Basic Information

Insect: Brachyptera risi
Gene Symbol: -
Assembly: GCA_964007535.1
Location: OZ023331.1:8839528-8866139[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.18 16 7.3 0.3 2 23 180 202 179 202 0.94

2 20 2 1.7e+02 4.0 1.3 1 21 205 225 205 228 0.77

3 20 0.3 27 6.6 0.4 3 23 256 277 255 277 0.96

4 20 4.3 3.8e+02 2.9 0.3 1 12 306 317 306 319 0.82

5 20 0.013 1.1 10.9 0.7 3 23 420 441 418 441 0.91

6 20 1.3 1.2e+02 4.5 2.5 1 23 444 471 444 471 0.84

7 20 8.2 7.3e+02 2.1 0.4 1 16 524 539 524 549 0.85

8 20 0.39 34 6.2 1.3 1 23 1045 1068 1045 1068 0.94

9 20 0.0066 0.59 11.8 1.0 1 23 1076 1099 1076 1099 0.98

10 20 0.0076 0.67 11.6 3.7 1 23 1139 1162 1139 1162 0.96

11 20 0.011 0.97 11.1 2.9 1 23 1199 1222 1199 1222 0.95

12 20 0.0025 0.22 13.1 1.3 1 23 1228 1250 1228 1250 0.95

13 20 8.9e-06 0.00079 20.8 1.0 2 23 1257 1278 1256 1278 0.97

14 20 1.5e-07 1.3e-05 26.4 2.5 1 23 1283 1305 1283 1305 0.98

15 20 0.00034 0.03 15.9 4.4 1 23 1311 1333 1311 1333 0.99

16 20 3.5e-05 0.0031 19.0 4.8 2 23 1340 1361 1339 1361 0.96

17 20 6.5e-05 0.0057 18.1 0.5 3 23 1369 1389 1367 1389 0.96

18 20 0.00063 0.056 15.0 0.1 3 23 1397 1418 1396 1418 0.95

19 20 1.7e-05 0.0015 19.9 1.4 1 23 1424 1446 1424 1446 0.98

20 20 0.0015 0.13 13.9 0.8 2 23 1453 1475 1452 1475 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.18	16	7.3	0.3	2	23	180	202	179	202	0.94
2	20	2	1.7e+02	4.0	1.3	1	21	205	225	205	228	0.77
3	20	0.3	27	6.6	0.4	3	23	256	277	255	277	0.96
4	20	4.3	3.8e+02	2.9	0.3	1	12	306	317	306	319	0.82
5	20	0.013	1.1	10.9	0.7	3	23	420	441	418	441	0.91
6	20	1.3	1.2e+02	4.5	2.5	1	23	444	471	444	471	0.84
7	20	8.2	7.3e+02	2.1	0.4	1	16	524	539	524	549	0.85
8	20	0.39	34	6.2	1.3	1	23	1045	1068	1045	1068	0.94
9	20	0.0066	0.59	11.8	1.0	1	23	1076	1099	1076	1099	0.98
10	20	0.0076	0.67	11.6	3.7	1	23	1139	1162	1139	1162	0.96
11	20	0.011	0.97	11.1	2.9	1	23	1199	1222	1199	1222	0.95
12	20	0.0025	0.22	13.1	1.3	1	23	1228	1250	1228	1250	0.95
13	20	8.9e-06	0.00079	20.8	1.0	2	23	1257	1278	1256	1278	0.97
14	20	1.5e-07	1.3e-05	26.4	2.5	1	23	1283	1305	1283	1305	0.98
15	20	0.00034	0.03	15.9	4.4	1	23	1311	1333	1311	1333	0.99
16	20	3.5e-05	0.0031	19.0	4.8	2	23	1340	1361	1339	1361	0.96
17	20	6.5e-05	0.0057	18.1	0.5	3	23	1369	1389	1367	1389	0.96
18	20	0.00063	0.056	15.0	0.1	3	23	1397	1418	1396	1418	0.95
19	20	1.7e-05	0.0015	19.9	1.4	1	23	1424	1446	1424	1446	0.98
20	20	0.0015	0.13	13.9	0.8	2	23	1453	1475	1452	1475	0.94

