Bscu050203.1
Basic Information
- Insect
- Brachyopa scutellaris
- Gene Symbol
- -
- Assembly
- GCA_949775065.1
- Location
- OX459116.1:11073612-11075460[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-08 5.9e-05 24.3 0.0 2 40 15 53 14 56 0.89
Sequence Information
- Coding Sequence
- ATGCCTCGCAGCAAGGAAGGTGTTAAAAGAACTCCTTTGGATGAAAATGCCTTACAGGAAGCTATCAACGATGTTCTCTACAATAAGGAAACAATCGGCAGAGCTGCAAAAGACCACGGTATTTCCAAAACAACTTTGTTTCGTCATCTTCAAATGCATCGGAAATCTGGCGATGCAACGTTCAAATACCATTCAGAAATTGCACACAAAAAAGTGCTTAATGATGAAGAAGAACTTGCCTTGGTTGAATACCTTACCACAGCAGCAAAGCTGCAGTATGGATTATCGAAAATTGATACAACCAAATTGGCCTTTAGTTTTGCAAAAGCAAATGGAAAAATTCTTCCGGAGTCGTGGATAAAGAACGAAGCAGCTGGCAAAGAGTGGATGATTAGCTTTCTTAAACGGCATCAAACTTTATCACTCAGAAAGCCAGAGTCGACCAGCCTTTCCAGATTAACCAATTGCTATTCCCGTTTTAAATTTAACCCAAGTAGAATTTACAATCTTGACGAAACTGGAAATTCAACGGTTCACGTCCCACCGAAAGTTTTAGCTGCCAAAGGTGAAAAACAAATAGGAAGCATGACCTCGGGAGAAAGAGGAATAAATGTCACTATGGTCGCTGCTATTAATGCAATAGGAAATCATGTTCCGCCGATGTTGATATTCCCCAGAGTTCATTTCAAGGAACATATGCTTAACGGTGCTCCAGCAGGGTGTATTGGTGGTGCTAATCCTTCCGGCTGGTCAAACGAGCAACTGTTTATTGAGTTCTTCGTACATTTTATAGCACATTCAAAGCCAACACCAGATGAAAAAGTTTTGCTTATAATGGACAACCATGATAGCCACATATCTCTGCAGGCCATTGATCTCGCCAGAAAACATGGAGTTGTTCTTTTGACTCTGCCGCCGCATACTTCCCACAAAATGCAGCCTCTGGATAGAACGGTATTTGGACCGTACAAAACTTACTACAACAAAGCCGCAAGTGAATGGATGCTGAACAACCCAGGAAAACCAATGTCAATTTACAATGTAGCACAAATTGTCGGCCAGGCTTATCCGAAAGCATTCAATCAGCAAAACATCGTTAAAGGACTTGAAGTAACAGGAATATATCCCTTCAATCATGATATTTTCAACGAAGATGAATTCCTTAGTAGCTTCGTAACGGATCGACCATGTCCTGAAAAACCAGCTGCTATGCCCACCGAAAATGCAAATGACCTTATAATTGCAGATGAACAAAGACCAGGAACATCCACAGCGACCTCTGCAGTATTGGTTCCTTCGATAAATTTCGTATCACCAGAGCAAATAAGGCCATTTCCAAAAGCTGCACCAAGAAAGGATCCTATTGCACGTGGAAGAAAGAGGGGAAGAACTAGGATTCTTACGGACACTCCTGAGAAGAAAGAAATTGCTACAGGAAGCTCGAAAGTCAAGACCACTAAAAAGCCAAATTCAGCGAAGAAAAAAGTTTTGAACGAGTCCTCAGACGATGCTCAGATACGAAAGAATGATTTTGGGCTGGAAAACACAAATCCGAAGTCCCTTTGTCAGAAAAAATTTAACTGGAAGCACCTGGTGAAAAAGATGAAAGACCGTCTGTAG
- Protein Sequence
- MPRSKEGVKRTPLDENALQEAINDVLYNKETIGRAAKDHGISKTTLFRHLQMHRKSGDATFKYHSEIAHKKVLNDEEELALVEYLTTAAKLQYGLSKIDTTKLAFSFAKANGKILPESWIKNEAAGKEWMISFLKRHQTLSLRKPESTSLSRLTNCYSRFKFNPSRIYNLDETGNSTVHVPPKVLAAKGEKQIGSMTSGERGINVTMVAAINAIGNHVPPMLIFPRVHFKEHMLNGAPAGCIGGANPSGWSNEQLFIEFFVHFIAHSKPTPDEKVLLIMDNHDSHISLQAIDLARKHGVVLLTLPPHTSHKMQPLDRTVFGPYKTYYNKAASEWMLNNPGKPMSIYNVAQIVGQAYPKAFNQQNIVKGLEVTGIYPFNHDIFNEDEFLSSFVTDRPCPEKPAAMPTENANDLIIADEQRPGTSTATSAVLVPSINFVSPEQIRPFPKAAPRKDPIARGRKRGRTRILTDTPEKKEIATGSSKVKTTKKPNSAKKKVLNESSDDAQIRKNDFGLENTNPKSLCQKKFNWKHLVKKMKDRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00240646; iTF_01520963; iTF_01520964; iTF_01520966; iTF_00240652; iTF_00724717; iTF_00724720; iTF_00724726;
- 90% Identity
- iTF_00724720;
- 80% Identity
- -