Basic Information

Insect: Brachyptera putata
Gene Symbol: Rreb1
Assembly: GCA_907164805.1
Location: OU015469.1:18974636-18983822[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 7.2e-05 0.0063 17.8 0.9 1 23 148 170 148 170 0.98

2 16 3.8e-05 0.0034 18.7 0.3 1 23 186 208 186 208 0.98

3 16 7.6e-05 0.0067 17.7 2.1 1 23 214 236 214 236 0.99

4 16 2.5 2.2e+02 3.5 0.1 1 23 333 357 333 357 0.87

5 16 6.3 5.6e+02 2.3 3.6 2 23 363 385 362 386 0.93

6 16 0.25 22 6.7 0.8 1 19 436 454 436 457 0.81

7 16 0.13 11 7.6 0.1 1 23 602 624 602 624 0.96

8 16 0.034 3 9.4 0.2 1 23 631 653 631 653 0.98

9 16 0.0014 0.12 13.8 3.1 1 23 659 682 659 682 0.97

10 16 0.0034 0.31 12.5 3.3 1 23 1085 1108 1085 1108 0.95

11 16 0.0004 0.036 15.5 1.3 2 23 1411 1432 1410 1432 0.97

12 16 0.22 19 6.8 5.2 1 23 1438 1461 1438 1461 0.97

13 16 0.0023 0.2 13.1 3.0 1 23 1495 1519 1495 1519 0.97

14 16 3.2 2.9e+02 3.2 0.4 1 23 1575 1598 1575 1598 0.93

15 16 0.0055 0.48 11.9 0.5 3 23 1653 1673 1651 1673 0.96

16 16 0.012 1.1 10.8 5.9 1 23 1679 1701 1679 1701 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	7.2e-05	0.0063	17.8	0.9	1	23	148	170	148	170	0.98
2	16	3.8e-05	0.0034	18.7	0.3	1	23	186	208	186	208	0.98
3	16	7.6e-05	0.0067	17.7	2.1	1	23	214	236	214	236	0.99
4	16	2.5	2.2e+02	3.5	0.1	1	23	333	357	333	357	0.87
5	16	6.3	5.6e+02	2.3	3.6	2	23	363	385	362	386	0.93
6	16	0.25	22	6.7	0.8	1	19	436	454	436	457	0.81
7	16	0.13	11	7.6	0.1	1	23	602	624	602	624	0.96
8	16	0.034	3	9.4	0.2	1	23	631	653	631	653	0.98
9	16	0.0014	0.12	13.8	3.1	1	23	659	682	659	682	0.97
10	16	0.0034	0.31	12.5	3.3	1	23	1085	1108	1085	1108	0.95
11	16	0.0004	0.036	15.5	1.3	2	23	1411	1432	1410	1432	0.97
12	16	0.22	19	6.8	5.2	1	23	1438	1461	1438	1461	0.97
13	16	0.0023	0.2	13.1	3.0	1	23	1495	1519	1495	1519	0.97
14	16	3.2	2.9e+02	3.2	0.4	1	23	1575	1598	1575	1598	0.93
15	16	0.0055	0.48	11.9	0.5	3	23	1653	1673	1651	1673	0.96
16	16	0.012	1.1	10.8	5.9	1	23	1679	1701	1679	1701	0.98

