Basic Information

Insect: Brachyptera putata
Gene Symbol: -
Assembly: GCA_907164805.1
Location: OU015475.1:1324971-1327503[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0028 0.25 12.8 0.5 2 23 173 194 173 194 0.97

2 14 0.00036 0.032 15.6 7.0 1 23 200 222 200 222 0.98

3 14 0.0001 0.0089 17.4 1.8 1 23 228 250 228 250 0.98

4 14 0.005 0.44 12.0 2.8 1 23 256 278 256 278 0.97

5 14 0.0061 0.54 11.7 7.2 1 23 284 306 284 306 0.98

6 14 0.00016 0.014 16.7 4.1 1 23 312 334 312 334 0.98

7 14 0.0033 0.29 12.6 7.1 1 23 340 362 340 362 0.98

8 14 0.00027 0.024 16.0 4.2 1 23 368 390 368 390 0.98

9 14 0.00055 0.049 15.0 3.2 1 23 396 418 396 418 0.98

10 14 0.00047 0.042 15.2 3.3 1 23 424 446 424 446 0.97

11 14 0.00012 0.011 17.1 3.1 1 23 452 474 452 474 0.98

12 14 9.9e-05 0.0087 17.4 3.7 1 23 480 502 480 502 0.98

13 14 0.00014 0.012 16.9 5.9 1 23 508 530 508 530 0.99

14 14 0.0028 0.25 12.8 0.8 1 23 536 558 536 558 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0028	0.25	12.8	0.5	2	23	173	194	173	194	0.97
2	14	0.00036	0.032	15.6	7.0	1	23	200	222	200	222	0.98
3	14	0.0001	0.0089	17.4	1.8	1	23	228	250	228	250	0.98
4	14	0.005	0.44	12.0	2.8	1	23	256	278	256	278	0.97
5	14	0.0061	0.54	11.7	7.2	1	23	284	306	284	306	0.98
6	14	0.00016	0.014	16.7	4.1	1	23	312	334	312	334	0.98
7	14	0.0033	0.29	12.6	7.1	1	23	340	362	340	362	0.98
8	14	0.00027	0.024	16.0	4.2	1	23	368	390	368	390	0.98
9	14	0.00055	0.049	15.0	3.2	1	23	396	418	396	418	0.98
10	14	0.00047	0.042	15.2	3.3	1	23	424	446	424	446	0.97
11	14	0.00012	0.011	17.1	3.1	1	23	452	474	452	474	0.98
12	14	9.9e-05	0.0087	17.4	3.7	1	23	480	502	480	502	0.98
13	14	0.00014	0.012	16.9	5.9	1	23	508	530	508	530	0.99
14	14	0.0028	0.25	12.8	0.8	1	23	536	558	536	558	0.98