Sequence Information

Coding Sequence: ATGAGCCAGAATAACGGGTTAGAAGAATTTGTTGGTCGGACAAGTTATGACCTTTACCACCCAAAGAAAAGCAAGGTTACAGAACCAGACACGACTGCAAATGATAGAAATTCGAGAGATGGGAAGACCCATTACAGCGATGGATCGGATAATGAAGAAAGCTTAcagaaaatattggaaaatgctgaggaggaagaagaaagagaaatgTTTAATTCCAAACTGACTTCCAACAATCAATCAAATACTATTGTTAGTATGAACTTCGAAATTCCACAATTATCTGCCTTTTTACAACCTCAATTACAAGCAATCCCAGTTCCGGCGTCCATCATGATACCTTATACATCACGATCCACTGAGGCAAAGTTATTTGCAGTGCAACAAGCTCGAATTTTGAATTCATCTGATCCTGCAGTTTCACGGATCAATCTTGAGCCCACTGTAGGAACCATTATCGAATCATCTTCACAAATTTCCTTACAAGCCTCAAAAATCCGAGTAAAATCAAAGGAGGAATCGGGGACGAAACCGTTGAAGTGCTCTGTTTGCCAAGAGtggtttttttcaaatgataaatTGACCATTCACCTAATTTCAAATCATGGAAAACACCACTGCAGTTACTGCGACGAAATGTTCGAAACTGATTCCGTGAGAGAAGACCACGAAAAGGACATTCATTTTCCTTTAGAATGCGATATTTGTAGTGCTTCTGTTGATAATTTGGATGAACATTATGAGGAAACACATGATATGAGAAATTGTAGATATTGTGGTGTTTTAGTAAAACCAAAGTCATATTACCAAGTCCACGTACGAAGAAAGCACTTTGTAAACTGTTTGGAAGCATTAGAGGAGAGAGACGTTCGACTGGTAGGTAATTGGTCACAAAGTTCTGACCCGACATGGAATTTCAACTGCCACTTATGCGGCAAAGAGCGAAAGCGTGCAGACATTCTCGGACATTTCTTTTCGTACCACCGTTTGAGTCTCATGTGTTTAATAGTTTTTCTACGTACTGAACAGATGTTGTTCAGCGTGCAAGGTTCTTTGGCTCCATCTGGTGTTCATAATTTGTATACACAAGATACATCAACAGACGATTCTTCCAAAACGTCTCAACAATCAGAGATCTCAACAAGTACAACGTCTGACGACATTCAAAATCGCTTCGATTGCACCTCATGTACAAAACCATTCACTTTCCAAGTGCCAAAACCCGCCCACGATATCGTCTGTTGCGGCCTCACTATTTGTCGTTATTGTAGTAAAACGTTTACCGACAAAGATATGAGAAACCTCCATTTGGAAGAAGAGCACGTCAGCTTCCCGTGTTCTCGAGGTTGCGACAAAACTACGAATACGTTCACCCGGGATTCCGAGCTGCAAAAACATTATAACGAGACCCACTCGGAGATGACTTGCCATTTTTGTGAAGACTTTCTTCCCAACAACTTGTTGAATCTGGCTGAACATCTGCAATCGAAACATGCTGCTTCGAGTCGAAGCAAGGCACTGAAAGGCAAAGATATTGAACTGTTGAAGTTGAATCCAAAGACTGGCTTTTACGTGTGTTCCTTGTGTAATGCTGTAACATCAACCATGACCAACTTGGATGCCGTGTGTAAGCATCTCCAGTATCATAACATCTCCTTGATAGCTGTTCTTGATACACTCGAGTCGCATCAGAATACCGCCAGTAATGCACCAAGAGGGCAAGCAAACGCGTCGTTACATGGAGTACCTAAGAGCGAAAATGAGAgtggtgagaaaaaaaacaagaaacgtGCGATGAAAAAAGATAAGATCCCCAAGAAGCTTTCCCGTGTCGCTGGAGCTAAAAAATCTAAAGCAAACCCTAATCGTCACATGTCTGTGGAAAATTCAGTTGAAGAAAATGGGTGTGAAGAAAGAGAAACGGTTATTAAAGTTTGCTTGAAAAAAGAAACCAAAAGAAATCTTGATGATACGGGTGACTTGGAGTCCAGTCTTGAGATCTGCGATGCTAATGATAATACTGATGTGGCGGAAGATTTGACGCTTCGTCCGAACTCGTCGTGTGATTCCAccacggaagaagaagaagaaggattTGGGTCGGATGTCGTAGGCAACTCTTCAGACGAAGATGAAGAGACCTTGAGGGATGCTTTGGAGAAAATGTCGAAGGGTGACATAATTATTGAAAACGATTTGGGCGAGGCCGAAATTGATCCCACTGAAATAGAATGCGTCATCGACGATACATCCGATGACGAAGAATACAACACCGAGGACAATAATTCCGATCTACAGTTTGAAGTGAAGCGAGAACAGTTTGAAATTAACGAAAACCTGAATTCCAATTTGTCAGATATTCAAGAAATGGACTGCGAAAATGATGTAGATAACTTGGATCAAAATTACCGAGAAACTGTTCTTAAATGCTGTGCCGATAAGAATGTGGCGGACAAAGCATTAGACATGATAGAACGTACAATGGAAGATATGTTTCATGATGCTCCGAAACAATCTCTCGAGTGGAATAACCACCGCGAAGACGCCGACGAAGGAATCAACGACGGTAACATTATTGAAACTGATCCGAGTAGTTCCATCGAAGAGGGATCAGATTCAAAAGAAAACTCGAATGCCTTGAACAACCATAATAACCACAAACCCAATAACAAAAGTATACCTCAAACTGATGAAGTCAATAAAATTTCTAATAAAACAAATATGCGGCCAAAGGCTAAAAATGATGTCAATAGTTTCGAAGGTAGACTGAAGAACATCAAGCCTGATCCCGAACAGAATAAAACGGCCGAACAGGTTTTCAACTCTATACTCAAATGCGAACTTTGTACAAAAGTAATATGCGTATTAAAGTCGCCCGTCGAATATGTCGAGCATATGAAAATGTATCACAAGTTTGCCATTTCGGCTCACTGCTCCAAAATCGACGACGCTTCCAATAGTGGTTCTTCCGACGAGCTGGAAAACGTACATCCGGTCAACAACGCTTCCGAGAAGGTGTTCCAGTGCCCGTTTTGTGCCATACGATCTGTCTGGAAGACGGCCATACGCCAGCACGTGTTCGAGACCCACTTGGCCGACTGTACCGCTGAGCAGCCATCGGACAGTCTCGGCTACCGTTGTCGGTACTGCAACGAGTCCTTCTGGCGAGTCACCGAGCGGAACGAGCATCAGATTACCAAACACGACGACCAGATCTTCGAGTACTACAAATGCTACATCTGTTCGCAGATTTCTTCGAGCAAGCTGATGCTGACCCGCCACCTGAAGGTGTCTCACCCTGCCGAGCCTCAGTACAACGCCATCTCGTACAAGTGCAAGCTGTGCCTGCTGACGTACCCGTGCCTGAGACTGCTGCGCGATCACTTCACCGCCACGCACCCGGCCGCCATGGTCTTTCCCTGCCAGCACTGCAGCATCACGCTCAAGAACAAGAAGACTCTCAAAACGCACCTCAAGAACATGCACGCAGTGGGGCGACGCATGGACTGCACGCTGTGCGGTAAGATCCTGTTCAGCAAGCGCGCGCACGCCATCCACTACCGCATGAAGCACAGCCAGGCGTCCAAGGTCGGCTTCCGCTGTCGCATCTGTCACCGGCGGTTCGACACCAAGGACGACCGCAAGATGCACTACGCGGTGGACCATCTGGGGGAGTCCCCGTACCATTGCACGGAGTGTGGGAAGGGGTTTGCGTCCAAGTCGGGCATGTACGGGCACAAGCAGCTGCACACGGGCTCTGGCATCTCCAAGTGCCAGTACTGTGGCAAGGAGTTTACGCGCAAGGACAGCTACAATGAGCACCTGTTGATCCACAACGGGCCGCGACACAAGTGTCCGCACTGCCCGAAAGAGTTCGTCCAGAGGTCAAACCTTGTCCGACACATCAGGATACATACAGGCGAGAAGCCGTACAAGTGCGTGTACTGCGACAAGTGCTTCTCGGACAAGGGGGCGTGCAACTCCCACATTCGCGTCCACACGCGCGAGGAGACATGCAGCTGTCCGTACTGCGGCCAGACCTTCTCCAAGAAACAGAAACTGAAATATCACATACGAAAACACACGGGCGAGGGTTTGATCAACTGCGAAATCTGCACCAAGTCATTCACGAACAGCTTTGCGCTGAAGGAGCACCGCCTGATCCACAACCGCGAGACGTCCATCTTGTGCGGCGTGTGCGGCAAGGGGTTCAACAGCGAGAAGTACTTGCAGCGCCACGTCGCCATCGTGCACGAGCCTCAGCAGACGTTCAACTGCCCGCTCTGCTCGAAGGTGTTCTCGCAGCAGACGCGGCTCAAGAGCCACCTGATGACGCACACGGGCGTGAAGCACATGAAGTGCCTGCTCTGCGACAAGGCCTACTCGGTGCGCAAGTCCCTCCGGCGCCACCTGCTCGAGAAGCACCAGGTCTCTCCCGATCACCCGCAGTACAAGCGCTGCTTCTACGCCATGACGCACCAGGAGGCCGGCCTGCAGATCCCCGACGACATGTCCTACTTCGCGGCTGCCTACGACGACGACTCCACCACTCACTCCGTGCCCCGAGACGAGGAGATCAAGCTCCAGGGGAAGAGGTCGCCAAGAAAGTCAGGGAAGAAACCGGTCTACATCGATCCTGACGAGAAGGTGGTCGCAAAGAAACCGCGGAGGAAGACGCCGACGAAGAAAGCGGCCGCAGGGAAGAACGATTCGGCGTCTCATCAAGATAAACCGTCGACTTCCAAACAAGATAAGAAAGGTACGAAGACATCAACAAAGAAACTGTCGGCGGAGAAGGCCGCAGGTAGTTTCGACGATTCCAGTTCGGGCTGCTCGGACGATTCCGAATCGACGGAAGACGGTGCGAAGATGAAAAGGGGTATCTCGAATATAGTGGAGCGTCTGCAGAAGAGGCTGGGACCGGGGAAGAAGAAGCGGAGGGTGGAGGCCATCGTGGAGACGCTGCAGAAGAGCTCCACGGGGTCTCCGAGCACAAACCAGGAGGACAGCAACGCGGAGCCAAGCGACAACGACGAGCCGGTGCTGGCCCGGATCCACTCGTTGAACAGTCCGAAGCGGGCCAGTGTCGGGCGGAGGAACTTGTGCCGCAAGCCGGTCCCGGAGAGGATCCCGAGGAAGGATAGGTCTGACGACGAGTCAAGCTGA
