Bput016711.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- retn
- Assembly
- GCA_907164805.1
- Location
- OU015462.1:57785636-57793943[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-20 1.3e-16 61.7 0.0 13 89 1 75 1 75 0.94 2 2 5.4 2.4e+04 -3.3 0.0 26 38 223 235 202 236 0.69
Sequence Information
- Coding Sequence
- ATGGCCAACCATCGGACGCCGATTAATCGGCTGCCAATCATGGCCAAGTCCGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGACTTGTCGACGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGGCTTCATCTGCCGTCGTCCATCACCTCGGCGGCGTTCACGCTACGGACACAATATATGAAGTACCTGTACCCCTACGAATGTGACAAGCGACGACTGAGTACGCCGTCCGAGCTTCAAGCCGCTATCGACGGAAACCGTCGAGAAGGTCGCCGCAGCAGCTACGGCTCGTACGCAGAGATGGTGCAGCGTAGCCCCGGCGCCAATCTGCCGCCCAATCATTCACAAATGTCACCGCTTAGTCTCGTGACGAGCAGTCATCGACAGATGATGAACGGAAACTCGAATAATCACCATCATCACCCCTCGCACCACCCAGTGCATCCACAGTCGCTTGCACAACACATGGGAGGAGTACCAATACCAGGAATGGCACCAAATGAATTCGAAGCTCGAATGGTCGAATACGTAAAACTCTTAAACAAAGAACTCCGAGATGCAAACGGCACGTCGCCGATTGCCCGTCAAGGTTCCACGTCACCTCCCTCTTCCACGTCGCCGCAAGAAGCAGCGATGAACGCGCTGGAGATGAGTCGACTAACGTTATGGAACCTCTACAACAATAACATCAGCAGTCCGATACTTCCTCCCGTCGAGCCGCAGAAAGAGGCGTTAAATCTGGGCGTGCGGGAGCAGGAAGCCCGAGCCAGGCAAGAGGCGATGATCGTCAAGAGAGAAGTGGAAGATTCTATCGATCAACCGCCAGCAAAGAGGATACTTTCAGACGACGATAGTATGAAGATGCTCCATGGCGGAGGCACACATATTAAAATTGCTAGCAGAGGTGACGGCAGAGCGGGCCAGGACAATTCGCTCGTAGTCAGTATGGATATCAACGGCATCATGTACCAAGGTGTTCTGTTTGCCCAAAGTGCGAGGAATAATCGCCTGTCGTGA
- Protein Sequence
- MANHRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKRRLSTPSELQAAIDGNRREGRRSSYGSYAEMVQRSPGANLPPNHSQMSPLSLVTSSHRQMMNGNSNNHHHHPSHHPVHPQSLAQHMGGVPIPGMAPNEFEARMVEYVKLLNKELRDANGTSPIARQGSTSPPSSTSPQEAAMNALEMSRLTLWNLYNNNISSPILPPVEPQKEALNLGVREQEARARQEAMIVKREVEDSIDQPPAKRILSDDDSMKMLHGGGTHIKIASRGDGRAGQDNSLVVSMDINGIMYQGVLFAQSARNNRLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00242938;
- 90% Identity
- iTF_00242938;
- 80% Identity
- -