Bris018250.1
Basic Information
- Insect
- Brachyptera risi
- Gene Symbol
- -
- Assembly
- GCA_964007535.1
- Location
- OZ023331.1:5628227-5636591[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.036 4.7e+02 1.3 0.0 179 198 22 42 13 49 0.85 2 4 0.0054 70 4.0 0.0 178 198 195 216 181 223 0.87 3 4 0.0055 71 4.0 0.0 178 198 275 296 262 303 0.87 4 4 0.00018 2.3 8.8 0.2 178 254 355 435 342 460 0.80
Sequence Information
- Coding Sequence
- ATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGAACATCAAGACGAGGCTTTATGACACGCTCGAGGCATGGCACGTGCACGTCGAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCAAGAGGAGGACATCAAGAGGAGGCTTGTgcgcaatacaagtgaacattgcggtgttgacgctgttgccaTATGACACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGGACATCAAGAGAAGGCTTGTgcgcaatacaagtgaacattgcGGTGTTGACGCTGTTGCCAtatgacgcgctcgaggcatggcacgtgcacgtcaaggatgtcaaaagagtgagacaggctgtgcagagaagcgagaggacgacatcaagaggaggcttgtgcgcaatacaagtgaacattgcGGTGTTGACGCTGTTGCCAGCATGGCACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGGACATCAAGAGGAGGCTTtatgacacgctcgaggcatggcacgtgcacgtcaaggatgtcaaaagagtgagacaggctgtgcagagaagcgagaggaggacatcaagaggaggcttgtgcgcaatacaagtgaacattgcGGTGTTGACGCTGTTGCCAGCATGGCACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGGACATCAAGAGGAGGCTTtatgacacgctcgaggcatggcacgtgcacgtcaaggatgtcaaaagagtgagacaggctgtgcagagaagcgagaggaggacatcaagaggaggcttgtgcgcaatacaagtgaacattgcGGTGTTGACGCTGTTGCCAGCTTGGCACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGGACATCAAGAGGAGGCTTTATGACACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGATATGACACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGGACATCAAGAGAAGGCTTGTgcgcaatacaagtgaacattgcggtgttgacgctgttgccaTATGACACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGACTTGGCACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGAACACCAAGAGGAGGCTTGTgcgcaatacaagtgaacattgcggtgttgacgctgttgccaTATGACACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTAAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGGACATCGAGAGGAGGCTTGTgcgcaatacaagtgaacattgcggtgttgacgctgttgtcaTATGACACGCTCGAGGCATGGCACGTGCACGTCAAGGATGTCAAAAGAGTGAGACAGGCTGTGCAGAGAAGCGAGAGGAGGACATCGAGAGGAGGCTTGTgcgcaatacaagtgaacattgcggtgttgacgctgttgccagtatga
- Protein Sequence
- MARARQGCQKSETGCAEKREENIKTRLYDTLEAWHVHVEDVKRVRQAVQRSKRRTSRGGLCAIQVNIAVLTLLPYDTLEAWHVHVKDVKRVRQAVQRSERRTSREGLCAIQVNIAVLTLLPYDALEAWHVHVKDVKRVRQAVQRSERTTSRGGLCAIQVNIAVLTLLPAWHARGMARARQGCQKSETGCAEKREEDIKRRLYDTLEAWHVHVKDVKRVRQAVQRSERRTSRGGLCAIQVNIAVLTLLPAWHARGMARARQGCQKSETGCAEKREEDIKRRLYDTLEAWHVHVKDVKRVRQAVQRSERRTSRGGLCAIQVNIAVLTLLPAWHARGMARARQGCQKSETGCAEKREEDIKRRLYDTLEAWHVHVKDVKRYDTLEAWHVHVKDVKRVRQAVQRSERRTSREGLCAIQVNIAVLTLLPYDTLEAWHVHVKDVKRLGTLEAWHVHVKDVKRVRQAVQRSERRTPRGGLCAIQVNIAVLTLLPYDTLEAWHVHVKDVKRVRQAVQRSERRTSRGGLCAIQVNIAVLTLLSYDTLEAWHVHVKDVKRVRQAVQRSERRTSRGGLCAIQVNIAVLTLLPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -