Bvim044305.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachylomia viminalis
Gene Symbol
lrrfip2
Assembly
GCA_937001565.2
Location
CAKZJP020000660.1:17485-53320[+]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 6.6e-68 1.2e-63 216.8 13.1 1 222 122 344 122 348 0.94
2 13 3.3e-16 6.1e-12 47.1 5.4 198 297 352 443 345 445 0.82
3 13 3 5.6e+04 -53.4 66.7 1 256 442 720 442 864 0.75
4 13 3 5.6e+04 -46.7 54.7 107 238 893 989 745 1115 0.44
5 13 3 5.6e+04 -33.6 40.5 106 237 1060 1198 955 1244 0.43
6 13 3 5.6e+04 -28.6 34.1 128 239 1208 1326 1163 1403 0.48
7 13 3 5.6e+04 -29.4 43.5 11 261 1334 1579 1330 1595 0.65
8 13 3 5.6e+04 -33.0 40.1 108 238 1664 1801 1563 1844 0.54
9 13 3 5.6e+04 -46.7 54.5 106 161 1914 1969 1726 2096 0.44
10 13 3 5.6e+04 -39.4 47.0 108 238 1958 2095 1851 2182 0.41
11 13 3 5.6e+04 -52.8 61.2 109 238 2085 2179 1935 2348 0.46
12 13 3 5.6e+04 -40.7 48.3 108 238 2210 2347 2103 2433 0.41
13 13 3 5.6e+04 -13.1 20.6 12 166 2357 2499 2351 2508 0.52

Sequence Information

Coding Sequence
ATGGGACAGCGCTCTGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGTGGGGACGCCTTCACTGACGGAGATTTTGGTGATTCCGATGATGAGACGATCGTTGAACGCCTTGATGAAGCCAAACCTGCTCACATACCAATCAATGAAGCTGTAAAAGATGATATTCAGAAGAGTGCGGCTACTAATGGTCACTCTAATGGTAGTGCAGATGAGCAGCCCAAAATGAATGGCCGTAAAAATAGTGAAGCTCATTCGAGTGATATGGAAAACCAAAACTTAGTATTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCAGCGCGGGCTGAAGCGCGAGAAATACGCATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCGTACGATATGTATGCCGGCAAGACACCAGAGACGGTGGGTCGTCGCGGGGTGACGAGGCTAACGGCGCTCAGCCCCGCCGTGCACTCACCAAGACGAAGCTCGGAAGACTCCGTTGATGATGGCTTCAGCATCAAGGATCTTAGGCATGAGTTGAAGGAGGTGGAGGAGAAGTTCCGAAAGGCGATGATCCTTAACGCGCAGCTGGACAATGACAAGGCGGCGCTCGGCTATCAGTTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAGAGAAAAATGCTCATCATTTGAGCGTCTAAAGCGGGAACACGAGTCCGTATCTCGCGAGCTGAGCGCAGCGCGAGATGCGGTGCGAGCACGAGACGCGGCGGCAGCGGGCGCGGGCTTCGCCTTCGTGGACGCGGCGGCGCTGGATGCGGCGGCGCGAGACACTGCGGGGGCCGCGGTCGGGGCCGTGCCCGCGCTCGCGTTGGTGACGCACCAGGCGCAGCAGCTGCTCAACGATGCCGGGGAGGGCACGCTTGACACTGCGGGGGCCGCGGTCGGGGCCGTGCCCGCGCTCGCGTTGGTGACGCACCAGGCGCAGCAGCTGCTCAACGATGCCGGGGAGGGCACGCTTGACGTGCGGTTGCAAAAGCTGTTAAGCTCGAAGCAGGCGCTGGAGTCAGAAGTACGCAAGTTGAAACTACAGCTGAACGAAGAACGCGCCGCGAGACAGAACGGAGTCAGCAACCACCACGACCAAGAGTACGAGAATGAACTGGAAACGGTCCGGAAGGCGGTGTCGGACGCGAAGGGTCGCGCGGCGCGCGCCGAGGCCGAAGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGACGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGACGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGACGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGTACCATCACACCCTACATACGTGGCGCGCCTGGAGGCGCAGCTCGCGCGGCACCGCGCGCGCCAGGGCCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGACGCAAGCTGCAGAGAGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAATTAGAAACTGAGAACAGCCACCTCACAAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCACTCCTCAAAGACCTGTGA
Protein Sequence
MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPINEAVKDDIQKSAATNGHSNGSADEQPKMNGRKNSEAHSSDMENQNLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGVTRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVSRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARDTAGAAVGAVPALALVTHQAQQLLNDAGEGTLDTAGAAVGAVPALALVTHQAQQLLNDAGEGTLDVRLQKLLSSKQALESEVRKLKLQLNEERAARQNGVSNHHDQEYENELETVRKAVSDAKGRAARAEAEAALQAAHVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQRELARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVTRLEAQLARHRARQGHQDEHEEQLKQERRKLQRELARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVTRLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVTRLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREVPSHPTYVARLEAQLARHRARQGHQDEHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-