Bris005608.1
Basic Information
- Insect
- Brachyptera risi
- Gene Symbol
- retn
- Assembly
- GCA_964007535.1
- Location
- OZ023326.1:78655566-78673979[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-20 2.4e-16 61.0 0.0 15 89 35 107 25 107 0.93 2 2 5.6 3.1e+04 -3.5 0.0 26 38 255 267 235 268 0.70
Sequence Information
- Coding Sequence
- ATGTCCAGCCGAGTTGACAGGCCGGCAAACCTGGCGTGTCTACGCACATGTGCGCTATCGCACGACGAAGATCTGCGATTCGTCGTCGTCAGAATCGCTCCAGCTCAAAGGACGCCGATCAACCGGCTGCCAATCATGGCCAAGTCCGTGCTGGACTTATACGAGCTGTACAACCTAGTCATCGCGCGCGGCGGACTGGTCGACGTCATCAACAAGAAGCTATGGCAGGAGATCATCAAAGGCCTGCACCTGCCGTCGTCCATCACCTCGGCGGCGTTCACGCTGCGGACACAATACATGAAGTACCTTTACCCCTACGAATGTGACAAGCGACGCCTGAGTACGCCGTCCGAGCTACAGGCCGCCATCGACGGAAACCGCAGAGAAGGACGGCGCAGCAGCTACGGCTCGTACGCAGAGATGGTTCAGCGCAGCCCCGGCGCCAATCTGCCGCCGAATCATTCACAAATGTCACCGCTCAGTCTCGTGACGAGCAGTCATCGACAGATGATGAACGGAAACTCGAATAACCACCATCATCACCCCTCGCACCATCCAGTGCATCCTCAGTCGCTTGCACAACACATGGGAGGAGTTCCAATACCAGGAATGGCTCCAAACGAGTTTGAAGCTCGAATGGTCGAATACGTAAAACTCTTAAACAAAGAACTGAGAGACGCAAACGGCACCTCACCGATTGCACGACAAGGTTCCACGTCACCTCCCTCTTCCACGTCGCCGCAAGAAGCAGCGATGAACGCCCTGGAGATGAGCCGACTAACATTATGGAACCTTTACAACAATAATATCAGCAGTCCGATACTTCCGCCCGTCGAGCCGCAGAAAGAGGCTCTAAATCTGGGCGTACGGGAGCAGGAGGCACGGGCCAGGCAGGAGGCGATGATCGTTAAGAGAGAAGTGGAAGAATCTATTGACCAACCACCAGCGAAGAGGATACTTTCAGACGATGACAGTATGAAGATGCACCATGGAGGAGGCACACATATTAAAATTGCTAGCAGAGGGGATGGCAGAGCGGGCCAGGATAATTCGCTCGTAGTCAGTATGGATATCAACGGCATCATGTACCAAGGTGTTCTGTTTGCCCAAAGTGCGAGGAATAATCGCCTGTCGTGA
- Protein Sequence
- MSSRVDRPANLACLRTCALSHDEDLRFVVVRIAPAQRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKRRLSTPSELQAAIDGNRREGRRSSYGSYAEMVQRSPGANLPPNHSQMSPLSLVTSSHRQMMNGNSNNHHHHPSHHPVHPQSLAQHMGGVPIPGMAPNEFEARMVEYVKLLNKELRDANGTSPIARQGSTSPPSSTSPQEAAMNALEMSRLTLWNLYNNNISSPILPPVEPQKEALNLGVREQEARARQEAMIVKREVEESIDQPPAKRILSDDDSMKMHHGGGTHIKIASRGDGRAGQDNSLVVSMDINGIMYQGVLFAQSARNNRLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241948;
- 90% Identity
- iTF_00241948;
- 80% Identity
- -