Bput013051.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- bab2
- Assembly
- GCA_907164805.1
- Location
- OU015470.1:25526562-25535464[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-11 9.9e-09 35.7 0.0 1 38 333 371 333 376 0.90 2 4 2.1e-12 2e-09 37.9 0.1 1 39 387 425 387 428 0.95 3 4 1.6e-18 1.5e-15 57.5 0.0 1 45 442 487 442 487 0.97 4 4 2.4e-16 2.3e-13 50.5 0.1 2 42 495 536 494 537 0.96
Sequence Information
- Coding Sequence
- ATGATAGCATCGATGATGGCCGGCCAGCATTACTGTCTTCGTTGGAACAACTACCAGTCGAACATGACGTCTGTGTTTCATCACTTGTTGCGCACGGAGGCGTTCGTAGACGTCACCCTGGCCTGTAACGATATGTCGCTCAAGGCTCATAAGGTTGTGCTGTCGGCATGTTCGTCGTACTTCCAGAAGTTGTTGCTGGAGAACCCGTGCAAGCACCCGACCATCATAATGCCGCAGGACGTTTGCTTCAGCGACCTCAAGTTCATCATCGAGTTTGTTTATCGCGGCGAGATCGACGTATCGCAAGCAGAGCTGCAGTCGCTGCTGAAGACGGCCGACCAGCTGAAGATCAAGGGCCTGTGCGAGACGCGGGGCGACGCGGGCAGCGACCTCGACAGCCACCGCCGGGCGTTCACCAAGCTGCGCCGGCTGTCCGGGTCCAAGCGGCCGCGCCGGGCAGCCCAGGACGACGACGTGGACATCGACCTGACGGACCCCGTCGTCGTCCTCGAGACACGGGGTCAAGGTCACGCCCAGCACAACGGCAAGAGAAGCACGGTCGGCAACGGTCCCCCGCCCATAACCACCCCCCACCTGGTTGCCCTTGACTCCCACTCGACCAGTCACAGCTCGACCAATCACAGCTCGGACGTTGACATCCTGCCCGAGGCTCAGCCTCCCGCGCCAACCGCAACGCTGGTGGAGGTGGAGGACTTGGAGATGGGCGAGTGCGAGAGGACCGTGGCGTCGCAAGAGAACGTGGAACAAGAGATGGACAGCAATATCGTCAAGGTCAAGTTCGAAACGCTGCGCGCGATGGAACAAGACGCGATCGACGACGAGCACGACATGGAGGATAGGGACGACGAAGATGAAGACGATCACGCAATGCACACGATGATGATCACTCCGGAGCTCCTGGGACTCATTCCCACTTCATCCCTACATTCCGACATCTGCAGCGATCCCGGCAAGTCTGGCATCCCGAAGTCGTGGACCCAGGAGGACATGGAGCTGGCGCTGGACGCGCTGCGTAACCACGACATGAGCCTGACGAAGGCGTCCGCGACGTACGGGATCCCGTCCACGACGCTGTGGCAGCGCGCCCACCGCCTGGGCATCAACACGCCCAAGAAGGAGGGGCTGTCCAAGTCGTGGACCGAGGACATCCTCAACACCGCCCTGCAGGCTCTCAGGACCGGGACCATCTCCGCTAACAAGGCCAGCAAGGCGTACGGAATCCCGAGCAGTACGTTGTACAAGATAGCGCGGCGCGAGGGCATCCGGCTCGCGGCGCCGTTCAACGCAGCGCCCACCACCTGGAGCCCGGACGACCTTGAGCGGGCGCTGGAGTCCATCCGGTCCGGAGCCACGTCCGTTCAGCGGGCCGCCACGGAGTTCGGGATTCCCACCGGAACGCTCTACGGCCGGTGCAAGAGGGAAGGCATCGAGCTGTCTCGCAGTAACCCCACGCCGTGGTCCGAGGGAGCGATGGGCGAGGCGCTGGAGGCTGTTAGGATCGGCCACATGTCCATCAACCAGGCGGCCATCCACTACAACCTGCCCTACTCGTCGCTGTACGGCAGGTTCAAGAGAGGTGCGTACATGCCAGCACTGCTGCTAGTTGACTCGTCCAACGCTGGGTGA
- Protein Sequence
- MIASMMAGQHYCLRWNNYQSNMTSVFHHLLRTEAFVDVTLACNDMSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCETRGDAGSDLDSHRRAFTKLRRLSGSKRPRRAAQDDDVDIDLTDPVVVLETRGQGHAQHNGKRSTVGNGPPPITTPHLVALDSHSTSHSSTNHSSDVDILPEAQPPAPTATLVEVEDLEMGECERTVASQENVEQEMDSNIVKVKFETLRAMEQDAIDDEHDMEDRDDEDEDDHAMHTMMITPELLGLIPTSSLHSDICSDPGKSGIPKSWTQEDMELALDALRNHDMSLTKASATYGIPSTTLWQRAHRLGINTPKKEGLSKSWTEDILNTALQALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPDDLERALESIRSGATSVQRAATEFGIPTGTLYGRCKREGIELSRSNPTPWSEGAMGEALEAVRIGHMSINQAAIHYNLPYSSLYGRFKRGAYMPALLLVDSSNAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00243062;
- 90% Identity
- iTF_00242373;
- 80% Identity
- iTF_00242373;