTCATATTCGTACACATACAGGCGAGAAGCCATTTGAATGCCCCTATTGCGATAAGAAATTCATAGCAAATTCTTCTTTAAAAAGACATGTTTCTAATCATACAGCTGAAAAGCCATTTGAGTGCTCCTATTGCAATAAGAAATTTCCAACAAATTCTTCTTTAAAATCCCATATTCGTATACATACAGCTGTTAAGCCATTTGAATGCTTCTATTGTAATAAGAAATTCAACTACAGTACTGATGATAAAAACTCACTAAAAACTGATGAATTAAAAGTTAATGATTTTAACCCTAGaccacaaaatttaataaatctacAAGGAAACGAAgaggaaaatattttatttaatattgaaaTGGCGATAAAGTTagagaaagaaataaaaattgagaCTGTTGAAAATGATGTTgaatatcaaattaaaaatgaagaaatGGATTTTGATATTAAACCAGACCTTAtggatataaaaatttttaatacatttgaAGACATGAATCTTGAAATGAGAGAACAAGACATCAAATCTGATAATGTAAAAACGGAACATATAATTGATAACGAGCCTCTTCCTAATACTGATAAGAAACCATTTCGATGCTCCTATTGTAAAAAGGACTTAGCAAGCAAAGCTCATTTAACTGAACATGTTCGTACACATACTTTAGATAAACCATTTGAGTGCTCCTGCTGTGATAagaaattcgcaaaaaaatccaatttaacCGCACATACCCGTACACATAAAGATGTGAGGCCATTTGAATGTTCCTACTGTAACAAGAAATTTTCAAGAAATCATAGTCTACGAGTTCATATTCGTACACATACAAATGAAAAACCATTTGAATGTTCATATTGTTATAAgaaatttacaacaaaatcAAGCTTAACCGAACATATTCTTACACATACAGGCGAAAAGTCATTTAAATGCACCTATTGTATTAAGACGTTCATAAGAAAACGATATTTACTTGAACATAATTTTACACATATGGGTGAAAACCCGTTTGAGTGCTCCAATTGTAATATGACATTCCCAAGGAAACGAGATTTACTTGAACATAATTTTACACatacaggagaaaaaccatttGAGTGTTCCTATTGTAATAAGACATTCCTAAGAAAACGAGATTTACTTGAACATAATTTTACACATACAGGTGAAAAACCATTTGAGTGCTCCTATTGTAACAAAAACTTCACAAGAAAATCACATTTAGTTAGTCATAATCTTACACATACATATGAGAAACGATTTGAATGTTcctattgtaataaaaaattcgCAAGAAAGCCTGATTTAAAAAAGCATACTTTTATACACACAGATGATCATCTCGAGAAGCCTTTTAAATGCTCCCATTGCGATAAGCAGTTTGCAAAAAATTCTTCGTTAAACACCCACATTCTTACACATACAGAAGATAAGCCATTTGAATGCTCCAATTGCGATAAAAAATTTgcaacaaaacattatttgtaCCAGCATAGTTTTACGCACAGAGATGAGAAGGAATTTGAATGTTCCTACTGTAGTAAGAAATTTGCAAGAAAATTTCGTTTAACAGAACATATTCGTATACATACCGATGAAAGGCTTGAATGCTCCTATTGTAGTaagaaatatacaaaaaaatggtCTTTAACAAAACATCTTCGTACACATACAGAAGCCATTTGA
Protein Sequence: MQDNSIDDKSSLKIDELEVNDNLRPQNLINLRGNEDEILFKNEMPIKLEKEYEDIKIETVEQDVEYHIKDEEMDFDIKPELIDILNFNTFVGINLDIREQDIKSENVKMENLIDNELHDSSHDSFYNKMHLPNTDKKPFRCSYCKKEFAEKAHLIPHIRTHTLEKPFECSHCDKKFATKSNLTAHTRTHTFEKPFECSYCNKKFTRRGYLGVHIRTHTDGKLFECSYCNKKLITNSSLTQHIRRHTGEKPFECSYCDKKFPTNSSLRIHMVTHTTEKPFVCAHCSNKFPSKSRLVVHIRTHMCTTEKSFECSSCNKKFTTNSSLKRHVLTHTAAVSQLSEKLFKCSYCNKKFSTNSSLKCHIRYHTADKQFECSYCNKKFISKYRLIVHIRTHTGEKPFECPYCDKKFIANSSLKRHVSNHTAEKPFECSYCNKKFPTNSSLKSHIRIHTAVKPFECFYCNKKFNYSTDDKNSLKTDELKVNDFNPRPQNLINLQGNEEENILFNIEMAIKLEKEIKIETVENDVEYQIKNEEMDFDIKPDLMDIKIFNTFEDMNLEMREQDIKSDNVKTEHIIDNEPLPNTDKKPFRCSYCKKDLASKAHLTEHVRTHTLDKPFECSCCDKKFAKKSNLTAHTRTHKDVRPFECSYCNKKFSRNHSLRVHIRTHTNEKPFECSYCYKKFTTKSSLTEHILTHTGEKSFKCTYCIKTFIRKRYLLEHNFTHMGENPFECSNCNMTFPRKRDLLEHNFTHTGEKPFECSYCNKTFLRKRDLLEHNFTHTGEKPFECSYCNKNFTRKSHLVSHNLTHTYEKRFECSYCNKKFARKPDLKKHTFIHTDDHLEKPFKCSHCDKQFAKNSSLNTHILTHTEDKPFECSNCDKKFATKHYLYQHSFTHRDEKEFECSYCSKKFARKFRLTEHIRIHTDERLECSYCSKKYTKKWSLTKHLRTHTEAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00244473;
90% Identity: iTF_00244473;
80% Identity: iTF_00244473;