Bput032900.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- ttk
- Assembly
- GCA_907164805.1
- Location
- OU015468.1:4325282-4330295[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.047 45 4.8 0.1 2 36 221 255 220 262 0.75 2 4 3.3e-11 3.2e-08 34.1 0.0 3 37 272 305 270 312 0.87 3 4 1 9.9e+02 0.5 0.0 20 41 346 367 333 371 0.72 4 4 1.8e-11 1.8e-08 34.9 0.1 4 40 391 427 388 429 0.92
Sequence Information
- Coding Sequence
- ATGACTTCTAAACCTCAACACTATTGTCTTCAGTGGAATAATTACCAGACTCATGTTATTGAACTATTCGTTCAGTTGCTCGAAGCAAATAGCTTGGTTGACGTGACTCTAAGTGTCGAGAATAAAACTATATATGCACATCGAATCATTCTTTCTGCGTGCAGTTCGTACTTTCAGGAAATCTTCACAAATGCCGAAGACTCGCATCCCATAGTCATACTGAGCGAGATGAGATATGACGATGTTAAATCAGTCATTGAATTCATCTATCGGGGTGAATTAAGTGTAAGTGCGGAGCGAGTTGCATCTGTTCTACAAGTAGCCCAGGAATTAAAAGTCAGGGGACTTATGGAGGTTAGTAGTCACGTTCTGGAAATAGACCGTGAATCATCTGGTTTGTCCGACACTGTCGTCGATTGTTCAAGTGCACTTGAAGTTCCGTCGATTGAGCACTCTTTGAACGAAAACGTAAACGAGCTCGAGTTGGAAGAAGTTGAAATGGAAACGGATTCGTTTGTTGGTGAGGTCGAGGATGTGCTGTGTAATACAGATTCAAATCCGTTACTTGTCGAAGTGGGACGCAAAATTGCCAACGAGAAAGTCTGCGGAGAAGATATTAAAAAAATGCGTCGAAGAGACAGTAACAAAAAGAATTATAGTGAAGGCGCGATGAAAGAAGCGTTAGACGATCTCAGAGCGGGTCGGAGCTTACTAGAAACGTCAATATCTCGTCAAATTCCTCGTTCCACGCTGTACTTCCGTGCGAGGTCTCAAGGTGTTCCCATGGCCATCACACGCCAAGAACATTCTCAGGAGAAGATTTACGCTGCTGTACAAGCTGTTGTAGATGGTGCTAGTTTACAACAGGCGGCACAACAATACAAGATACCTAAAACTGTTCTGTGGCGTCGAGTGCATAAGGAGGAAGTAAATAAGACTCCCGGACGATCGGGTGCATACAACAGAAGTAAACCGCGTTACACTGCAGAAAACAGACGAGCCGCTGTGAGGGCATTAGAAACTGGTGGCAATCTTAGTAGAGTATCCGAACAGTTTCAAATACCAGTGACAACGTTGTTTCGTGATAAGTCACGCTTGGTTGAGACGGGACGATTGCCGTGGACATGTTTACGTAAACGCAACTTGAGTGGTGATAGTTTTAAGCAGCATCGTTTAGCAGAGGCAGTAGCTGCCTGCAAAGACGGGAAAATGTCTCAAGCTACTGCATCGATTACGTACAAGGTCCCAAAAACAACCATTTGGCGTCGGATGCAAAAGGGCATAAAAGATGACCCTGGATATTACGATGCCCATTGTGAAGAATATCCTGCTAGTATTGAATATCAAGAGCAATTAATCGAGTCTGAAGAAGTACACGAATGTGTTGTGCAACATCAACAGTCTGAATATTCTTTGGTCGAGATTGACAATTCAGAAATACCCGTCACGTATATTGGTGAAGACGCAGACTTTTCGGAAGCATCTCTTATTATTCTAAATGGGAGTGATGCTCAAACTATTGCATTGCCTGAACATGGAGAGCAGATAGTAGTAGATTCTGAAGGAAATGAAGTATTGGATTCAAGTGATACGTAA
- Protein Sequence
- MTSKPQHYCLQWNNYQTHVIELFVQLLEANSLVDVTLSVENKTIYAHRIILSACSSYFQEIFTNAEDSHPIVILSEMRYDDVKSVIEFIYRGELSVSAERVASVLQVAQELKVRGLMEVSSHVLEIDRESSGLSDTVVDCSSALEVPSIEHSLNENVNELELEEVEMETDSFVGEVEDVLCNTDSNPLLVEVGRKIANEKVCGEDIKKMRRRDSNKKNYSEGAMKEALDDLRAGRSLLETSISRQIPRSTLYFRARSQGVPMAITRQEHSQEKIYAAVQAVVDGASLQQAAQQYKIPKTVLWRRVHKEEVNKTPGRSGAYNRSKPRYTAENRRAAVRALETGGNLSRVSEQFQIPVTTLFRDKSRLVETGRLPWTCLRKRNLSGDSFKQHRLAEAVAACKDGKMSQATASITYKVPKTTIWRRMQKGIKDDPGYYDAHCEEYPASIEYQEQLIESEEVHECVVQHQQSEYSLVEIDNSEIPVTYIGEDADFSEASLIILNGSDAQTIALPEHGEQIVVDSEGNEVLDSSDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00242358; iTF_00243064; iTF_00243385;
- 90% Identity
- iTF_00242358; iTF_00243064; iTF_00243385;
- 80% Identity
- iTF_00242358;