Basic Information

Insect: Brachypalpus laphriformis
Gene Symbol: -
Assembly: GCA_945910015.1
Location: CAMDTZ010002551.1:33151-37122[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.047 19 7.9 0.1 3 23 238 259 236 259 0.93

2 9 0.0092 3.6 10.1 4.6 2 23 369 391 369 391 0.91

3 9 0.0019 0.74 12.3 0.7 2 23 468 490 467 490 0.94

4 9 0.007 2.8 10.5 0.3 2 23 745 767 744 767 0.96

5 9 0.00013 0.052 15.9 0.2 2 23 802 824 802 824 0.93

6 9 0.0067 2.7 10.5 3.6 2 23 877 899 876 899 0.96

7 9 0.066 26 7.4 4.2 2 23 913 935 912 935 0.92

8 9 5.3e-05 0.021 17.2 0.2 2 23 990 1012 990 1012 0.96

9 9 0.075 30 7.2 1.1 1 23 1084 1106 1084 1106 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.047	19	7.9	0.1	3	23	238	259	236	259	0.93
2	9	0.0092	3.6	10.1	4.6	2	23	369	391	369	391	0.91
3	9	0.0019	0.74	12.3	0.7	2	23	468	490	467	490	0.94
4	9	0.007	2.8	10.5	0.3	2	23	745	767	744	767	0.96
5	9	0.00013	0.052	15.9	0.2	2	23	802	824	802	824	0.93
6	9	0.0067	2.7	10.5	3.6	2	23	877	899	876	899	0.96
7	9	0.066	26	7.4	4.2	2	23	913	935	912	935	0.92
8	9	5.3e-05	0.021	17.2	0.2	2	23	990	1012	990	1012	0.96
9	9	0.075	30	7.2	1.1	1	23	1084	1106	1084	1106	0.98

Sequence Information

Coding Sequence: ATGGCTGCATCGATATATGCAACACCACCACCCGATTTGAGCAGCGAGGACACAGCACTTAGTGATGCATCGAATTCTTCCCAAATAAGTAATACAAGTTCCCAGCACAGTAGTTCCAAACACACCACATCATCGTCTACTACTGCTGGTGGAGGAGGAGGTGGAGAGGGAAGGATAAGCGGCGGAGGAGGAAGTAAAAAGCATCACAAACGTAGTATAGCCGGCGTTTTAATGGGCCATAACCAGGCGCTGATGGCACGTAACCTTACATCATCCTCCAGTTCGGCCTTGTTGGATGCCATGCAATTCGATCAATCGAAAAAAAGAAGAAAACAGTCAACGCCCATCCGGTTGGCGGCATTAAATCTTAGTGCCAATGGCGGCACCAAAGCAGTTGGCGAACTTACAGCGGAAATGTCCAGTCTAACGGGGGATGATGACGATGATGAGCATGAGCATGACAATGACAATGGGAATGTAAAAGAGGAACAGAATCCAGAAGATGACAGTCAAAATGAAGACTACGACGATAAGCTATCGAAGATATTTCTACCGAAACTTGTGGGTCAGCTGAACCCCTTTGATTTGCTACACAGAAACATATCACCACTGGGAAACTTCCAGGAACACAGAAAGACAAGATCTCCCGAACGGGAGGAGACTGAGAGACAGGAAAATCAGGACACCCTAACGAATTATTCACAGATATTCTGCAAGGAATGTGGTGAGAATTTTGACTCGGATCTGAGGCTGAGGGTGCACATTCTGCAAGAGCACTCAGTACATCGACAGCAAGAGGATGATAAGCGAAATGCGTCGAAGGAACAAAATACACTAGATATGCTTTCATCAGTCAAAGTGAAACTGGAGAGAAACGATGAAGAGGAGGCGACGTCCCCCATGCAAGACGGTCGAATGATGCAGAAACCTGACCAGTGGCTGTCTGCAATGCCCAGTCTGGGATTTCCATTCCCACCTGAGGCTGCAGCGGCAGCATTCTCCAGTGGGTATCTATCACAACTTCCACTCCTCGGAGTCCCACCAGCGTTTCCATCTGTTGAGGGACTCACCAGACCTCCACTGAGAATATTCAACCCGGAAGCTTACTGTGACCTTTGCAACAAGGAATTCTGCAACAAGTACTTCCTGAAGACACACAAGGCCAACAAACATGGAATATATGACCCCGCGTGCACCTCCACAGACTCTGGAATGACAAACGCTCCTCCAATGGGAACTATGACTCAAGTTTTCCACCttcaacttcaacagcagcaacaaatggagcaacaacaagctcaattccaggcacaacaacaccaacaccagcaacaacaacagcaacaacaacagcaacaacagcaacaacagcagcagATAGCTCCCCCCACTCCCATAATACCTTGTGACGTTTGCTCAAAGAAATTCACCAACATTTTCGCCATGAAGCGACATCGTACCAAGGCACACGAAGTACCACCGCCCACTGCCCAGAACCCCACCACCAACACAACCACTGCCACTGCTGCGGTTAGTACAAGTCCACATGAAATGAAATACGATCCGGAGACTACATCGATGGGACATTTGAATGAAAAGGATAACATGCTCGAGAAGGATACTTCTGCATCATCTTCATCGAATAATCTCCGTTTGCCAGAGGGATTCAGAGAAGACTTCTCTGTGGAACAAGAGGACGTATCCTTCACCCCACAGCCGCGCAAATTATCACCCTCCTCGCAGCAACAAGCACGCGATTCGAATTTCTCTTTCGATAAGCTGAAGCGCTTAGGGGTCATTAATCCCGAGGCATTCTGTGACCTATGCTGCAAGGAATACTGCAACAAGTACTTCCTGAGAACGCACAAGTGGAAGCGACATGGCATCTTTGTGCCACCAGATGACACCAAAGACGATATCAAAATGCAGTGGCCATTCTTTGCGATGCAAACAACCCCGCTGAATCTAATGATGGCCAATGAGAAACTGATGGAACGTAAGGCTCCCCTTCCTCCTCCACTAGAAGGTAAGGACTCAGCGAAGCGCTTAAAATTCAACTGCGATCCCAAGTCAATGAATGGCCAAAATGAAAAGAGTGACGAGCGCACAACATCCAGGGAATCACCCGAACAGATGGTACAAGCGAACGACCCAGAAGCAGTGGGGTTGAACCTCCAGAAGCTACAATCCATGATAATGCAGCTGAATGACTTGAATGGCAAACGACCGATACCTTGTCACATCTGCGGCAAGGAGATGGAGAATCAATACGTACTACATGCCCACATTGCCACCGAGCACTCGATTGACAACAACAATGGGAACAGCCTACCAATGCCACCGTACGTGGGGATGAAACTCTCGCCGTCATCATCTCCAGCAATGCCGACGATCCCAACCGAAGTGTGCAAGCAATGTGACAGGGAATTCTCAACTCTCTTCGAATTGAAGCAACATATCGCTGAGGCTCACTCTTTGCCCAGCCTCAGCAACAATAGTCCGCTACGGGAGGGCTTCGTCACTCCTGAGCGACCGATAAATACGAACTCCGGTGGAGCAACAACGCCAGGTGGGGGAAGCCAGGCCGATCGGGCAAGAGCTCCCTATACAATTACGCCCACAAGTAGTTACTGTGAGATCTGCAACAAGGAACTGTGCAACAAGTACTTCATGAAGACACATATGCAGCGGATGCACGGCATTGAGATTGAAAATGGCGCACAAATCGGTGGAGTCGTCTGCAACATCTGTAACAAGGAACTCTGTAGTAAGTATTTCCTGCGAGTGCACAAGCATAATACACACGGGATTGTCGATGAGGGATCGCCTCTCCCACAATCTCGACAGAGCAATGGCACAGAACAGCAAGAACAGCCAGATTTGGGAAGTAATTCTTTTCCCAACGATTCCAAAGTGGACATGGCGGGCGTGGACTTCAACACCAGATACTTCACTCACTATACTGAGGTCTGCCCGCTCTGTAGTCGTCGATTCCGCAGCGCCAAGTGGTTACGTGCCCACCTGATGAGCGATCATGGACCAGCGGGAGTAGACAAACTCCGCGAAATGGAGCAGCAACTTGGTGGTGGTTTCAGCAAACCCGCAAGTCCAACTTTAAAAATTCCCAACGGCAATAGTATGCCGCAGCAGAACCCTCTCAACAATATCAATCCCAATCTCCTGGTCAAGAATCCCTTTCCAGGACTCTTTGGTGCAGAGAATCCCCTGCAGTCGCCGCGTTTCAAAGAATACCAATGCTCACTTTGCTCATTCTCCACACCGTACTACGCGTTTCTGTTTATTCACGAAAGATCTCATTCGATTTTGAGCGGAACACCCTCCGTCGCAACTGTTGCACCCACTTCTCCTCCCGCTCCAATCAAATCCGAGTCGGCAGTCTCAATCGCCAAAGAGATTGCCACCGAAGTGAGCGTAAACAACCAACCGATAAGTTCTACTATCAAAACTGCTGTGTCCTCGTCGTCCTCGTCCTCGTCAACATCATCGGGAGGAACTCCGACAACGACGCCAGCCTCAACACCGGTACCGCAAACACCACAAGAAACAGCCAAACGAGACTCACCGGCGGGGGCCGCCGAAACAACTCAAGCAACTTCTGTACCCGCAACAGCAACAACATCTGCCATTACAACAACAACAACCTCAACAACATCATCATCAACATCATCATCACTATCACCATCGTCATACAATATTGATGTCAACATTTTACAGGAAGTCGCAAACAAGTCCAACCGACCGGTGGCCTATGCAGTGCCGCACGATCCAAACGGATCTGTCGTTGCAGCAGGTGAACTGATGCAGTCCTTTTTCGTTCAAGAGAACAACAACACCCCATCGTCAGAGGGTAACGATGGATCAAACAGGTTTGTCCCAGCTCTTATATATTTACCAGTTAGGGAACGCATCTCAGGTCCAATCACCGTGTCATTTACACTGACACCAGCATAA
Protein Sequence: MAASIYATPPPDLSSEDTALSDASNSSQISNTSSQHSSSKHTTSSSTTAGGGGGGEGRISGGGGSKKHHKRSIAGVLMGHNQALMARNLTSSSSSALLDAMQFDQSKKRRKQSTPIRLAALNLSANGGTKAVGELTAEMSSLTGDDDDDEHEHDNDNGNVKEEQNPEDDSQNEDYDDKLSKIFLPKLVGQLNPFDLLHRNISPLGNFQEHRKTRSPEREETERQENQDTLTNYSQIFCKECGENFDSDLRLRVHILQEHSVHRQQEDDKRNASKEQNTLDMLSSVKVKLERNDEEEATSPMQDGRMMQKPDQWLSAMPSLGFPFPPEAAAAAFSSGYLSQLPLLGVPPAFPSVEGLTRPPLRIFNPEAYCDLCNKEFCNKYFLKTHKANKHGIYDPACTSTDSGMTNAPPMGTMTQVFHLQLQQQQQMEQQQAQFQAQQHQHQQQQQQQQQQQQQQQQQIAPPTPIIPCDVCSKKFTNIFAMKRHRTKAHEVPPPTAQNPTTNTTTATAAVSTSPHEMKYDPETTSMGHLNEKDNMLEKDTSASSSSNNLRLPEGFREDFSVEQEDVSFTPQPRKLSPSSQQQARDSNFSFDKLKRLGVINPEAFCDLCCKEYCNKYFLRTHKWKRHGIFVPPDDTKDDIKMQWPFFAMQTTPLNLMMANEKLMERKAPLPPPLEGKDSAKRLKFNCDPKSMNGQNEKSDERTTSRESPEQMVQANDPEAVGLNLQKLQSMIMQLNDLNGKRPIPCHICGKEMENQYVLHAHIATEHSIDNNNGNSLPMPPYVGMKLSPSSSPAMPTIPTEVCKQCDREFSTLFELKQHIAEAHSLPSLSNNSPLREGFVTPERPINTNSGGATTPGGGSQADRARAPYTITPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIVDEGSPLPQSRQSNGTEQQEQPDLGSNSFPNDSKVDMAGVDFNTRYFTHYTEVCPLCSRRFRSAKWLRAHLMSDHGPAGVDKLREMEQQLGGGFSKPASPTLKIPNGNSMPQQNPLNNINPNLLVKNPFPGLFGAENPLQSPRFKEYQCSLCSFSTPYYAFLFIHERSHSILSGTPSVATVAPTSPPAPIKSESAVSIAKEIATEVSVNNQPISSTIKTAVSSSSSSSSTSSGGTPTTTPASTPVPQTPQETAKRDSPAGAAETTQATSVPATATTSAITTTTTSTTSSSTSSSLSPSSYNIDVNILQEVANKSNRPVAYAVPHDPNGSVVAAGELMQSFFVQENNNTPSSEGNDGSNRFVPALIYLPVRERISGPITVSFTLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542527;
90% Identity: iTF_01542527;
80% Identity: -