Bris003565.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachyptera risi
Gene Symbol
TFIP11
Assembly
GCA_964007535.1
Location
OZ023326.1:33585431-33604620[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-97 6.6e-93 312.4 21.8 1 275 416 685 416 685 0.98
2 2 0.031 4.1e+02 1.5 0.0 243 272 698 727 690 730 0.84

Sequence Information

Coding Sequence
ATGTCCGAGGAAGAGTtagaaaagtttgaagttacaGATTTCGATTTGGAAAATGAATTCAACATCAACAGACCGTCTCGTAGAGTTAGTAAAAATCAACAGATTTATGGAATTTGGGCAGATGACAGTGATGATGAAAACCCAGGCACAAGTAGACCCAGTTTTAAAACGTCTGCCAAAGGCAAGCACAACTACACAGCTCCAGTAAGCTTCATATCTGGCGGCTTACAAAATgccgagaaaaaaaaagaaattagtAGCTCTTCCACTAGCAAAGCCAATAAAGACGATGATAATGATGACGATGAAGAGGTGGAAATGGAAGGACGGGGTGGATTTGGAAACCGAAAGCAAAGAAGAGATATGAATAACTCTTCCAGtgaagaagatgaagaaattCGCCCTCAGAGTTCAAAGTTCCGTCAGCAATTTGACCAAGGCATTTCTATTGATGGCGATATTGCTGGTTTGCGAAAGAAACGTACTCCACTGAACCCGACTTTGATCCAAAAAGGTGTTGGCAACTGGGAAAGACATACAAAAGGAATTGGCGCCAAATTGTTGCTTCAGATGGGTTATCAGCCTGGTAAAGGGCTTGGTAAAGAGCTTCAAGGCATACAAGCACCTGTTGAAGCCAGACTCAGAAAAGGTCGAGGAGCTATTGGTGCATACGGTCCTGAAGTAAAGCAGAAGTTAGCCGATATTCATCATGAATCAGCTAAACAAGAAGAAACGAAAGAAGTTGAGGAGAAAGTCTCTTTGTGGAGAAGAGGTGATTCCGATGCaagcaacaaaaaaaaagttcgttATATTTATAAGAGCGTAGATGAAGTCATCCAACAAGGCAAGACTGGAAAAGTCAAGAAAGATTATAGCCACTTAAGCAAAGTGAAAGTTATCGATATGACTGGTCCAGAACAGCGGATCCTGAGTGGTTATCACGCTATTGCTGGCCAGCAGCGACCGTCCGATCAATGGGAGATACGGAAAGAGAAAGAGTTTACCAACTTTGCTCTACCCGAACTTCAACATAATCTAAACTTGCTGATGGATATGTGCGAACAGGACATTATCCAGAATGATCGTAAACTACGCCATGCCAGCGACAGAATAGTTTCGTTAGAGCAAGAAGAAGGGAGTTTAACTCAAACTATAGACCAAGAAGCAAAATACATCAATACGCTAGAAGCGGTTCTGGCCATTGTAGAGCATGTGATGAACACAGATCACACTCAACCACTCTCTTTGGACCAAGCTGTTCAAGCGTTCCAGGATTTACAGGAAAAATATTACGAGGAGTACCGCTTGTACGAGATTGGAGATCTGGCGGCAACATTAATCGGACCAAAGATCAAGGACTTGCTCGCATCGTGGTCTCCATTGGACAACCCATTACAACATATCGAAATGTTCAAGCAATGGAAACTTATTCTCGAGACTGAGCAGTCAAACTCACTTTCGTCCGTGTCGTCACAGGATCCGTATCACCGGCTGGTGTGGCATGCTTGGATACCAAGCATCAGGCAAGCTGTGAATCATTGGAGTGTTCGTGCCTGTGACCCTCTAATTCTATTGTTGGAATCGTGGTCACCGTTACTTCCCAACTGGGTGATGGACAACATTCGTGAGCAACTTGTGTTACCTCGCATTCAAACCGAGGTGGACGACTGGAACCCAATGACCGACACTGTTCCAATACACTCGTGGATACATCCGTGGTTGCCCTTACTTGGTAACCGCCTTGAAACTACCGTTTACCCAGTCATTAGGCACAAGCTGAGCAAAGCTCTCGTCAACTGGCACCCGTCAGATAGGTCAGCCAGGCTCATGTTACTACCCTGGCATAAAGTATTTCCTAAAGGGGATATGGATGCTTTTCTCGTCAAGAATATTCTACCCAAGCTACAAGTTACGATGCAGGAATTAGTCATCAATCCTCACCAGCAACATCTGGAACAATGGAATTGGGTGATGGAATGGCAAGATCTAATACCCGTCATATGTTTTGCTACTCTTCTTGAGAAGGCATTCTTTCCCAAGTGGTTACAAATTCTCACGCTTTGGCTGAACCATGCACCCAATTATGACGAAATAACCAACTGGTATTGCGGATGGAAAGGGATGGTTTCAGAAAGTTTACTTGCCCAACCCTCTGTCAAAGAGAATTTCCGCAAAGCTTTGGATATGATGAACCGAGCAGTAAGTTCTCCAAGTGTCAGCGCAGTTCCAGGTGGCGTGGAGTCAGTTTCATACTTGACTAATATGGAGCATACAGCTCCTCCGAAACCAAAAGAGCAGGATACAGCACGTTATGAGTTTTTGGCCGAGGCTGTCCGTACTGCTAGCCAGATACCACAAGGCTTTAAGGAGTTGATACAGAAACGTTGTGAAGAGCGTAATATTATCTTTGTTCCAATGGTGAATCGGTTACGAGAAGGGAAACAGGTGTATCGATGTGGCAAGATTCAGATTTATATTGATCGCTCTGTGGTATTCGTCAGTGAGAACAATGGAAGCACATGGAGCCCTTCATCTTTGAACAGCATGCTCGACTTGGCAATGTGA
Protein Sequence
MSEEELEKFEVTDFDLENEFNINRPSRRVSKNQQIYGIWADDSDDENPGTSRPSFKTSAKGKHNYTAPVSFISGGLQNAEKKKEISSSSTSKANKDDDNDDDEEVEMEGRGGFGNRKQRRDMNNSSSEEDEEIRPQSSKFRQQFDQGISIDGDIAGLRKKRTPLNPTLIQKGVGNWERHTKGIGAKLLLQMGYQPGKGLGKELQGIQAPVEARLRKGRGAIGAYGPEVKQKLADIHHESAKQEETKEVEEKVSLWRRGDSDASNKKKVRYIYKSVDEVIQQGKTGKVKKDYSHLSKVKVIDMTGPEQRILSGYHAIAGQQRPSDQWEIRKEKEFTNFALPELQHNLNLLMDMCEQDIIQNDRKLRHASDRIVSLEQEEGSLTQTIDQEAKYINTLEAVLAIVEHVMNTDHTQPLSLDQAVQAFQDLQEKYYEEYRLYEIGDLAATLIGPKIKDLLASWSPLDNPLQHIEMFKQWKLILETEQSNSLSSVSSQDPYHRLVWHAWIPSIRQAVNHWSVRACDPLILLLESWSPLLPNWVMDNIREQLVLPRIQTEVDDWNPMTDTVPIHSWIHPWLPLLGNRLETTVYPVIRHKLSKALVNWHPSDRSARLMLLPWHKVFPKGDMDAFLVKNILPKLQVTMQELVINPHQQHLEQWNWVMEWQDLIPVICFATLLEKAFFPKWLQILTLWLNHAPNYDEITNWYCGWKGMVSESLLAQPSVKENFRKALDMMNRAVSSPSVSAVPGGVESVSYLTNMEHTAPPKPKEQDTARYEFLAEAVRTASQIPQGFKELIQKRCEERNIIFVPMVNRLREGKQVYRCGKIQIYIDRSVVFVSENNGSTWSPSSLNSMLDLAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00894785;
90% Identity
iTF_00242194;
80% Identity
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