Bris016810.1
Basic Information
- Insect
- Brachyptera risi
- Gene Symbol
- -
- Assembly
- GCA_964007535.1
- Location
- OZ023330.1:37466205-37481065[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-08 0.00044 20.7 0.1 44 135 46 136 40 148 0.67 2 2 2.9e-05 1.2 9.5 0.0 324 381 191 252 181 272 0.75
Sequence Information
- Coding Sequence
- ATGCCGTCCTCAAAAGTTCGTCGACAGCTTCATTTGGACCAGTTTCTATTTCCTTCGACGCCATTCTTCAATAACAAATCGCAAATGTGCAATCCAATCGAGTCGATAGAAAGATTCGTGACGCCTTCGGCCGCCGACCGAGTAACTCAACAGATCCAAAGCAAGCTCGGCAACTACGAGCGGGTGAAACAACTATTAGAAGACGAGCCTAAATGTCTTATCGGCATCACCGGCGGCCTCCATCCGTCGGCAAATTCCGCCCCCGGGGGTGGTCCGACACCTTCAGCTGCATCACGCCTCCAACCGCCGCCACCGTCGTCGTCGGAATTCAAAAAACCATCCTCGCACAGTAGCAACAGTGGTGGCAGCGGCAGGATAAATCATCACAATCACCACAGCCAGCCTCGCGGTGGTTTCGTCAAGCCTGCCGAAGGGAAACCACCGTACGGAGGCCGGGGCGGTTATCCGGGACAGCCTGGCAAGTGTGGTGTCGGCAGTAACGACCACAGATCTAATGGTATTGTACCGACGAAGGGGCCGCCGATACCGTCGTCGAGCAGGATTCACCAAGCCAGCAAGAACCTGCCCAGATTACACGTCGAGTCGGGTCAGGGACAAGGCCAGAGAGATAGTAACGGCAGTGGACAAGGGGAAGTTGAGAGTATACTTAAGGAAATGCGTGAAGTAATTTCGGGCATGCCTCTTTCGGGCATCGCGACGCCACGCAAGGAGCCCGACAACAAGTTCGTCTTCAACCCACTGCTAGCCAAGATTACCGAGGTCGTACGTCCCCAACCATCCATCGATGTCAATCGATCTCGTAAGTAG
- Protein Sequence
- MPSSKVRRQLHLDQFLFPSTPFFNNKSQMCNPIESIERFVTPSAADRVTQQIQSKLGNYERVKQLLEDEPKCLIGITGGLHPSANSAPGGGPTPSAASRLQPPPPSSSEFKKPSSHSSNSGGSGRINHHNHHSQPRGGFVKPAEGKPPYGGRGGYPGQPGKCGVGSNDHRSNGIVPTKGPPIPSSSRIHQASKNLPRLHVESGQGQGQRDSNGSGQGEVESILKEMREVISGMPLSGIATPRKEPDNKFVFNPLLAKITEVVRPQPSIDVNRSRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00242188;
- 90% Identity
- iTF_00242188;
- 80% Identity
- -