Blap016009.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- Lztr1_1
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010000489.1:33996-36494[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-13 1.4e-10 43.3 0.0 1 107 136 267 136 270 0.87 2 4 0.088 59 5.8 0.1 78 108 270 300 265 302 0.88 3 4 2.9e-20 1.9e-17 65.3 0.0 8 105 361 460 356 465 0.86 4 4 4.1 2.8e+03 0.4 0.0 72 100 459 487 455 495 0.82
Sequence Information
- Coding Sequence
- ATGTATATTTTTCCAGGTGTGCTTTCTTTAGTATCAACATTTGTTTATTTTAATTGTTGGCGACGAATATCGAACGAACACGTCCTTCGTGGTGCCTCAGCACCACCATCCCGCCGCTATGGTCACACAATGGTGCATCATGATAGATTTCTCTACGTATTCGGTGGCTCAGCTGATTCTACGTTACCCAATGACCTCCATTGCTACGATTTAGATTCTCAGGTGTGGTCCGTCATAGCGCCCGAACCGAACTCCGATGTCCCATCTGGGCGTGTATTCCATGCCTCAGCTGTCATTGCAGATGCAATGTACATCTTTGGAGGAACCGTTGATAATAGTGTACGCCGCGGGGATACTTATCGTTTTCAGTTTTCAAGTTACCCAAAATGCACCCTACGCGATGATTTCGGAAAATTTTTCAACGAGAAACAATTCTGTGACATTCAGTTTATTGTTGGCCCAGAGGCGATTAAAATTCAAGCTCACATAGCCTTTGTCGCTGCACGATCAAAGTTTCTACGAACCAAAATACTGGCTGCCCGAGGTGCCAGCAACGCAAATCTACAGAAGTTGATAGGAACAGCTGATGTGCCGTTTATCGATCGGCCCCTGCTGGAAGTACGCCTCCTAAATGCACCACCAGAAGCGTTCGAAATTATACTGAACTACATTTATACAGACCGAATCGATCTGAAGGATTCGTACAGCAAGAATATAGTCATTCTGATAACGGATATATACCAGCTAGCTGGACAGTTTCTAATGCCCCGACTGGCGCAAGGATGTATTCAGTATCTGGATTTTAAGACATCGAAGCAAAATGTGTTAGAGGCACTATACAATGCCGACAGGCATAAAATTCAAATTATCAAGGACCATTGCATGCAGTTTATCGTCAAAGATGAAAATTTCTCTGATGTTGTGATGTCAAGTGAATTCAGTGATTTGGATAAACCTCTTCTTGTGGAGATAATTAGAAAAAGATTAAATCCAAGCAAAGCAAATACGGACGCAAATCTTGAGAAGAATGTTGGAACTACACTCGAGAGTGACATGGCAGTTTTTCTGGAGTCATGCGGCAAAGATTTTTGTGACATAAATTTAGTTTTGGATGGTCAAGTTATTCCTGCACATAAATCAATTCTCTCAGCTCGGTGCTCGTACTTCCAGGGAATGTTTCGGTCGTTCATGCCACCAGATAACAACGTTAATATTCAAATTGGTGATGTATCTCCCTCACTTGAGTCGTTTAGCTCTCTACTTCGTTACATATACTATGGCGAAACGAAACTGCCCCCACAAGATGCTTTGTATTTATTTCAAGCCCCAAGTTTTTACGGTCTCTCCAACAATCGGTTGCATGCATTTTGCAAGTACTCTCTGGAACACAATATCACGTACGAAAATGTCCTGCAGACCTTGGAGGCGGCAGACTTTACCAAAATTGTCGACATCAAGGAGTATGCCTTGAAGTTAATCGTCAAAGAGTTTGCCACAGTTGCGCGTTTACCTAAAATGACGGGTCTAAGTCGAGATCTCCTGCTGGAAATTATTCGGGCTGTAGCCGATGCACATGGGGAGTTCTTAACGACAATTAGCATCAATACGGATCTTTGA
- Protein Sequence
- MYIFPGVLSLVSTFVYFNCWRRISNEHVLRGASAPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVIAPEPNSDVPSGRVFHASAVIADAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFFNEKQFCDIQFIVGPEAIKIQAHIAFVAARSKFLRTKILAARGASNANLQKLIGTADVPFIDRPLLEVRLLNAPPEAFEIILNYIYTDRIDLKDSYSKNIVILITDIYQLAGQFLMPRLAQGCIQYLDFKTSKQNVLEALYNADRHKIQIIKDHCMQFIVKDENFSDVVMSSEFSDLDKPLLVEIIRKRLNPSKANTDANLEKNVGTTLESDMAVFLESCGKDFCDINLVLDGQVIPAHKSILSARCSYFQGMFRSFMPPDNNVNIQIGDVSPSLESFSSLLRYIYYGETKLPPQDALYLFQAPSFYGLSNNRLHAFCKYSLEHNITYENVLQTLEAADFTKIVDIKEYALKLIVKEFATVARLPKMTGLSRDLLLEIIRAVADAHGEFLTTISINTDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00083036;
- 90% Identity
- iTF_00335154;
- 80% Identity
- -