Blap024715.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- -
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010000836.1:184216-185593[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.3e-11 1e-07 33.5 0.0 1 38 54 92 54 97 0.89 2 4 2.9e-13 3.2e-10 41.5 0.1 2 39 109 146 108 149 0.94 3 4 8.7e-18 9.5e-15 56.0 0.0 1 45 163 208 163 208 0.98 4 4 4.1e-19 4.5e-16 60.2 0.0 1 42 215 257 215 260 0.96
Sequence Information
- Coding Sequence
- ATGTTTCCCTATTTAAATTTTCCAGATATATACTCAGATGCCAGCGAGGATTCATTGATGATTGCGAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAATTTGGACCAACCACATGATAAACAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAATATGAGTTTGACGAAAGCCTCTGTGACGTATGGTATCCCATCGACAACATTGTGGCAACGTGCCCATCGCATGGGCATTGAAACACCCAAAAAGGAGGGCGGTACCAAATCATGGAATGAAGATTCATTGAACAGCGCACTGGAGGCATTACGCACTGGTCAGATATCAGCAAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTGTATAAGATTGCACGACGTGAGGGTATACGGCTAGCGGCACCGTTTAATGCGGCGCCCACAACATGGACACCCGAAGATTTAGAACGTGCTCTGGAAGCTATTCGTGCTGGTCATACGTCCGTCCAAAAGGCCAGCTCTGAATTTGGTATACCAACAGGCACACTTTATGGTCGCTGTAAACGTGAGGGTATTGAGTTGTCTCGCTCAAATCCAACACCATGGTCAGAAGATGCTATGAATGAAGCATTAAATTCAGTCAGAGTTGGACAAATGTCTATCAATCAAGCGGCTATTCATTACAACCTTCCCTATAGTTCCCTGTATGGTCGCTTCAAACGCGGCAAATATGACATTGCTAATACGAGTGCATCGTCGATAAACAACACATCAGGCAACACAAGCGGAAGCATTGAAATAATCGAACATAGTCCAGAGAATTCGTTGCACATGTTTcagcaacaattccaatatagtccagcgccgcagtctaatcatcaaacacaacagcaacaacaacaacaacaacagcagcagcaacagcaacagcagcaacaacagcaacatcaacaacaccaacaacaaccacaacaacacatccatcaacacgttgtacacatccaacaacaacaaacaccacaacatcatcatcaacaacaacatatccaacaacaaGATGTTGTTACCTCAACAAGTCAGGTTCATACCCAAGCTGGACAAATCCAACAGATTTATCACCATCACAGCACCCCCGAGAGGAGTTGA
- Protein Sequence
- MFPYLNFPDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDKQGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDIANTSASSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQHQQHQQQPQQHIHQHVVHIQQQQTPQHHHQQQHIQQQDVVTSTSQVHTQAGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187977;
- 90% Identity
- iTF_00187977;
- 80% Identity
- -