Basic Information

Insect: Brachyptera putata
Gene Symbol: V-UBI
Assembly: GCA_907164805.1
Location: OU015462.1:33359314-33369657[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0013 0.11 13.9 0.1 1 23 466 488 466 488 0.96

2 14 0.016 1.4 10.4 2.0 1 23 521 545 521 545 0.97

3 14 3.1e-06 0.00027 22.1 0.3 2 23 552 574 551 574 0.96

4 14 0.0034 0.3 12.6 0.4 3 23 582 602 580 602 0.97

5 14 0.0006 0.053 14.9 0.2 1 23 608 630 608 630 0.98

6 14 3.9e-06 0.00035 21.8 2.6 1 23 636 658 636 658 0.98

7 14 2.1 1.8e+02 3.8 0.1 3 23 670 692 669 692 0.95

8 14 1.1e-06 9.9e-05 23.5 0.8 1 23 708 730 708 730 0.99

9 14 1.1e-05 0.00097 20.4 2.1 1 23 736 758 736 758 0.97

10 14 4e-05 0.0035 18.6 1.8 1 23 764 786 764 786 0.98

11 14 0.085 7.6 8.1 1.2 1 23 792 814 792 814 0.94

12 14 0.0002 0.017 16.4 2.8 1 20 820 839 820 842 0.95

13 14 1.5e-07 1.3e-05 26.3 0.2 1 23 848 870 848 870 0.98

14 14 2e-05 0.0017 19.6 0.8 1 23 876 898 876 898 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0013	0.11	13.9	0.1	1	23	466	488	466	488	0.96
2	14	0.016	1.4	10.4	2.0	1	23	521	545	521	545	0.97
3	14	3.1e-06	0.00027	22.1	0.3	2	23	552	574	551	574	0.96
4	14	0.0034	0.3	12.6	0.4	3	23	582	602	580	602	0.97
5	14	0.0006	0.053	14.9	0.2	1	23	608	630	608	630	0.98
6	14	3.9e-06	0.00035	21.8	2.6	1	23	636	658	636	658	0.98
7	14	2.1	1.8e+02	3.8	0.1	3	23	670	692	669	692	0.95
8	14	1.1e-06	9.9e-05	23.5	0.8	1	23	708	730	708	730	0.99
9	14	1.1e-05	0.00097	20.4	2.1	1	23	736	758	736	758	0.97
10	14	4e-05	0.0035	18.6	1.8	1	23	764	786	764	786	0.98
11	14	0.085	7.6	8.1	1.2	1	23	792	814	792	814	0.94
12	14	0.0002	0.017	16.4	2.8	1	20	820	839	820	842	0.95
13	14	1.5e-07	1.3e-05	26.3	0.2	1	23	848	870	848	870	0.98
14	14	2e-05	0.0017	19.6	0.8	1	23	876	898	876	898	0.96

Sequence Information

Coding Sequence: ATGAAACTTGTGCTGCGGAACGTAACTGGAGAAACAATAACTCTCGAGGTCAATCAAGGAGACACATTTCGGGATCTGAAGGCTAGAATCTTTGAACAGTCGGGCATCCAGCTTGACCTTGAACAACTTAATTATAAAGGCAAAAGAATAACTGATGATCAAATCATCACCAAGTATTTTTTTGAAGGTCAAAACTCCAAGCCTAATAAATATCTACCAGACAGTACTTGTAATGAAACCGAGGTTACTTTGGAAGAGGAAGGAAGAACGTCTCCAGAAGAATGCAGTATTGCAACATTAGAAGAATGTAGTGTCCCCGGTTGCAACAACACAGTTACTCTGTGCCCAGGAAAAACATTCTTCAACTTTCCAACTGATGACGAAAGGTGTCAACACTGGTTATTAGTATGTAAGCGTCTTGATTTGCTCGACAAGCCGAGCGCATATGTGAGTCAGTATCACGCAATATGTCAGGATCACTTCTTAGTCGACCAGTTTGTAGACGATCTTCGTGTGAAGCTGAAACCTGGTGCTTTGCCATCTATAATCGACGTTGACTATCTAGGAGACGAGGGTATTCCCGAGGGCGATGAAATCGTTGCCGAAGGAACTCGATGTAACATAACTGTAAAAGAGGAGCCGTTCTACGAGTCTGACAGCGACGATGCCGATCAAGTGTCTGATGGTGATGACGATTTGCTGGACACTGACGACGGCCAGTCGGGATTACTATGCCGCCTCTGCGCTACCACCATCACAGAGACTGTGGCATTCATCTACAGTGAGGCTGGCAAGGAGATGAATATTGCACAGAAAATAAACATGGCATTGCCGGTTGCTGTTCGAAGTGTAGATCCATTGCCGAAACAACTTTGTGTGCCATGCCTGGAGAAAGTTAACTTATGCCACGAGTTTTCCGAACAGTGTATTCAAGCGGAGAGAAAGCTGCGTAGGCTCCATCGCCGGAGAATCTTCAAATCAACCATTGGTCCAGCAATGCCTGTGGAGAAGGACCCTGAAGCTGATAAAGACATAGAAATAACTGATGAGGCAAAAGTCACTTGTGGAGAGAATAAGGAAAATGATGATGCTTATTGTTGTCCACTATGCCACGTCGGTGAAATGGCCATCAAAGAAGACAATGACGCAGATAATATGTACGTGGAAGTAAGAAAGATGGATGGCATTATGGCTAATATGTACGGTGAAGACAGTGAAAGTAGCTCTTACGAAGATAATATCGATGAGGAGGAAATTTTTGGTTTGCCAAGCGACGACACCATCTCCCAATATTATAACACGAAAGAAAACCGAACGTGTCGCTTTTGTTCCGAAACATTTGATACTGTCGAGCTATGTTTGGGTCACGGTAAGACTCACACAGACACGGAGATCTTTCCTTGCAATCTTTGTGATCTGTCATTCTACACAGAGGCTGCTTATGAGAAACATTGGGACATCCATCGGCCTCTCGATGCGAAGATAACATGTCGAACGTGTGGCCGGTTAATCAACAAGCACAACATGCAGGATCATGTTTGCGGTAATACCCTCAAAGCATTCAAGTGCACGAAGAGCAACTGCGGAAAGTTTTTCCGCTCAGAGGAGCGCCTTGCTTTTCATCAACGAGTACACGACGGCGCTGATCCCGTTGTCTGTGGCTATTGCAACAAATCGTTCAGTCGTGAGACGAACTTGTTTGACCATGTTCGTATGGTGCACAAGGGAGAGAAACCATATGGATGTAACACGTGCGGAAAGTCATTCCAGTTGAAAGGGAGGCTTCTCGCTCATAGCCGGGTTCACACGGGTGAGCGGCCCTTCGAATGTGACATCTGTGGTGGCCGCTTCTACAATAATGCCACGTTGAAAGGTCATCGAGTTACTCACATGGAAATGAAGCCGTTCCAGTGCGATAAGTGTGGACGATGTTTTGCTCGGAAAGCGCTGTTCAACCAACATCAGTTGGTGCATCTAAGTGATGACATCCCGAAACAGCAGAGAGCTTGCAAGCTGTGTGGGGACATTGTGTTTGGTTCTTACGCAAAACTTCTGGAACATAGGAAGATCAACCACCCGGGTGTTGAAATCAAAGAGGAGGCAAACGTGTCTTCAAAACCGTTCCGTTGTGAGGAGTGTGGTAAATCGTTTGCATACCGTGTGACCTTGGTTACGCACCTGCGGAAGCATACTGGGGAGCTGCCATTTGATTGCCAGTACTGCGAGAAACGGTTCTCACAGAAACGTTCATTGATTCTGCACGAAAGGACGCATACTGGTGAGAAGCCATTTGAGTGTGAGGTATGCAAGAAGCGTTTTGCTCAAAGTGCCCACATGTACTCCCACATCCGCCTTCATACGGGCGAGAAACCATATGCGTGTGATCACTGCGATGCCACGTTTCGGCTCAAAGACGTTCGTGACTCGCATGTACGGAAGCATACCGGCGAGCGACCGTACAAGTGCGAGGTCTGTGAGAAAACGTTCCGTACATCTCACTCGTACTACCAGCACATGTGGATCCACCAGGGGAAAAAGCCGTACCCCTGTGGTTACTGCGGCAAAGCTTTCAGGCGTTCGAACGGACTCAAGATACACATCAGGATACACACGGGTGAAAAGCCGCATGCGTGTGAAGTGTGCGGTCGCGGATTTGCTCAGAAACAAGACATGAAGAAGCACATGAATCTACATCTTAACGGTAAACTATAG
Protein Sequence: MKLVLRNVTGETITLEVNQGDTFRDLKARIFEQSGIQLDLEQLNYKGKRITDDQIITKYFFEGQNSKPNKYLPDSTCNETEVTLEEEGRTSPEECSIATLEECSVPGCNNTVTLCPGKTFFNFPTDDERCQHWLLVCKRLDLLDKPSAYVSQYHAICQDHFLVDQFVDDLRVKLKPGALPSIIDVDYLGDEGIPEGDEIVAEGTRCNITVKEEPFYESDSDDADQVSDGDDDLLDTDDGQSGLLCRLCATTITETVAFIYSEAGKEMNIAQKINMALPVAVRSVDPLPKQLCVPCLEKVNLCHEFSEQCIQAERKLRRLHRRRIFKSTIGPAMPVEKDPEADKDIEITDEAKVTCGENKENDDAYCCPLCHVGEMAIKEDNDADNMYVEVRKMDGIMANMYGEDSESSSYEDNIDEEEIFGLPSDDTISQYYNTKENRTCRFCSETFDTVELCLGHGKTHTDTEIFPCNLCDLSFYTEAAYEKHWDIHRPLDAKITCRTCGRLINKHNMQDHVCGNTLKAFKCTKSNCGKFFRSEERLAFHQRVHDGADPVVCGYCNKSFSRETNLFDHVRMVHKGEKPYGCNTCGKSFQLKGRLLAHSRVHTGERPFECDICGGRFYNNATLKGHRVTHMEMKPFQCDKCGRCFARKALFNQHQLVHLSDDIPKQQRACKLCGDIVFGSYAKLLEHRKINHPGVEIKEEANVSSKPFRCEECGKSFAYRVTLVTHLRKHTGELPFDCQYCEKRFSQKRSLILHERTHTGEKPFECEVCKKRFAQSAHMYSHIRLHTGEKPYACDHCDATFRLKDVRDSHVRKHTGERPYKCEVCEKTFRTSHSYYQHMWIHQGKKPYPCGYCGKAFRRSNGLKIHIRIHTGEKPHACEVCGRGFAQKQDMKKHMNLHLNGKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00243491;
90% Identity: iTF_00243491;
80% Identity: iTF_00242272;