Bris014252.1
Basic Information
- Insect
- Brachyptera risi
- Gene Symbol
- Hr39_1
- Assembly
- GCA_964007535.1
- Location
- OZ023329.1:23731766-23743137[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.028 2.7e+02 1.8 3.6 115 170 93 150 12 196 0.66 2 4 2.1e-08 0.00021 22.0 0.0 1 24 358 381 358 406 0.84 3 4 0.007 69 3.8 0.0 77 121 410 452 378 481 0.69 4 4 3.2e-70 3.1e-66 225.6 0.1 157 408 418 681 406 681 0.88
Sequence Information
- Coding Sequence
- ATGACTCTGATTACAAGAGTGCCAACTGACCGAGAGGAAACATCGATGGAAGGAGTACAGATTTGTGGAGTCAACAACATTAACAACACAACGTTGTTGAACAATATCGAGGACAGCAAGCAACCACTCAAGTTCAGAGAAAATGTGGTCGACAAAGTACTGGACCACGTCCGCTCGAAACAGTTCCACCACCAAGCCCCTCTCCCCCCAAACGCCACCACCGAGCTACCCCTACTTGTCGACAAACTCCTCGGCAACGGCGGCTGTTACATCACCACCCCCTCCCATAGTCCCATTCTTCAGCACCGCCATCCCCTCCACCTGAAACACTCCGGCATCCCGCCCACCCCCAGCCCCGACTCGGCGATACACTCGGCGTACTCGTATTCGTCCCCAACCCAGTCGCCTGTCACGTCGCGACACGGCTCGATGACGGGCTTCAGCTCGCCGTACACGCCGTCGTTATCGCGGAACAACTCCGACGCGTCACAATATGGCGGCTCGCAGCACAGCAGCTGTTATAGCTACTCGTCGGTGTCTGTTTCGCCCACGCAGTTCTCGCCAACGCATTCGCCTATCCAGtcGCGCCATATCCATGGTGGATATCCTTCGCCTGTAATGCCGCGTGGATCTGACTGCTCTCCCCTCCACGTCATGGGTGCCAACGGTCACATGTACGGGGTACCTCGGGGACCTCTCGGGGCAGTCGATGAAGCCCTCCTGTTGGACGGGGCGTCCACGGACACGAACGATGAACGGGACGGTGGTGATGACAAGTTGTCATCCTTATCCGGAGATCTCGGTCAGCACTCGGCATTAGTAGCGCCTCCCGGTATCTCGAGGCAGCAACTTATCAACAGTCCGTGCCCAATCTGCGGTGACAAGATATCAGGCTTCCATTACGGTATCTTCTCTTGCGAGAGTTGTAAAGGTTTCTTCAAACGCACCGTACAGAATCGCAAGAACTATGTGTGTTTGCGGGGTTCCTCGTGTCCggtaaccatagcaactagaaagaAGTGTCCTGCGTGTCGGTTTGAGAAGTGCCTGAAAATGGGCATGAAACTAGAAGCCATTCGAGAAGATCGTACCCGCGGTGGTCGAAGTACGTACCAATGTTCGTACACGCTACCACCCAGCTTAGTTGCGCCGTCCGGTAGCGATCACATGAAGCTACTCGCCCCCTCTGGTGATCCCCAGGTGAAGCTGGAGGCACCAGATTTGGGGGCTATTGCGGGCAGCAGCGGAGAAAGCCAATCACCGCATTCGAGACACGCGGAGAAAACGGCGGTCCCTCAGTTATTACAAgaaATAATGGATGTGGAGCACCTATGGCACTACAACGAGTCGGAGGCACAGAAGATGTCGTCGGCGCACGGCAACAATCACCACGGCAACGGCAGCGGGCCGAGCAATGGCAATACGAGCAGCAGTCGAGTACCCAGCAATAACCCAGACTTCCTATCAAACTTGTGTAACATTGCTGACCATAGACTGTACAGGCTCGTCAAGTGGTGCAAGAGTTTGCCGCTCTTCAAGAATATATCGATCGACGATCAAATCTCCCTCCTGATCAATGCCTGGTGCGAGCTGCTGTTATTCTCGTGTTGTTTTCGCTCGATGTGTTCACCGGGTGAGATCCGAGTCAGCCTCGGCAAGTCCATCACTCTTGCTCAGGCCCGAGACTTGGGACTCGGTGCCTGCATCGAACGTATGCTCAACTTCACTGAGCACCTCAGGCGGCTCAGGGTGGACAAGTACGAGTATGTTGCCATGAAAGTCATTGTTCTTCTTACTTCAGATGCAAATGACTTACGAGAATGCGAGAAAGTGCGTGCATCCCAAGAGAAGGCGCTAGAAGCGCTGCAGCACTACACACTCGCACATTATCCAGATATCCCGTCCAAGTTCGGCGAATTGCTCTTGAGAATTCCAGAACTACAGCGCACGTGTCAGGTTGGTAAGGAGATGTTATCAATAAAGAACAAAGAAGGTGAAGGTCCTAGCTTCAATCTACTGATGGAGTTGCTACGAGGTGACCATTAA
- Protein Sequence
- MTLITRVPTDREETSMEGVQICGVNNINNTTLLNNIEDSKQPLKFRENVVDKVLDHVRSKQFHHQAPLPPNATTELPLLVDKLLGNGGCYITTPSHSPILQHRHPLHLKHSGIPPTPSPDSAIHSAYSYSSPTQSPVTSRHGSMTGFSSPYTPSLSRNNSDASQYGGSQHSSCYSYSSVSVSPTQFSPTHSPIQSRHIHGGYPSPVMPRGSDCSPLHVMGANGHMYGVPRGPLGAVDEALLLDGASTDTNDERDGGDDKLSSLSGDLGQHSALVAPPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSSCPVTIATRKKCPACRFEKCLKMGMKLEAIREDRTRGGRSTYQCSYTLPPSLVAPSGSDHMKLLAPSGDPQVKLEAPDLGAIAGSSGESQSPHSRHAEKTAVPQLLQEIMDVEHLWHYNESEAQKMSSAHGNNHHGNGSGPSNGNTSSSRVPSNNPDFLSNLCNIADHRLYRLVKWCKSLPLFKNISIDDQISLLINAWCELLLFSCCFRSMCSPGEIRVSLGKSITLAQARDLGLGACIERMLNFTEHLRRLRVDKYEYVAMKVIVLLTSDANDLRECEKVRASQEKALEALQHYTLAHYPDIPSKFGELLLRIPELQRTCQVGKEMLSIKNKEGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00243352;
- 90% Identity
- iTF_00243352;
- 80% Identity
- iTF_00243352;