Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294046.1:4136438-4138033[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.014 14 6.7 5.4 12 41 77 103 71 112 0.86

2 16 0.0018 1.8 9.6 6.9 6 41 100 132 99 135 0.82

3 16 0.23 2.3e+02 2.8 3.6 18 37 139 159 132 164 0.77

4 16 0.79 8.1e+02 1.1 2.8 19 35 168 186 156 188 0.78

5 16 0.3 3.1e+02 2.4 3.9 12 40 192 217 180 220 0.73

6 16 6 6.2e+03 -1.7 0.2 18 29 226 237 223 243 0.79

7 16 0.0053 5.4 8.0 1.3 10 29 247 265 233 279 0.75

8 16 0.34 3.5e+02 2.2 4.0 17 41 281 302 268 305 0.83

9 16 0.00033 0.34 11.9 1.1 6 38 299 327 298 331 0.85

10 16 0.0065 6.7 7.8 3.0 14 38 333 354 326 365 0.76

11 16 0.0039 4 8.5 3.2 18 41 365 385 353 387 0.88

12 16 0.046 47 5.0 0.6 16 39 391 411 386 414 0.76

13 16 0.09 92 4.1 0.6 13 29 416 432 409 446 0.76

14 16 0.008 8.2 7.5 1.2 16 39 447 467 437 470 0.80

15 16 0.014 15 6.6 1.2 5 29 465 488 463 494 0.87

16 16 1e-05 0.01 16.8 1.6 10 44 498 528 488 528 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.014	14	6.7	5.4	12	41	77	103	71	112	0.86
2	16	0.0018	1.8	9.6	6.9	6	41	100	132	99	135	0.82
3	16	0.23	2.3e+02	2.8	3.6	18	37	139	159	132	164	0.77
4	16	0.79	8.1e+02	1.1	2.8	19	35	168	186	156	188	0.78
5	16	0.3	3.1e+02	2.4	3.9	12	40	192	217	180	220	0.73
6	16	6	6.2e+03	-1.7	0.2	18	29	226	237	223	243	0.79
7	16	0.0053	5.4	8.0	1.3	10	29	247	265	233	279	0.75
8	16	0.34	3.5e+02	2.2	4.0	17	41	281	302	268	305	0.83
9	16	0.00033	0.34	11.9	1.1	6	38	299	327	298	331	0.85
10	16	0.0065	6.7	7.8	3.0	14	38	333	354	326	365	0.76
11	16	0.0039	4	8.5	3.2	18	41	365	385	353	387	0.88
12	16	0.046	47	5.0	0.6	16	39	391	411	386	414	0.76
13	16	0.09	92	4.1	0.6	13	29	416	432	409	446	0.76
14	16	0.008	8.2	7.5	1.2	16	39	447	467	437	470	0.80
15	16	0.014	15	6.6	1.2	5	29	465	488	463	494	0.87
16	16	1e-05	0.01	16.8	1.6	10	44	498	528	488	528	0.80

