Basic Information

Insect: Brachyopa scutellaris
Gene Symbol: -
Assembly: GCA_949775065.1
Location: OX459112.1:161338058-161347618[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4e-05 0.0095 17.9 2.1 1 23 412 434 412 434 0.96

2 18 1e-05 0.0025 19.7 0.4 1 23 440 462 440 462 0.97

3 18 2e-05 0.0047 18.8 0.5 1 23 468 490 468 490 0.98

4 18 1.7e-05 0.004 19.1 3.1 1 23 496 518 496 518 0.97

5 18 3.9e-05 0.0091 17.9 4.7 1 23 524 546 524 546 0.99

6 18 7.1e-05 0.017 17.1 5.7 1 23 552 574 552 574 0.97

7 18 2e-07 4.6e-05 25.2 4.3 1 23 580 602 580 602 0.98

8 18 1.2e-07 2.9e-05 25.8 2.4 1 23 608 630 608 630 0.97

9 18 0.00017 0.039 16.0 5.7 1 23 636 658 636 658 0.97

10 18 2.1e-05 0.0049 18.8 6.5 1 23 664 686 664 686 0.98

11 18 3.5e-06 0.00083 21.2 4.5 1 23 692 714 692 714 0.98

12 18 8.2e-06 0.0019 20.1 8.1 1 23 720 742 720 742 0.98

13 18 2e-06 0.00047 22.0 7.9 1 23 748 770 748 770 0.98

14 18 7.5e-07 0.00017 23.4 7.7 1 23 776 798 776 798 0.98

15 18 0.00023 0.055 15.5 9.5 1 23 804 827 804 827 0.95

16 18 0.0002 0.046 15.7 0.5 1 23 833 855 833 855 0.97

17 18 0.00088 0.21 13.7 4.4 1 23 865 887 865 887 0.98

18 18 7.3e-06 0.0017 20.2 1.7 1 23 893 916 893 916 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4e-05	0.0095	17.9	2.1	1	23	412	434	412	434	0.96
2	18	1e-05	0.0025	19.7	0.4	1	23	440	462	440	462	0.97
3	18	2e-05	0.0047	18.8	0.5	1	23	468	490	468	490	0.98
4	18	1.7e-05	0.004	19.1	3.1	1	23	496	518	496	518	0.97
5	18	3.9e-05	0.0091	17.9	4.7	1	23	524	546	524	546	0.99
6	18	7.1e-05	0.017	17.1	5.7	1	23	552	574	552	574	0.97
7	18	2e-07	4.6e-05	25.2	4.3	1	23	580	602	580	602	0.98
8	18	1.2e-07	2.9e-05	25.8	2.4	1	23	608	630	608	630	0.97
9	18	0.00017	0.039	16.0	5.7	1	23	636	658	636	658	0.97
10	18	2.1e-05	0.0049	18.8	6.5	1	23	664	686	664	686	0.98
11	18	3.5e-06	0.00083	21.2	4.5	1	23	692	714	692	714	0.98
12	18	8.2e-06	0.0019	20.1	8.1	1	23	720	742	720	742	0.98
13	18	2e-06	0.00047	22.0	7.9	1	23	748	770	748	770	0.98
14	18	7.5e-07	0.00017	23.4	7.7	1	23	776	798	776	798	0.98
15	18	0.00023	0.055	15.5	9.5	1	23	804	827	804	827	0.95
16	18	0.0002	0.046	15.7	0.5	1	23	833	855	833	855	0.97
17	18	0.00088	0.21	13.7	4.4	1	23	865	887	865	887	0.98
18	18	7.3e-06	0.0017	20.2	1.7	1	23	893	916	893	916	0.96

