Bvim045475.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachylomia viminalis
Gene Symbol
Hr39
Assembly
GCA_937001565.2
Location
CAKZJP020000705.1:563534-586766[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.073 1e+03 0.4 3.1 70 186 220 335 137 365 0.58
2 3 4.7e-08 0.00066 20.8 0.1 1 22 444 465 444 487 0.87
3 3 7.6e-65 1.1e-60 207.9 0.0 152 408 497 763 467 763 0.85

Sequence Information

Coding Sequence
ATGGTGATGAGCACCGCGATGAGCAGTGAGGGCGACGCGGTGAAGGTGGAGGGGGGACACGTTTCTGTCACCACTATCAGCATGTCAGGCCCGGAGACTAGCAACGGTCAGTTCTCGTACAGCTCGAGCGGCGTGCGCATCAGTGTGTCTTCAGTGCCTCATGATGAAGACTCCACTGACGCCGAGATCTCCAAAATCGACTTCTCACAACATCAGTACGAGGTGAACATGCGAAACAAGAAGAAGCGATCATTGGGCGGCGCGCACGAGATAGCCAGCAATGAGCGTGAACGACCCATGTCGTGGGAGGGCGAGCTGTCAGACTCCGAGATGGTCATAGACACCAGTGTTAATAATGACGAGACCAACAGCTCCCTAGACCTGCAGTCATCAAGGGACTCAATCGACACGCTCCGCAATGTGTGCATCAAGACGGAACCCGTCAAAACGGAGGGTTTCCAGAACGTGGATGAGCAGAGAGTGCTGGACCTAAAGTATAGTGCGCCGCTGCAACCGCATCAAAGGAGTCTTAGTATGAACAGGATATCAGTGCTAACAGACGGCCCATCCCTCTCTTTAGCAAGACGGCCGTCCTCTCCGACCAGTAGTGCCAAGTCCCTCGCGCTCAGCGACCAGGGCTCAACTCACATGCCACATACCGGATTAGATCAAGTGCAAAACTTGACCATCAAGAAGGAAACGCAGTTATCTGaGTTAAAATGCGAGCAGTCAGTTGGTATGGACAAGCTGATCGGCGCGCTGCACGGCTCCCCACTCCTGGGCCGACTGCCGCGCGTGCAGTCCAGTGCCAGCACAGACTCTGCAGTACACTCCATGTATACACACAGTGTATACAGCAGTCCTTCAGCGAGTCCCCGCGCGTCCCGCCACTACACACCCTCGTTGTCTCGCAACAACAGCGACGCGTCACATTCCTCTTGCTATTCTTATAGCTCCGAGTTCTCGCCCACACACTCGCCAGTACAGGGTCGTCACCCTCACGTCATGTACCGCGAGGCAGCGGCAGTGTACGACGGCCCACACGACGACGAGCCCGACGCGCCTGAAGACAGGCTCCATCACCACCAGGGTATTAGCAGACAACAACTTATCAACAGTCCATGTCCAATTTGCGGCGACAAGATCAGCGGCTTCCACTACGGCATCTTCTCGTGCGAGTCCTGCAAGGGTTTCTTCAAGCGAACAGTGCAGAACCGCAAGAACTACATGTGCTTGAGGGGGGGCAACTGTCCCGTCACTGTGACTACCAGGAAGAAGTGTCCAGCATGTAGATTTGATAAGTGTCTGGGATGCGGGATGAAGCTTGAAGCTATACGAGAGGATAGAACTCGAGGCGGCCGCTCCACGTACCAGTGCTCGTACACGCTGTCGGGCGCGGCGTCCACGGGCTCGCTGCTGTCTGCGCACGCGCCCGCCACGCTGCGCCACGCCTCCAGCCTCACTTGTGTAAATGGTCCCGGCTCTTACAGCAGCAGAGGGGAGTCCAGTAACAGCCAAGTTACACCGGATATACCGCCTTTATTACAGGAAATAATGGATGTGGAACATCTGTGGCAGTACAACGAGTCGGAACTGAGCAGGCTAGGCAAGTCCACCGGAGGCAGTCCTTCTGCCAACCCCCTGCTAGCTGCGAGCGGGATCACGGCACATAACTCTAGCCCTGACTTCCTGGCTGACCTGTGCAATATAGCTGACCATAGACTGTACAAGATTGTGAAGTGGTGCAAGAGTTTGCCGCTTTTTAAGAATATTTCGATCGACGACCAGATCTGTCTGCTGATCAACAGCTGGTGCGAACTCCTAGTACTGTCATGTTGCTATCGCGGCGTGAGTACTCCGGGAGAAGTGCGAGTTGGAGGAGGACGTGGCATCACGCTGCATCAAAGTGCTAAACTGGGCCTGACGCCGTGTATCGAGCGCATGCTCAGCTTCACGGACCATCTGCGGAGGCTGCGCGTGGACCGATACGAATATGTGGCGCTCAAAGTTATTGTACTACTCACTTCAGACGCCCCAGATTTACGTGAAGTTGAGAAAGTACGAGCTTCTCAAGAGAAGGCGCTGGCAGCTCTACAGGAGTACATCGCGACACACTCCCCTGGCACTCCAGCCAAGTTTGGGGAACTGCTGCTGCGTATACCTGAACTGCAGAGGACTTGTCAGTTCTTCATGCAAGTCGGCAAAGAAATGCTGAACCCAGCCAACAAAAGCAAAGATGGCGACGGACCAAGTTTCAACTTACTCATGGAACTGTTGCGCGGCGACCATTGA
Protein Sequence
MVMSTAMSSEGDAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSVPHDEDSTDAEISKIDFSQHQYEVNMRNKKKRSLGGAHEIASNERERPMSWEGELSDSEMVIDTSVNNDETNSSLDLQSSRDSIDTLRNVCIKTEPVKTEGFQNVDEQRVLDLKYSAPLQPHQRSLSMNRISVLTDGPSLSLARRPSSPTSSAKSLALSDQGSTHMPHTGLDQVQNLTIKKETQLSELKCEQSVGMDKLIGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVMYREAAAVYDGPHDDEPDAPEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVTTRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPATLRHASSLTCVNGPGSYSSRGESSNSQVTPDIPPLLQEIMDVEHLWQYNESELSRLGKSTGGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLREVEKVRASQEKALAALQEYIATHSPGTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00042698;
90% Identity
iTF_01076559;
80% Identity
iTF_00237867;