Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294053.1:521229-523109[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.029 30 5.7 4.8 21 43 151 170 133 171 0.74

2 16 0.018 18 6.3 7.2 16 43 175 199 172 227 0.88

3 16 0.01 11 7.1 6.6 17 43 233 256 218 262 0.85

4 16 0.61 6.3e+02 1.4 3.5 15 40 260 282 257 290 0.79

5 16 0.0013 1.3 10.0 4.2 3 43 277 313 275 320 0.78

6 16 4.1 4.2e+03 -1.2 1.3 6 28 308 330 303 342 0.74

7 16 0.011 11 7.0 3.7 17 40 347 367 326 377 0.79

8 16 4.5 4.6e+03 -1.3 4.0 3 28 362 387 360 399 0.77

9 16 0.0017 1.7 9.7 4.7 17 43 404 427 389 428 0.85

10 16 0.46 4.7e+02 1.8 2.4 17 39 433 452 429 453 0.74

11 16 4.4e-06 0.0045 17.9 6.2 2 39 447 480 446 487 0.88

12 16 0.0038 3.9 8.5 2.7 18 39 490 508 483 518 0.85

13 16 0.0012 1.2 10.2 0.2 18 41 518 538 509 541 0.87

14 16 0.55 5.7e+02 1.6 3.1 17 28 545 556 538 568 0.82

15 16 4 4.1e+03 -1.2 1.3 17 28 573 584 558 596 0.77

16 16 0.00015 0.16 13.0 1.8 18 40 602 621 589 624 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.029	30	5.7	4.8	21	43	151	170	133	171	0.74
2	16	0.018	18	6.3	7.2	16	43	175	199	172	227	0.88
3	16	0.01	11	7.1	6.6	17	43	233	256	218	262	0.85
4	16	0.61	6.3e+02	1.4	3.5	15	40	260	282	257	290	0.79
5	16	0.0013	1.3	10.0	4.2	3	43	277	313	275	320	0.78
6	16	4.1	4.2e+03	-1.2	1.3	6	28	308	330	303	342	0.74
7	16	0.011	11	7.0	3.7	17	40	347	367	326	377	0.79
8	16	4.5	4.6e+03	-1.3	4.0	3	28	362	387	360	399	0.77
9	16	0.0017	1.7	9.7	4.7	17	43	404	427	389	428	0.85
10	16	0.46	4.7e+02	1.8	2.4	17	39	433	452	429	453	0.74
11	16	4.4e-06	0.0045	17.9	6.2	2	39	447	480	446	487	0.88
12	16	0.0038	3.9	8.5	2.7	18	39	490	508	483	518	0.85
13	16	0.0012	1.2	10.2	0.2	18	41	518	538	509	541	0.87
14	16	0.55	5.7e+02	1.6	3.1	17	28	545	556	538	568	0.82
15	16	4	4.1e+03	-1.2	1.3	17	28	573	584	558	596	0.77
16	16	0.00015	0.16	13.0	1.8	18	40	602	621	589	624	0.88