Sequence Information

Coding Sequence: ATGCAAGATATGACCACTGTGCAGCAGCACTGTACGGTGTCGGCCGCTACGTCGCCTCCACCTGTCCAAGAAGCCACGTCAAACACTGACGCGGAGACACGGCACGAGTCCTCGCAAGCGAGTAGCGACGACAGCCGAACGTCGTCGCCCGAACACAACGATCTCTCAACGACCAGACGGCACAAGATCACCACCGCCGTCGACCTGAAATGCCAAAACAACAACGAAATCAACGAGAACAACGAGAATCTCATATCGAAATACGAATTGCCAAAGAAAATGAATACGAATTTGAACGTCAGTTCGAACGTTTCCGAGAACAACGAAGATTATTCCGACGGCGAAAGTGTCAAGGATACGAGTTCGCTGAAATCCGATCGGGACGACGCCAAAATGGAGACTAGTCAAGACGTCGATAGCGGCGCGGATTCGGAGATGAAATACATGTGTCCGATATGCGAGAAGATCCTCTCGTCCCAACACGATTTCACTCTGCACATCCGTTCCCATAACAACGACAACGAGACGGCCGAGATCGCTTTCTCGCCCAAGGGTTACTCGTGCAAGATCTGCAACAAAGTGCTCAGTTCGTCCAGCTCTTTGGACCGACACGTTCTCGTGCATTCTGGCGAACGGCCGTTCAAGTGCCGTGTCTGCGCCGTGGCGTTCACGACCAACGGTAACATGCACCGTCACATGCGGACCCACAACAGTCCCAAGTCTAACGACTATGAGAGCGATGGCAGCACGGACTCGACCGGCTCCTTGAACCAGAACGGGAAGAGTCCCGGATCGCCGACCAACAATAACAACAACAAGAAACGTCGCGTCGGCACGCCGGGAATGGAACAGGAGAAAACGCCGGAACTTTCTCCCGAGGCTAATAACAATAACAAAAGAAAAGTGGCGGAGATCCTCGGAACAGAAGTCGATCCAGGAAAGCGGCGCATGAAAAACCTGGGTAATACCGTACCTGAATATTGCACCCCGCAACGGTTTCAATGTCCCGTTTGCGAACGGGAGGATTTCGCTTCGTTGAACGTCCTTGAGACCCACCTGGAGTCGTCCCATCCCGAGTACAAGATCCGTTGCCGCAGCTGCGACCTCGACTTCAAGAACCACCGAGTGTTGAATCTCCACCGCTTCATGGTCCATCACGACAAGGAGACGTCCAGCAACTTTAACGCGTCCGTCCTCGGCTTCAAGGACTTGACCTTCATGGACTTCTCGAGCGAGAAGTTCCCGCACATCGCGCGGACCGTCTGCGAGCAGAAGCTGCACCAGGCATCGTCGGCATACCACAACTTCCAGTGCGACAAGTGCGGGCGCGCTTTCCCCTGCGGCTCGGCGCTCAGCATCCACCACAATGATTGTTACAACTCCGCGGAGAGACCGGACTCCGACGAGGGCGACTCTCCCACCGATCTCTCCCGCAGAACGACGCCCGTCAAAGACCGGGTCTCCAGCGACGAAGAAGTCGAGGAGAAGAAGAGGGAAGATTTTTTCGCCGGGTTGGATCTACAGAACAAGTCGGTACCGACCTCCCCGGTGACGCCGTTGAAACGTCAGGATCAGAAATTCGAGAGCGCGTCCTATTTCAGTTCCGAGCCGAAAGATCTGGCCGACATTCAGAGTATAATATCAGTGAGTAATACCGGCGGACTCCGACTCCAAGATCTGACGAAGTCGCCCGTTGTCAACGGCAGTTTAACGCCGTCGGATCGGAGCTTTTCGGATGCCAACGAAGAGGAACAACAGGACTGTTTTGCGTCGGAATTCAGGAAGATGAAACTGAAGGGAGAATTTCCATGTCGTTTGTGTTCGGCGGTTTTCCCGAACCTGCGCGCTCTCAAGGGTCACAATCGTGCGCACTTGGTGTCGGGAAACCTGTTCCGGTGCAACATGTGTCCGTATTCGAACGCCGACAAGGCGATACTGATACGTCACATGCGTTCGCACAACGGCGACCGCCCGTACGAGTGTTCGCTGTGCAACTACGCGTTCACGACCAAGGCCAACTGCGAGAGACATTTGCGCAATCGTCATTCGAAGCTCGGCAGAGACGAGGTGAAAAAGTCGATCATTTATCATCCTTCCGAAGATCCGACGAACGATCTCGAATTACAGGCGAAGATTTCTAGCGGGAGCGATGCGAAACGATCTCTGAACTTCAATCACTCCACGGAGGATCTGAGTCAGCCTGAACGTTTCGAAGAAAAATACCAAAACAAAATTAGTCCTGAAAAGTCGAAGACTGGTTTCGAACGATTCGATAGTTTTGCCGTCGATAGACGTTCGCCCGTTGTAGTCATAAATGATCGCCCTTGGGACACGCATGAAGTCGCAACTATGACTAGTCCAAATTGCGATGACAGCGAGTCGGGTAACGAGAGCGATAACAGCAACGACGATAATAACTTAGTCAATTTAACCATAAACAACAACAACAATAATCTACCTTTCAAATTATCCGAGCACCAAAGAATTAATTCGAGTCAGTACAGTCCGAATAACAACACCCCGTTGGACTTGAGCATGGATGTGTTGGATCTCAGCAAGAAGAGTACCAACAGCGCGACAAAAACTATCGATTGCGAACCTCAGGATTTGTCGAAGAAGTCGAGTCCGCCCGAGTACAACAACAACGCGAAGAAATATATTTCCGTTGTCGAGAAATCCCAACTGCAAGCGCAGTTGATGTCGAGACCTCCGAGTCCAACTCCAAACCAAATGCCGAAAGTCGATCTCAATATGGCAAGCTTTTACGCAGCGAATCCGCACGCCATCTACATGAACAACAACGCATTTCCTTTCCCTCCTTCCCCTTTCATGAACCCTTACTTCATCCCACCACAGCATCCCATGGGGCTCCTTCCACCCGCCAACCTTCAGGAGTTTGCCGAGATGCGGGACAGGAGCCTGAAGGAGTTGATCCGAGGATTGCAGATGTCCGGAGGCACGATGCTGGACCCTATCGCCATGGCAACCGCAGCCGACAAATTGCAGCAGCTCCATCAGCAGGCGATAGCCGAGTTTGCTCGCAATAAAGAGATGCAGTTCAATGAGAGCAAGGTGGAAGAACGGACGCCGGTGAAGGAGGAGAAGGTGGTGACGAACATCGCCAAGCTGGCGATCAACAAGGTGAACCCGTTGAAGACACGAGAACGAGACAACTCGTCGGTGAAGATGGTGATAAAGAACGGCGTGCTGATGCCGAAACAGAAGCAACGTCGTTACCGAACGGAACGTCCATTCTTTTGCGAACATTGTTCGGCGAGATTCACGCTCCGTTCGAACATGGAACGGCACATCAAGCAACAACACCCGGAGTTCTGGACGCAACGGCAGCGCGGGAACGTGAGCGGAGGACGCAGGAACCCTAACGCGAGTCTCGGTCAAGACTCGAATAGTCAAAATCCCACCGAACTGAAGGGGGACGGGTTAAACAAATCTCAGCCAATGAGCTTACAGATACCAAATCACGTGTCGATGGTGAACAATTATTCGGGTAGTTTCGACATGAAACCAAAGAGCGTCGAAGAGATCTACGAAACCAAAGAGAAACATAATATCGCTAACAATAATAACAATAAGGTGTTTATTTCTGACGAAGTGAAATATGCCATCGCTCAACAACTCAAGTCGAAACTGAACAATCCGATTCAGAAACAATTCCGAGAAGAAACCGAAGAAGACGACGAGTTGATCATCGACGAAGAAGACAACGAAGACGACAAAACCAAAGATGAAGAAGTGAAAAACGCAAAGAATTCCGAACTCGCTCGAAGGGACGTCGATTTCGAAGAGGGCTATAAATCGTTCAAAGACACGTTCTTTCGCGGCATGAAGTCGGAATCGAAACTGGATCTGTATAAAGGCATCCAGAACGTGGACCTGAAGGGGTACCTGAAGGAGGCAAAGGAGCGGGGGTACTTGAAGGAGATGGAGATGCGCCGGAAGGAGATGAAGAGCAAGGAGGAGAGCGTGGACCTTGCGAGCGTCAGTCGGCTGCTGGACAACGCCACGACGCAGACGCAGGCGTTCCAGCAGTACTTCCAGCGGGCGCAGGATCACGAGGAGGAGGGGCATGCGGACGAGGGGTCGGAGGACGACGAGGAAGGACTCGTTGCCGCTAGCGACCACTCGGGCAGCGACGAGAACAGATCTGACCTTGAGAACGGCGCTACCAACAAGAAGAAGAGCGCCTACTCGCTCGCACCTAACCGCGTGTCGTGCCCGTACTGCCACCGCAAGTTCCCCTGGTCGTCGTCCCTCCGTCGGCACGTTCTCACCCACACCGGTCAGAAGCCGTACAAGTGCGCCCACTGCCCGCTCCTCTTCACCACCAAGTCCAACTGCGACCGCCACCTTCTGCGCAAGCACGCCAACACCACCCCCCCGACCGCCACCCCCGACACCTCCCCCCTCGCTCCTCAGGCCCCCCAGACGTCCTACACCATGCGCAACGTCCCCGAACGCCCTTACAAATGTAACCATTGTCCCAGTTCGACGTTCTCAACCCTCAGCAACTTGAAGAAACACGTAGCGACGAAACATCCAAATTCCGCGACGAAAATCGATGAGGTCGCTAGCAACGACGAGAGCCACGACAGCGAGGAGGAGAACGAAGAGGAACCGATGGTCGCGGAGAAGCCGGTCGCGGAGCCGGGACGCGGACTGGGAGACGCGGCGTCGACGACTTCGTCCACGTCCGACCTGCCGTTCAAGTGTCACCTGTGCGAGGGGTCGTACGGAGAGAGGCAGGAGGCGCTGGAGCACATCCGGGAGAACCATCCGACCGAGTTCACGTTGTTGATGTCGAAGGGGGCGCTGGAGAACAACGGGGGAGCGCACGAGGATAATAACGGGAACGGGCCGGAAGAGGTGACGCCCGGGGAGGAGAGTTTGGAGCAGCTGAGAGGGAAGTTTCCGGACTACGCAAACAGGAAGGTGATGTGTGCGTTCTGCCTGCGTCGCTTCTGGTCGGCGGAAGACCTGCGCCGTCACATGCGCACCCATACCGGCGAACGCCCTTTCAGCTGTGACATCTGTCGGCGCCGCTTCACGCTCAAGCACTCGATGCTGCGCCACCGCAAGAAGCACAGCGCCACCGACGCATCGCCGTTGAGCGGAGACGACGAGCCGACCTACAAGACGTCGCGGTACGACGACAAGGGTGAGAAACGATCCAACGGTTTCCCGACGGCTCAGCCGGTCAAAACGGAGAAGAATCAGTTCGCGGATAACAACGCGAGAATCAACGGGTTTCTCGACAGTCAGAACGGCAAGGTCAAACTGACGAACCATAATAATAATAATATAATGGGTACGATGAAGAATTTGACGTCGCGATATATCATGGAGAACCCGTGGCCGGGCGCCAACGGGGATAATAAGTTCCCGGACGAGCGGAGAGACAAAGAGGACGAAACCGACTTGATCGGGAATCTGTTGGGAATACAAGATAAATCTATTATCGATAAAATGTTGGTTTCGAAGTCGGCGGACGATGCGGCTAAGCTTCTCGGTGTTGGCAATCGTGAATGA
Protein Sequence: MQDMTTVQQHCTVSAATSPPPVQEATSNTDAETRHESSQASSDDSRTSSPEHNDLSTTRRHKITTAVDLKCQNNNEINENNENLISKYELPKKMNTNLNVSSNVSENNEDYSDGESVKDTSSLKSDRDDAKMETSQDVDSGADSEMKYMCPICEKILSSQHDFTLHIRSHNNDNETAEIAFSPKGYSCKICNKVLSSSSSLDRHVLVHSGERPFKCRVCAVAFTTNGNMHRHMRTHNSPKSNDYESDGSTDSTGSLNQNGKSPGSPTNNNNNKKRRVGTPGMEQEKTPELSPEANNNNKRKVAEILGTEVDPGKRRMKNLGNTVPEYCTPQRFQCPVCEREDFASLNVLETHLESSHPEYKIRCRSCDLDFKNHRVLNLHRFMVHHDKETSSNFNASVLGFKDLTFMDFSSEKFPHIARTVCEQKLHQASSAYHNFQCDKCGRAFPCGSALSIHHNDCYNSAERPDSDEGDSPTDLSRRTTPVKDRVSSDEEVEEKKREDFFAGLDLQNKSVPTSPVTPLKRQDQKFESASYFSSEPKDLADIQSIISVSNTGGLRLQDLTKSPVVNGSLTPSDRSFSDANEEEQQDCFASEFRKMKLKGEFPCRLCSAVFPNLRALKGHNRAHLVSGNLFRCNMCPYSNADKAILIRHMRSHNGDRPYECSLCNYAFTTKANCERHLRNRHSKLGRDEVKKSIIYHPSEDPTNDLELQAKISSGSDAKRSLNFNHSTEDLSQPERFEEKYQNKISPEKSKTGFERFDSFAVDRRSPVVVINDRPWDTHEVATMTSPNCDDSESGNESDNSNDDNNLVNLTINNNNNNLPFKLSEHQRINSSQYSPNNNTPLDLSMDVLDLSKKSTNSATKTIDCEPQDLSKKSSPPEYNNNAKKYISVVEKSQLQAQLMSRPPSPTPNQMPKVDLNMASFYAANPHAIYMNNNAFPFPPSPFMNPYFIPPQHPMGLLPPANLQEFAEMRDRSLKELIRGLQMSGGTMLDPIAMATAADKLQQLHQQAIAEFARNKEMQFNESKVEERTPVKEEKVVTNIAKLAINKVNPLKTRERDNSSVKMVIKNGVLMPKQKQRRYRTERPFFCEHCSARFTLRSNMERHIKQQHPEFWTQRQRGNVSGGRRNPNASLGQDSNSQNPTELKGDGLNKSQPMSLQIPNHVSMVNNYSGSFDMKPKSVEEIYETKEKHNIANNNNNKVFISDEVKYAIAQQLKSKLNNPIQKQFREETEEDDELIIDEEDNEDDKTKDEEVKNAKNSELARRDVDFEEGYKSFKDTFFRGMKSESKLDLYKGIQNVDLKGYLKEAKERGYLKEMEMRRKEMKSKEESVDLASVSRLLDNATTQTQAFQQYFQRAQDHEEEGHADEGSEDDEEGLVAASDHSGSDENRSDLENGATNKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPYKCAHCPLLFTTKSNCDRHLLRKHANTTPPTATPDTSPLAPQAPQTSYTMRNVPERPYKCNHCPSSTFSTLSNLKKHVATKHPNSATKIDEVASNDESHDSEEENEEEPMVAEKPVAEPGRGLGDAASTTSSTSDLPFKCHLCEGSYGERQEALEHIRENHPTEFTLLMSKGALENNGGAHEDNNGNGPEEVTPGEESLEQLRGKFPDYANRKVMCAFCLRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHSATDASPLSGDDEPTYKTSRYDDKGEKRSNGFPTAQPVKTEKNQFADNNARINGFLDSQNGKVKLTNHNNNNIMGTMKNLTSRYIMENPWPGANGDNKFPDERRDKEDETDLIGNLLGIQDKSIIDKMLVSKSADDAAKLLGVGNRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00243611;
90% Identity: iTF_00243611;
80% Identity: -