Belo029357.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- -
- Assembly
- GCA_951217065.1
- Location
- OX578272.1:99073115-99079865[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.3e-11 8.7e-08 33.4 0.0 1 38 58 96 58 101 0.89 2 4 2.9e-13 2.8e-10 41.4 0.1 2 39 113 150 112 153 0.94 3 4 8.7e-18 8.1e-15 55.9 0.0 1 45 167 212 167 212 0.98 4 4 2e-19 1.9e-16 61.1 0.0 1 44 219 263 219 264 0.96
Sequence Information
- Coding Sequence
- atgtaTTTGTCAGGAAACACCAATTCATTGTTAATTTaTATATACTCAGATGCCAGTGAGGATTCATTGATGATTGCGAATGGTTCTCCACACGACAATAATGAGCCACACTATACAAATTTGGACCAACAGCAAGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGTTTGACGAAAGCCTCTGTGACGTATGGCATCCCATCGACGACATTGTGGCAACGTGCCCATCGCATGGGCATCGAAACACCCAAAAAAGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCATTAGAAGCATTAAGAACTGGTCAGATATCAGCTAATAAAGCCTCGAAGGCGTATGGAATTCCGTCCTCGACATTGTATAAAATCGCCCGCCGTGAGGGTATAAGATTAGCAGCACCATTTAATGCAGCGCCAACAACATGGACGCCCGAAGATTTGGAGCGTGCATTGGAAGCGATTCGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCAGAGTTTGGTATACCAACAGGCACACTTTATGGTCGCTGTAAGCGTGAAGGTATTGAGTTGTCCCGCTCTAATCCGACACCATGGTCGGAGGATGCCATGAATGAGGCATTGAATTCTGTTAGAGTGGGACAAATGTCTATTAATCAGGCGGCTATTCACTACAACCTTCCATACAGTTCCCTGTATGGGCGCTTCAAACGTGGCAAATATGATATTTCCAATACTAGTGCAACAATCAACAATACATCGGGTAACACGAGTGGAAGCATTGAAATTATCGAACATAGTCCAGAAAATTCGATGCACATATTTCAGCAACAGTTCCAATATAGTCCAGCGCCGCAGTCTAATCACCAgacccaacaacaacaacaacagcagcagcagcagcaacagcaacaacaacagcaacaacaacaacagcagcagcagcaacaacaacagcagcatcaACAACaccaaccacaacaacaacacatcCATCAACAAGTTGTACACATTCAACACCAACAAACCCCACAACAAcaccatcatcaacaacaacatatCCAACAACAAGATGTTGTTACCTCAACAAGTCAGGTTCATACCCAAGCTGGACAAATCCAACATATATATCACAGCACCCCTGAGAGGAGTTGA
- Protein Sequence
- MYLSGNTNSLLIYIYSDASEDSLMIANGSPHDNNEPHYTNLDQQQDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNTSATINNTSGNTSGSIEIIEHSPENSMHIFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQHQPQQQHIHQQVVHIQHQQTPQQHHHQQQHIQQQDVVTSTSQVHTQAGQIQHIYHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241372;
- 90% Identity
- iTF_00241372;
- 80% Identity
- -