Sequence Information

Coding Sequence: ATGGACCTGGACCCCTTGGCCTTTGTGGAGGTGACGCAAGATCACACGGACACTGACGTGACCGAGGAACCAAGGGACGAGTTGGAATCAGTGGCTGCTAACATGACCGTGTGTGAAGTAACGGGACGGGTCTTTAAGCCGACCGCTTCTAGCCCGGATAAAGCGATAGAACAAGACGGGCTGCTCGCTCCGGAACAGGAAGGATCGGATATCCCGGATCATGAACGTGCATTTCAACCCAAGGAGTTTGCGTTCGTGGTAGTTAAAGAAGAACCGTTGGAAGACGGTTCCAATTACCACGCCGACGACGTCGACATGGATTCAAGCGCAGACGATCTCACCGAACACGAAACCAACGCCGACCGAGTAACGCCCGAAACACCTTCTACGAGTGTGGACAAAGCACCAGAACCGACGCCAACAATCTCCCCCGGACGTAACGCCAAGACCAAACAATTATCAACGAAATACAAACAGATGAAAGCGAACAAAAGACCCGTCACAATTCTAAACAACACTTGCACCATTTGCGGCTACCAAGCAGAGAACAAAAGCTATCTGAAAATCCATTCGATGAAGCACACTGGCGAGAAACCATTTCAGTGCAAAGAATGTTCTTACAAATGTAGACAATCATGCGATCTCAAACGACATATGTTGATTCATTCCGGTATCCATCCCTTCCAGTGTAAACTATGCCCCTACAAGTGTCGATCCTCGAGCGCGTTAACCTCTCACGTATTAGTCCACACTGGCGAGAAACCTTTCCACTGCAAGCTGTGCGCTTACACGTCCAGGACGGCCAACTCCCTGACGACGCACATGATGAATCACACCATGGAGCTACCGTTCCACTGCGCCGAGTGCACGTTCCGTTGCAAGAAGCAAAGCACGTTGAAAACCCACATGTTGACGCACTCCGACGAACAACCGTACGAATGCAAACTGTGCGATTATAAATGTAAACAAGCGAGCACATTGAGGAATCACACGTTACGTCACGGCGGGGAAAAACCTTTCCATTGCGAACATTGCGATTATAAAGCGATGAGATCGACGCATTTGAAGAAACATATGATGGTGCATACGGGGGAGCGGCCGTTTCAATGTAAGGTGTGTTCGTATCGATGTCGAACTTCGAGTAATATGAATTCTCACGTGTTAACACATACCGATGAATTACCTTTCCAGTGCAAGGAGTGTGATTATAAATGTAATTTGAGTAGTAGTTTGAAAATTCACGTTTTGAAACATACTGGTGTGCAACCTTTTCAGTGTTTGGAATGTACGTATAAGACTTTTAAATCGTCTCATTTGAAAGCTCACATGATGATACATAGTGGGGTGAAACCGTTTCAGTGCGAGCAATGTACGTATAAGTGTTCACGTTCGTCCGATATGAAGATACATATGTTGATACATACTGGGGAAAATCCTTTTGAATGTAAGGAATGTGATTATAAATGTAGATCGTCGAGTGTTTTGAAGTCTCATATGTTGAAGCATTCCGCGGTTAAGCCGTTTGAATGTACGGAGTGTAGTCATAAGTGTAAGACGGCCACGTTGTTGAAGCGGCATATAAGGACGCATACGGGCGAGAAGCCGTACGAGTGTAAGATTTGCTTGGACAGGTTCGGACAGACCAACTACCTGAAGAGACACATGTTGATTCATGAGGGGGAAGTGACGGGAGTGTGTGGGGAGCGAGTTGAGGAGGGGAGATTGGCAGATGATTTGTTCAAGTGA
Protein Sequence: MDLDPLAFVEVTQDHTDTDVTEEPRDELESVAANMTVCEVTGRVFKPTASSPDKAIEQDGLLAPEQEGSDIPDHERAFQPKEFAFVVVKEEPLEDGSNYHADDVDMDSSADDLTEHETNADRVTPETPSTSVDKAPEPTPTISPGRNAKTKQLSTKYKQMKANKRPVTILNNTCTICGYQAENKSYLKIHSMKHTGEKPFQCKECSYKCRQSCDLKRHMLIHSGIHPFQCKLCPYKCRSSSALTSHVLVHTGEKPFHCKLCAYTSRTANSLTTHMMNHTMELPFHCAECTFRCKKQSTLKTHMLTHSDEQPYECKLCDYKCKQASTLRNHTLRHGGEKPFHCEHCDYKAMRSTHLKKHMMVHTGERPFQCKVCSYRCRTSSNMNSHVLTHTDELPFQCKECDYKCNLSSSLKIHVLKHTGVQPFQCLECTYKTFKSSHLKAHMMIHSGVKPFQCEQCTYKCSRSSDMKIHMLIHTGENPFECKECDYKCRSSSVLKSHMLKHSAVKPFECTECSHKCKTATLLKRHIRTHTGEKPYECKICLDRFGQTNYLKRHMLIHEGEVTGVCGERVEEGRLADDLFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00243517;
90% Identity: -
80% Identity: -