Protein Sequence: MSQNNGLEEFVGRTSYDLYHPKKSKVTEPDTTANDRNSRDGKTHYSDGSDNEESLQKILENAEEEEEREMFNSKLTSNNQSNTIVSMNFEIPQLSAFLQPQLQAIPVPASIMIPYTSRSTEAKLFAVQQARILNSSDPAVSRINLEPTVGTIIESSSQISLQASKIRVKSKEESGTKPLKCSVCQEWFFSNDKLTIHLISNHGKHHCSYCDEMFETDSVREDHEKDIHFPLECDICSASVDNLDEHYEETHDMRNCRYCGVLVKPKSYYQVHVRRKHFVNCLEALEERDVRLVGNWSQSSDPTWNFNCHLCGKERKRADILGHFFSYHRLSLMCLIVFLRTEQMLFSVQGSLAPSGVHNLYTQDTSTDDSSKTSQQSEISTSTTSDDIQNRFDCTSCTKPFTFQVPKPAHDIVCCGLTICRYCSKTFTDKDMRNLHLEEEHVSFPCSRGCDKTTNTFTRDSELQKHYNETHSEMTCHFCEDFLPNNLLNLAEHLQSKHAASSRSKALKGKDIELLKLNPKTGFYVCSLCNAVTSTMTNLDAVCKHLQYHNISLIAVLDTLESHQNTASNAPRGQANASLHGVPKSENESGEKKNKKRAMKKDKIPKKLSRVAGAKKSKANPNRHMSVENSVEENGCEERETVIKVCLKKETKRNLDDTGDLESSLEICDANDNTDVAEDLTLRPNSSCDSTTEEEEEGFGSDVVGNSSDEDEETLRDALEKMSKGDIIIENDLGEAEIDPTEIECVIDDTSDDEEYNTEDNNSDLQFEVKREQFEINENLNSNLSDIQEMDCENDVDNLDQNYRETVLKCCADKNVADKALDMIERTMEDMFHDAPKQSLEWNNHREDADEGINDGNIIETDPSSSIEEGSDSKENSNALNNHNNHKPNNKSIPQTDEVNKISNKTNMRPKAKNDVNSFEGRLKNIKPDPEQNKTAEQVFNSILKCELCTKVICVLKSPVEYVEHMKMYHKFAISAHCSKIDDASNSGSSDELENVHPVNNASEKVFQCPFCAIRSVWKTAIRQHVFETHLADCTAEQPSDSLGYRCRYCNESFWRVTERNEHQITKHDDQIFEYYKCYICSQISSSKLMLTRHLKVSHPAEPQYNAISYKCKLCLLTYPCLRLLRDHFTATHPAAMVFPCQHCSITLKNKKTLKTHLKNMHAVGRRMDCTLCGKILFSKRAHAIHYRMKHSQASKVGFRCRICHRRFDTKDDRKMHYAVDHLGESPYHCTECGKGFASKSGMYGHKQLHTGSGISKCQYCGKEFTRKDSYNEHLLIHNGPRHKCPHCPKEFVQRSNLVRHIRIHTGEKPYKCVYCDKCFSDKGACNSHIRVHTREETCSCPYCGQTFSKKQKLKYHIRKHTGEGLINCEICTKSFTNSFALKEHRLIHNRETSILCGVCGKGFNSEKYLQRHVAIVHEPQQTFNCPLCSKVFSQQTRLKSHLMTHTGVKHMKCLLCDKAYSVRKSLRRHLLEKHQVSPDHPQYKRCFYAMTHQEAGLQIPDDMSYFAAAYDDDSTTHSVPRDEEIKLQGKRSPRKSGKKPVYIDPDEKVVAKKPRRKTPTKKAAAGKNDSASHQDKPSTSKQDKKGTKTSTKKLSAEKAAGSFDDSSSGCSDDSESTEDGAKMKRGISNIVERLQKRLGPGKKKRRVEAIVETLQKSSTGSPSTNQEDSNAEPSDNDEPVLARIHSLNSPKRASVGRRNLCRKPVPERIPRKDRSDDESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00242520;
90% Identity: iTF_00242520;
80% Identity: -