Sequence Information

Coding Sequence: atggaAGGGCTTAGTATAAAGATAAAGGAAGAAATTGAGATTCAGGAGGATCATTTGGAATGGATAAAGCCAGAACCTTCAGGTGAAGGTTTTAAAATGAAGAAAGCTGTTGATATAAAGATAGAGgaagaaattaaaattcaagAAGATCAAATGAAAATTGGAATAAAGCAAGAACATATAGGTGAAGGTTTTGAAACAGAAATTGAGGAAACATTTTGTAACAATGGAGATAAaggtgattttaattttaacgataataagatattttcaaaagaaGATATTTTTATCCTGAATGAAgaacatattaaaaaagaaattgtagGGCAAGAACACAGTGATAATGAAGATATTAGAAAAGGAAAAGAACAAGTTTTAGATAAATTAGTCGAAGAAAATGTGGAAAAACATTTAAGAAGCTCAcctaatgaaaatttttgttgtAGCTTATGTTGTATGAAAAGTTTTTCCACAAAAACTGGCTTAAAAAGGCATATTCGATCATATCACACTGGGGAGAGATCTTATAAATGCAAGTACTGTGAAAAAACCTTTTCGCAATCATCACATTTAGCAGCACATATTGATTTTAATCATACTGCAAAAAGACCCCATAAATGCACGAATTGTGAAAAGGCCTTCTTCCGATTATCACATTTAAAAACACATAGCCGCACTCATACTGGGGAAAGACCTTTTAAATGCAAGTActgtgaaaaaacttttttgcaatcATCACATTTAAAATCACATATTAATTCTGGTCATACTGGGAAAAAAAACCATAAATGCACACATTGtgaaaaggatttttttgaattatcacTTTTAAAAAGACATATTCGCATTCATACTGGGGAGAGACCTCATAAATGCAAGTACTGTGAAAAAACCTTTTCGCAATCATCACATTTAGCATCACATGTTGATTTTAATCATACTGCGAAAAGACCCCATAAATGCACGAATTGTGAAAAGGCCTTTTTCCGATTATCAGATTTAAAAACACATAGCCGCACTCATACTGGGGAAAGACCCTTTAAATGTAAGTACTGTGAAAAAACTTATTTGCAATCATCACATTTAAAAACACATGTTAATTTTCTTCATACTGCAGAAAGACCCCATAAATGCAAGAATTGTGAAAAGGCCTTTTTCCGATTATCAGATTTAAAAACACATAGCCGCACTCATACTGGGGAAAGACCCTTTAAATGTAAGTACTGTGAAAAAACTTATTTGCAATCATCacatttaaaaacacatattaaTTCTGGTCATACTGGGAAAAAAACCCATAAATGCACACATTGTGAAAAGGCTTTTTTTGAATTATCACTTTTAAAAAGACATATCCGCATTCATACTGGGAAAAATACCTATAAATGCAAGTACTGTGAAAAGACCTTTTCGCAATctacaaatttaaaaagacaTATTTGCTCACATACTGGGGAAAGACCCTATAAATGCACGCATTGTGACAAGGCCTTTTCAAATTCATCTCATTTAAAAAGACATATTTTCACGCATTTTGAAGATAGACCACACAGATGCGGGTACTGTGGTAGAGCCTTTTCAgatttatcaaatttaaaaggacatattcgcacgcatactATGGAGAAGCCCCATAAATGCACGCATTGCGAGaaagatttttcaaaattgtgtCATTTAAAAATCCATATTCGTACTCATACCGGGGAAAGACCCTATAAATGCACGCAGTGTGAGAAATCCTTTTCTGATCCTTCAGGTTTAAGAATACATAGTCGCACACATACTGGGGAGAGACCCTATAAATGCACGCACTGTGAAAAATCATTTGCAGGAGGTTCAAACTTAAAAAGGCATATTTCATCACACACAAGCAATTAA
Protein Sequence: MEGLSIKIKEEIEIQEDHLEWIKPEPSGEGFKMKKAVDIKIEEEIKIQEDQMKIGIKQEHIGEGFETEIEETFCNNGDKGDFNFNDNKIFSKEDIFILNEEHIKKEIVGQEHSDNEDIRKGKEQVLDKLVEENVEKHLRSSPNENFCCSLCCMKSFSTKTGLKRHIRSYHTGERSYKCKYCEKTFSQSSHLAAHIDFNHTAKRPHKCTNCEKAFFRLSHLKTHSRTHTGERPFKCKYCEKTFLQSSHLKSHINSGHTGKKNHKCTHCEKDFFELSLLKRHIRIHTGERPHKCKYCEKTFSQSSHLASHVDFNHTAKRPHKCTNCEKAFFRLSDLKTHSRTHTGERPFKCKYCEKTYLQSSHLKTHVNFLHTAERPHKCKNCEKAFFRLSDLKTHSRTHTGERPFKCKYCEKTYLQSSHLKTHINSGHTGKKTHKCTHCEKAFFELSLLKRHIRIHTGKNTYKCKYCEKTFSQSTNLKRHICSHTGERPYKCTHCDKAFSNSSHLKRHIFTHFEDRPHRCGYCGRAFSDLSNLKGHIRTHTMEKPHKCTHCEKDFSKLCHLKIHIRTHTGERPYKCTQCEKSFSDPSGLRIHSRTHTGERPYKCTHCEKSFAGGSNLKRHISSHTSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00244500;
90% Identity: iTF_00244500;
80% Identity: iTF_00244500;