Sequence Information

Coding Sequence: ATGAATTCGGATCACACAGCAGCTCCTGGCGAGTCGTCATCAAATCCGAATGACTCTCAACAAAGTCGGCACTCACCGCAGCAGGcccagcagcaacaacagcagcagcagcaccatcaacatcaacagcagcagcaacaactcGCTCACCAGCGACATCCGCAACAATTAAACGAACTTGGAAAGTACTGGGTTGTTACGAATCTATTTCAGGGTCCAGGTCAGCCGCCATACAATATTGGTATAACACCAACAACATCAGCAGTTCCTACACTACCGCCTCCAATAACGTCTCATTCAAGTGCTTCAGTAACAAAATCAGGAAACtcgaaacaacaacaacaacaagagcAACTCGCACCTAACTCGCACACACAATCCCCAGCACATATAGTATCATCGGTCGGTCCAACGTCTTTACAAATACCCAATCCGATGATAACAAATGCATCAATGAATCAGCAGCAGCTTCCCAATGGCACAATAATTGCAGCGCCACGTCATCCGGACTCGATACACGTACATGGAACGATGTCCTCCGAGGATAATCGACACGTCTCACACGGTATGCAAGACATAAAGGAGGAGAAGCCTTTCGTAaatggtaaacaaaacaatcacaTGGCGCATGTCAATCCAGCATCTTCCATTTCGTCGAAAATGAATTCTGGCAGTGGTGGCAACAATGTACAATCTGCCGAATcaggcggtggtggtggtgggcaGATGGTTAGCAAACTACAAGCGGGCGGTGTTCCCGTTGGTGGCGGTGGCGGAGGCAATGAACAGCAAGAGCTGGTCAGTGGTAAACCACCACACGGTGTTGAAATGTACAAAGTCAATATTGAAGATTTGAGTCAATTTCTATCATATCATGAGGTCTTTGGCAAAATTCATGGCGAAGTAATAAATCAACAGCAAATATCATCGCATACGGTAACGCATCCTACTACGAATGTATCAACCTCAAATGCTGGTGGCAATACCTCCGTGAGTGGTACTGTTACTGGTTCACTACCTCCACCCCCGCCACCGTCGACTAACGGCAATTCGATAGTGACAACCAACAGCCTTACCAGTTCAGGGACTGGTGCACAAACAGTTCCACCGCCCGGTGGTCTCCCGACTGCATCCGGTGATCTGATTTTGCCTAAAATGGAGAATCAAGGGATGGGTGTTGATCAGAATACCCCTTTATTGGCACCCGATGGGACACCCATAATGGGCGGTACGCATATCTGTGACATTTGCGGCAAAATGTTCCAATTTCGCTATCAACTAATTGTACATCGTCGCTACCATAGTGAACGTAAGCCATTCAATTGCCAGGTATGCGGACAGGGATTCACAACGTCGCAAGATCTCACTCGCCACGGTAAGATCCATATTGGAGGGCCAATGTTCACCTGTGTCATTTGCTTCAATGTGTTCGCCAACAACGCCAGCCTGGAGCGGCATATGAAACGTCACTCAACCGACAAGCCATTCGCGTGCACCATATGCCAGAAGACATTTGCCCGCAAAGAGCACTTGGACAACCACTTTCGCAGTCATACCGGCGAGACGCCATTCCGTTGCCAGTATTGTGCGAAAACGTTTACACGAAAGGAACACATGGTGAATCATGTGCGCAAGCATACCGGAGAGACGCCGCATCGTTGCGATATTTGTAAGAAATCTTTTACGCGGAAAGAGCACTATGTAAACCATTACATGTGGCACACAGGTCAGACGCCGCATCAATGTGACATATGTGGGAAGAAGTACACACGGAAGGAGCACCTAGCCAATCACATGCGATCCCATACGAACGATACACCATTCCGGTGTGAAATATGTGGCAAGAGTTTTAGCAGAAAAGAACACTTTACCAATCATATTTTATGGCATACAGGAGAAACCCCTCATCGCTGTGATTTCTGTGCGAAGACGTTCACCAGGAAGGAGCACCTATTGAACCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAGACCCCCTTCAAGTGCACCTACTGTACCAAGGCGTTTACTCGAAAGGATCATATGGTTAATCACATCCGTCAACACACCGGGGAGTCACCGCATAAATGCACCTACTGCACGAAAACCTTCACGAGGAAAGAGCATTTGACCAATCATGTGCGCCAACATACGGGTGAGTCGCCTCATCGTTGCACCTActgcaaaaaaacatttacacGCAAGGAACACCTAACAAATCACATCCGGTTGCATACAGGCGATTCGCCCCACAAATGCGAATACTGCCAAAAGACGTTCACACGCAAGGAACACTTGAACAACCACATGCGGCAGCACTCTAGTGACAACCCACACTGCTGTAATGTGTGCAACAAGCCTTTCACACGCAAGGAGCATTTGATCAATCATATGTCGCGCTGTCATACTGGGGATCGACCATTCGCATGTGAGACATGCGGCAAAAGTTTCCCGCTGAAAGGCAACTTGCTTTTCCATCAGCGCAGTCACACCAAGGGCCAAGAGTGTGAGCGTCCATTTTCGTGTGAGAAGTGTCCCAAGAACTTCATTTGCAAAGGTCATCTTGTATCACATATGCGTTCGCATTCGGGTGAGAAACCACATGCGTGCACTATGTGTAGTAAGGCATTCGTAGAAAGAGGGAATCTCAAGCGTCACATGAAAATGAATCATCCTGATGCTGTAATGCCACCTCCTCCGACACCGATTCCGGGTATTTTAACACAAATCAAACAGGAGATCAATCCAATAATAATTCCTCATCAGCCTCCAACAATGCACACAATACAGCAAATCACTTCAACTGCAGGCAGCTCAAGTGCAAATAATCCAGTAAATCCGGCTCTTCTGACGCCCGGTCTGGTACCAATGGTAACGTCTacaataacttcacatattaGTCAAAAGCAGCAATCCcatcaacagcaacagcagcagcaacaccaACATCAACAGCAACTGCAGCAGCAACAGCTTTTACAGCTCTCCATTCAGCAGGCAGCTCAGCATCAGCAGGCTGAGCATAGACAGCAACAGCAAgtacagcaacagcaacaacatcagcagcaacaacaaacccatcaacaacatcaacagcaacagcagcagcagcaacaacaacaacagcagcaacagcagcagcaacaacaacagcaacaacaatcACAGCATCAACAACCACAACCGCCATCAGTGCCGATAGCTCTAATTGGACCAGATCCCTCAGCGATAGCACGCGCTGCTATGCAATTACAACATTTGCCAACCAACGTCGAACAACATCCCGTGGTGTACTAA
Protein Sequence: MNSDHTAAPGESSSNPNDSQQSRHSPQQAQQQQQQQQHHQHQQQQQQLAHQRHPQQLNELGKYWVVTNLFQGPGQPPYNIGITPTTSAVPTLPPPITSHSSASVTKSGNSKQQQQQEQLAPNSHTQSPAHIVSSVGPTSLQIPNPMITNASMNQQQLPNGTIIAAPRHPDSIHVHGTMSSEDNRHVSHGMQDIKEEKPFVNGKQNNHMAHVNPASSISSKMNSGSGGNNVQSAESGGGGGGQMVSKLQAGGVPVGGGGGGNEQQELVSGKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISSHTVTHPTTNVSTSNAGGNTSVSGTVTGSLPPPPPPSTNGNSIVTTNSLTSSGTGAQTVPPPGGLPTASGDLILPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPIPGILTQIKQEINPIIIPHQPPTMHTIQQITSTAGSSSANNPVNPALLTPGLVPMVTSTITSHISQKQQSHQQQQQQQHQHQQQLQQQQLLQLSIQQAAQHQQAEHRQQQQVQQQQQHQQQQQTHQQHQQQQQQQQQQQQQQQQQQQQQQQQSQHQQPQPPSVPIALIGPDPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00991990;
80% Identity: -