Sequence Information

Coding Sequence: ATGGAAGATGTGAAAATTGAAATAGAGGAACACGAAATCAAATATTCTGAAGAGCTTGAAAACAAAGTTAAGAGTAGCCTGAAATACGTAAAAGAAGAAATTTTGGATGAAATAGAAATTGAAAATGAACATCTCGATATCCCCTCATCAGAAAAAAAGAAGCATACTAAAATTAAGAAGATTACAGGAGATATAACAGATTTTAATGGCAACATTTTAAAAGAACGCATAgacgataaaaaatatatttgttccTATTGTTTGAAGAAGTTTAACCATAAAGGTTGCTTATCAAATCATAtcaaaacacacataaaaatcgAGAAACCGCATAATTGTCCTCATTGCGTGAAAAAATTTCACTCTACAAGTAATTTAAAGAACCATTTGAAAAAGCATTCGAAAAAGCCAGATGTATGTTCCTATTGTCAAAAGGAGTTTTGTTCTAAACAAGCTTTAACCAGTCATATTCGGACACATACTCTGGAAAAACCATTCGGTTGTAAAAATTGTGGAAAATTGTTTTCCAGAAAAGACTATTTGAAAAGCCATAGCTTAACTCACGAGGGAGAAAGGAGAGTTAAGGCTCACAAATGTCCGAAATGCAAGaaaaagttttctaaaaaatcttatttaactatacatattCAAAGACACAGTGGggtaaaaccttttaaatgttCTCAATGTCAAAAGAAGTTTTTCATCAAAAGTGAGTTGGCTCAGCATAACAGAATACACACTGGACAAACTTTATATGAATGTGCCTATTgtcagaaaataattaaatataaatgggTATTAATTGAGCATATACGGATTCATACGGGTTTAAAACCTTATAAATGTACACATTGTTTGAAAGAATTCAGATTAAAAAACACCTTAACTCAACATATTCGATCGCATACCAAAGAAAAACCTTACGAGTGTCCATACTGCCAGAAAAGGTTTTCAAGAAGTAGCAATCTGAACCAACATAAGAAAATTCATGGAGAAAAATcgaatatttgtatttattgtaACAAACAGTTTGCACTGTCAAGAGCTTTAGCCAGGCATGTTCAAATACACTTGAGAGTTGTATCTCACCATTGTTCGTATTGTCACAAGAAGTTTGTTTCTGCAAGTAATTTACTTGAGCATATAAAAACCCATACAGGGGATGCAAAATATAAATGTCCATACTGCCAACAACAGTATAATGAAAAGAGAAGACTCGTCGTTCATATTCGGACTCATACCAAAGAGCTACCATTTGAATGCTCCATATGCGACAGAAAATTTTCTTACAAGCCCTACTTGAATCAGCATTTGAAGTTACATTCTGGAGTCAAGAGTTTTATCTGCACTTTTTGCGAGAAACGGTTTTCAAGATCGGAACATTTAAGATCGCACGTTCGAATCCACACAAAGGAAAAGCCATTTGGTTGTACTTTTTGTGGAAAAAAGTTCGCGAATAAGGAATATGTAAAAATTCATATTCGAACTCACACAGCTGAGAAACCATTTAAATGTAGTTTTTGTGAGAAGCAGTTCAGTCAAAGTACTCCCTTAAGTCAACATATAAGGAAGGTTCATAAGAACTCCGTTTGA
Protein Sequence: MEDVKIEIEEHEIKYSEELENKVKSSLKYVKEEILDEIEIENEHLDIPSSEKKKHTKIKKITGDITDFNGNILKERIDDKKYICSYCLKKFNHKGCLSNHIKTHIKIEKPHNCPHCVKKFHSTSNLKNHLKKHSKKPDVCSYCQKEFCSKQALTSHIRTHTLEKPFGCKNCGKLFSRKDYLKSHSLTHEGERRVKAHKCPKCKKKFSKKSYLTIHIQRHSGVKPFKCSQCQKKFFIKSELAQHNRIHTGQTLYECAYCQKIIKYKWVLIEHIRIHTGLKPYKCTHCLKEFRLKNTLTQHIRSHTKEKPYECPYCQKRFSRSSNLNQHKKIHGEKSNICIYCNKQFALSRALARHVQIHLRVVSHHCSYCHKKFVSASNLLEHIKTHTGDAKYKCPYCQQQYNEKRRLVVHIRTHTKELPFECSICDRKFSYKPYLNQHLKLHSGVKSFICTFCEKRFSRSEHLRSHVRIHTKEKPFGCTFCGKKFANKEYVKIHIRTHTAEKPFKCSFCEKQFSQSTPLSQHIRKVHKNSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00244516;
90% Identity: iTF_00244516;
80% Identity: iTF_00244516;