Bris028130.1
Basic Information
- Insect
- Brachyptera risi
- Gene Symbol
- -
- Assembly
- GCA_964007535.1
- Location
- OZ023335.1:4963825-4966779[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 5 2e+03 0.0 0.0 23 38 69 84 65 87 0.87 2 10 0.49 2e+02 3.3 0.0 11 38 292 318 286 321 0.84 3 10 0.39 1.6e+02 3.6 0.0 11 38 350 376 342 379 0.84 4 10 0.39 1.6e+02 3.6 0.0 11 38 452 478 444 481 0.84 5 10 3.3 1.3e+03 0.6 0.0 11 38 510 536 505 537 0.85 6 10 0.012 4.7 8.5 0.0 9 38 596 624 590 627 0.86 7 10 0.026 11 7.4 0.0 11 38 642 668 636 671 0.84 8 10 0.51 2.1e+02 3.2 0.0 10 38 729 756 722 757 0.88 9 10 2.9 1.2e+03 0.8 0.0 21 38 900 917 887 918 0.81 10 10 9.1 3.7e+03 -0.8 0.0 17 36 941 959 932 960 0.80
Sequence Information
- Coding Sequence
- atggtctctccgctatctcgcccgtcttctccggggaCATCGGATCGGTCTCACCGCTATTTTgcccgtcttctccggggacatcggattggtctctccgctatcttGCCCGTCTTCTCCGGGAACATCGGActggtctctccgctatctcgaCCGTCTTCTCCGGGGACGTCGGATTGGTCTCCCCGCTATatcgcccgtcttctccggggacatcggattggtctctccgctatctcgcccgtctttTCCGGGcacatcggattggtctctccgctaATTCGCCCGTCTCCTTCGGggacatcggattggtctctccgatatctcgcccgtcttctccgggaacatcggattggtctctccgtTATCTCGCACGTCTCCTTCGGggacatcggattggtctctccgctatctcgcccgtcttctccggggaCATCGAATTGGTCTCTCCGTTATCTCGCCCGTCTTTTCCGGGGACATCGATTagtctctccgctatctcgcccgtcttctccggggacatcggattggtctctccgctatctcgcccaTCTTCTCCGGggacatcggattggtctctccgctatctcgcccgaCTTATCCGGGCACATCGGATTTGTttctccgctatctcgcccgtcttctccgggcACATCGGATTGGTATCTCCGTTATCTCGCCCGTCCTCTCTGggacatcggattggtctctccgctatcgCGCCCGACTTCTCCGGGCACATCGGATTTGTttctccgctatctcgcccgtcttctccgggaACATCGGATTAGTCTCTTCgttatctcgcccgtcttcttCGGGGACATAggattggtctctccgctatctcgcccaTCTTCTCCGGggacatcggattggtctctccgctatctcgctCGACTTCTCCGGGCACATCGGATTTGTttctccgctatctcgcccgtcttctccgggaACATCGGATTAgtctccgctatctcgcccgtcttctccggggacatcggattggtctctccgctatctcgctcatcttctccggggacatcggattggtctctccgctatctcgcccgaCTTCTCCGGGCACATCGGATTTGTttctccgctatctcgcccgtcttctccgggacatcggattggtctctccgtTATCTCGCCCGACTTCTCCGggacatcggattggtctctccgctatctcgcccgaCTTCTCCGGGCACATCGGATTTGTttctccgctatctcgcccgtcttctccgggaACATCGGATTAGTCTCTCcgttatctcgctcatcttctccggggacatcggattggtctctccgctatctcgctcatcttctccggggacatcggattggtctctccgctatctcgcccgaCTTCTCCGGGCACATCGGATTTGTttctccgctatctcgcccgtcttctccgggacatcggattggtctctccgttatctcgcccgtcttctctgggacatcggattggtctctccgctatctcgcccgaCTTCTCCGGGCACATCGGATTTGTttctccgctatctcgcccgtcttctccgggaACATCGGATTAGTCTCTCCgttatctcgcccgtcttctccggggacatcggattggtctccCCGCTAcctcgcccgtcttctccgggcacatcggattggtctctccgctatctcgcccgtcttctccgggaACATCAgattggtctctccgctatctcgcccgtcttctccggggacatcggattggtctctccgctatcttGCCCGTCTTCACCGAAgacatcggattggtctctccgctatctcgcccgtcttctccgggcACATCGGATTtgtctctccgctatctcgcccgtaTTCTCCGGGCACATCGGATTtgtctctccgctatctcgcccgttTTCTCCGGGcacatcggattggtctctccgctatctcgcccgtcttctccgggcACATCGGATTtgtctctccgctatctcgcccgtaTTCTCCGGGCACATCGGATTtgtctctccgctatctcgcccgtaTTCTCCGGGCACATCGGAATtgtctctccgctatctcgcccgtaTTCTCCGGGCACATCGGATTAGTCTCTCCGTTATCTCGCCCGTCTCCTTCGGGGACATCGGATCAGTCTCTCCGTTATCTCGCCATTCTCCTTCTGGGACATCGGATTGTTCTCTCTGTTATCTCGCCCGTCTCCTTCGAggacatcggattggtctctccgctatctcgcccgtcttctccggggaCATTGGATTGGTCTCTCCactatctcgcccgtcttctccggggacattggattggtctctccgctatctcgcccgtcttctccgaGGACATtggattggtctctccgctatctcgaCCGTCTTCTCCGGGGACATCAGATTAGTCTCTCCGTTATCTCGCCCGTCTCCTTCGGggacatcggattggtctctccgctatctcgcccgtcttctccggggacattggattggtctctccgctatctcgcccgcCTACTCCGGGGACATCGGATTAGTCTCTCCGTTATCTCGCCCGTCCCTCCGGGCACATCGGATTAGTCTCTCCGTTATCTCGCCCGTCTCCTTCGGggacatcggattggtctctccgctatctcgcccgtcttctccggggacattggattggtctctccgctatctcgcccgtcttctccggggacatcggattggtctctccgctatctcgcccgtcttctccggggacatcggattggtctctccgctatctcgcccgtcttctccggggacattggattggtctctccgctatctcgcccgtcttgTCCGGGCCCATCAGATTtgtctctccgctatctcgcccgtctcCTTCGGGGACATCGGATTGGTCactccgctatctcgcccgtcttctccggggacatcggattggtctctccgtTAA
- Protein Sequence
- MVSPLSRPSSPGTSDRSHRYFARLLRGHRIGLSAILPVFSGNIGLVSPLSRPSSPGTSDWSPRYIARLLRGHRIGLSAISPVFSGHIGLVSPLIRPSPSGTSDWSLRYLARLLREHRIGLSVISHVSFGDIGLVSPLSRPSSPGTSNWSLRYLARLFRGHRLVSPLSRPSSPGTSDWSLRYLAHLLRGHRIGLSAISPDLSGHIGFVSPLSRPSSPGTSDWYLRYLARPLWDIGLVSPLSRPTSPGTSDLFLRYLARLLREHRISLFVISPVFFGDIGLVSPLSRPSSPGTSDWSLRYLARLLRAHRICFSAISPVFSGNIGLVSAISPVFSGDIGLVSPLSRSSSPGTSDWSLRYLARLLRAHRICFSAISPVFSGTSDWSLRYLARLLRDIGLVSPLSRPTSPGTSDLFLRYLARLLREHRISLSVISLIFSGDIGLVSPLSRSSSPGTSDWSLRYLARLLRAHRICFSAISPVFSGTSDWSLRYLARLLWDIGLVSPLSRPTSPGTSDLFLRYLARLLREHRISLSVISPVFSGDIGLVSPLPRPSSPGTSDWSLRYLARLLREHQIGLSAISPVFSGDIGLVSPLSCPSSPKTSDWSLRYLARLLRAHRICLSAISPVFSGHIGFVSPLSRPFSPGTSDWSLRYLARLLRAHRICLSAISPVFSGHIGFVSPLSRPYSPGTSELSLRYLARILRAHRISLSVISPVSFGDIGSVSPLSRHSPSGTSDCSLCYLARLLRGHRIGLSAISPVFSGDIGLVSPLSRPSSPGTLDWSLRYLARLLRGHWIGLSAISTVFSGDIRLVSPLSRPSPSGTSDWSLRYLARLLRGHWIGLSAISPAYSGDIGLVSPLSRPSLRAHRISLSVISPVSFGDIGLVSPLSRPSSPGTLDWSLRYLARLLRGHRIGLSAISPVFSGDIGLVSPLSRPSSPGTLDWSLRYLARLVRAHQICLSAISPVSFGDIGLVTPLSRPSSPGTSDWSLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -