Blap027613.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- sip1_2
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010000969.1:149577-150230[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-16 3.3e-11 45.3 2.2 213 275 1 57 1 57 0.95 2 2 0.018 6.4e+02 1.7 0.0 157 190 69 101 60 140 0.71
Sequence Information
- Coding Sequence
- ATGCAAGCCTATCTGCTCAAACACATTATTCCGAAGTTGCAAATGGCACTCAGCGAGATGGTCATCAATCCATTGCAGCAGGATTTAGAACTGTGGAATGAACTAATCCCACCACAACTGATGGGACAAATTCTTGATAAGTATTTTTTTCCCAAATGGATGCAAGTACTTGTCCTCTGGCTAAACCAGTCTCCCGACTTTGATCAAATTTCTCGGTGGTACACCGGATGGAAGACAGTTCTCGGAGATGATCTACTTAAGCAGCCAATGATCAAAGAACATCTCCGACGAGCAATTGAAATGATGCATCGGGCAACTGAAACAATAGCTGCACCACAGCACCGTGCTTCATCAACTGGTCCACCAGCGTTGACGGATCTACAAATTACACCTCCTAACCAGCTGGAGGTCAAGGAACTTGTTTCGCAGAAGTGTGCAGAACGTGGCATCATTTTTGCCCCAATGCCTGAACGCAGAGAATTTGGCAAGCAGGTCTATCGAGTTAGAAAACTATTTTGCTATATCGATCGTAATGTTGTTATGCTGAGATGGATGGATGGAACTGTATCTGGATAG
- Protein Sequence
- MQAYLLKHIIPKLQMALSEMVINPLQQDLELWNELIPPQLMGQILDKYFFPKWMQVLVLWLNQSPDFDQISRWYTGWKTVLGDDLLKQPMIKEHLRRAIEMMHRATETIAAPQHRASSTGPPALTDLQITPPNQLEVKELVSQKCAERGIIFAPMPERREFGKQVYRVRKLFCYIDRNVVMLRWMDGTVSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -