Bvim031715.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachylomia viminalis
Gene Symbol
sip1
Assembly
GCA_937001565.2
Location
CAKZJP020000374.1:900028-929976[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.2e-51 3.2e-47 163.0 1.4 1 230 365 576 365 584 0.96
2 18 0.041 1.1e+03 0.5 0.0 213 230 622 639 617 646 0.81
3 18 0.041 1.1e+03 0.5 0.0 213 230 685 702 680 709 0.81
4 18 0.041 1.1e+03 0.5 0.0 213 230 748 765 743 772 0.81
5 18 0.041 1.1e+03 0.5 0.0 213 230 811 828 806 835 0.81
6 18 0.041 1.1e+03 0.5 0.0 213 230 874 891 869 898 0.81
7 18 0.041 1.1e+03 0.5 0.0 213 230 937 954 932 961 0.81
8 18 0.041 1.1e+03 0.5 0.0 213 230 1000 1017 995 1024 0.81
9 18 0.041 1.1e+03 0.5 0.0 213 230 1063 1080 1058 1087 0.81
10 18 0.041 1.1e+03 0.5 0.0 213 230 1126 1143 1121 1150 0.81
11 18 0.041 1.1e+03 0.5 0.0 213 230 1189 1206 1184 1213 0.81
12 18 0.041 1.1e+03 0.5 0.0 213 230 1252 1269 1247 1276 0.81
13 18 0.041 1.1e+03 0.5 0.0 213 230 1315 1332 1310 1339 0.81
14 18 0.041 1.1e+03 0.5 0.0 213 230 1378 1395 1373 1402 0.81
15 18 0.041 1.1e+03 0.5 0.0 213 230 1441 1458 1436 1465 0.81
16 18 0.041 1.1e+03 0.5 0.0 213 230 1504 1521 1499 1528 0.81
17 18 0.041 1.1e+03 0.5 0.0 213 230 1567 1584 1562 1591 0.81
18 18 3.1e-08 0.00087 20.6 0.0 213 275 1630 1692 1625 1692 0.94

Sequence Information

Coding Sequence
ATGTCGGACGACGAAGTAATGCGGTTTGAAATCACCGACTATGATTTGGACAATGAATTCAACCCAAACAGAACCCGAAAAGCTAAAAAAGAGCACCAGATTTACGGTGTTTGGGCCAAGGACAGTGACGAGGAGGATAATGAAGACAATGTCAGACAAAGGTCTCGCAAACCCAAAGACTTCACGGCACCCATTGGGTTTGTGGCCGGTGGCGTACAACAGGCTGGCAAGAAGAAGGAGGAAAGTAAAGAAATAGAATCATCAGAAGCTTCAACGTCTCGTCCAAAGTTCGCTGACAGCTCTGATGAAGATGAACAGAATGCGCCGGATGCTAGTGAGACTGCTGGCATTAGAAGACAGGGGCAAGGCATGAAGCCGGTCAACCTTGGAGGCAATGTGGGGAATTGGGAGAAGCATACTAAGGGTATTGGAGCTAAGCTGCTGTTGAAGATGGGTTACCAACCAGGTATGGGTCTAGGTAAAGATCTGCAGGGTATCTCAGCACCCGTTGAGGCCACTGTCAGGAGAGGAAGGGGTGCTATTGGTGCCTATGGACCTGAAAAAGCAGCTCAAAAAGCCAAAAAAGAAGAGGAACTCCGTCGTCTGAAAGAGAAGGgagatgaaaaagatacaaaagaAAAGAACTACAATTGGAAGAAGTCGCACAAAGGTCGCTACTTCTACCGAGATGCCGCAGACGTCATACAAGAGGGTAAACCTACGATGCATACTATCACCAGCAACGAGCTCTCCCGTGTGCCTGTAATTGATATGACAGGCAAGGAGAAGCGTGTGCTGAGTGGCTACCACGCGCTTAGAGCCGCTGCACCGCGCTTCGAACACGAGCCGCGACGCAAGTGTGACAACTTTGCCGCGCCACAGCTGGTGCACAACCTTGAACTGATGGTGGAATGCTGTGAACAGGACATAATTCAAAACGCCCGCGAGCTTCAAACAGCGGAAGACGAGATAGTTGTCCTAGAGAGGGACCTAGAGGAATGCAACATAAAGCTGTCGGAACAAGACAAGGTGATTTGCAAGGTGGAAGGTATACTCGAGCGTGTGGAGATGCTCAACAAGCCAGAGGTGTCTTTAGAAAGGGCCCACGATGTGCTGGCTGAGTTGCAGGACACCTACTCTGTAGAATACGAGGTGTTCGGCCTGGGCACCATAGCTGGTAACATAGTGAGCCCGCTGCTAAGTTCCTTACTCGCTACCTGGGAACCCCTCGCGGCCCCTGACGAGCACATACCCACCTTCCTGAAATGGAGGAAGTTGCTGACAGAAGAGGCGTACAACAGTCTACTGTGGCAACACTTTGTGCCGCGACTTACTGCGGCTGCTGAAACCTGGAACCCCCGCATGCCAACACCCATGCTCCGCGCAGTATCCGCATGGCAGGCCGCCTCCCCCCCCTGGCTGTCGCGGGCATGCGTCACACGCTGCGTGGTACCGCGAGTGCTAGCGGCCGTGAGGGCCTGGGACCCCACCAACGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCATGATATGGCAGGAGAAGCCCTGGCCGGCTCGGTGTACCCGCTCATCCGCTCGCGCCTGGCGGCGGCGCTGGCGGCGTGGCACCCGGCGGACGGCTCGGCGCGCGGCGTGCTGCGCGCGTGGCGCGGCGCGTGGGGCGCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACAGTACGTAGCCCGCACTCACACTCTTAGGCTGAGTCGTCGATCTGAACACCCGGCGGACGGCTCGGCGCTGCACGCGCTGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCACGCGCCGCTGGAGCTCGTGGGCAGGGAGAACACGGCCTGGCTATGGTGCGTAGAATGGCTGGAGCTCCTCGGGGCCCCGACAGTAGCGGCCATCGCGGCGCGTGCGCTGCTCCCTCGCTGGCTGGCCGCGCTCGCTGCGTGGCTCAACACCAACCCGCCGCATGCTACTGTGCTTAACTCTTACACGGACTTTAAGAAAATGTTCCCGGAAGAAGTCCTCAAAGAGCCCGCTGTACGAGACGCCTTCCGCAAAGCCTTAGACATGATGAATCGAAGCGCAGACATCGACTCAGTGGAACCTCCCCCGCCACCGCGCTACACCATGCCCGAGCTGAAGGAAACTTCCCGTATCGTAGAAGTTTTAACATCCGTCACACAAGCTAAAAGCTTCTCAGAATTACTTGAATGTAGATGTATCGAAAAAGGGATCACGTTCGTACCTATAGCGGGCAAAACTAGGGAAGGTAGACCGCTGTATAAAATTGGCGATCTGCAGTGTTATGTTATAAGAAATGTGATCATGTTTTCCAATGATAGTGGTAGGAGTTTCAACCCTATTAGTATGGATAAGTTGTTGAATATGGTTGAGGATtga
Protein Sequence
MSDDEVMRFEITDYDLDNEFNPNRTRKAKKEHQIYGVWAKDSDEEDNEDNVRQRSRKPKDFTAPIGFVAGGVQQAGKKKEESKEIESSEASTSRPKFADSSDEDEQNAPDASETAGIRRQGQGMKPVNLGGNVGNWEKHTKGIGAKLLLKMGYQPGMGLGKDLQGISAPVEATVRRGRGAIGAYGPEKAAQKAKKEEELRRLKEKGDEKDTKEKNYNWKKSHKGRYFYRDAADVIQEGKPTMHTITSNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCDNFAAPQLVHNLELMVECCEQDIIQNARELQTAEDEIVVLERDLEECNIKLSEQDKVICKVEGILERVEMLNKPEVSLERAHDVLAELQDTYSVEYEVFGLGTIAGNIVSPLLSSLLATWEPLAAPDEHIPTFLKWRKLLTEEAYNSLLWQHFVPRLTAAAETWNPRMPTPMLRAVSAWQAASPPWLSRACVTRCVVPRVLAAVRAWDPTNDTQPLHQWVLPWHDMAGEALAGSVYPLIRSRLAAALAAWHPADGSARGVLRAWRGAWGAALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTRAAGARGQGEQYVARTHTLRLSRRSEHPADGSALHALLHQHIVPKLDHCLQHAPLELVGRENTAWLWCVEWLELLGAPTVAAIAARALLPRWLAALAAWLNTNPPHATVLNSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSADIDSVEPPPPPRYTMPELKETSRIVEVLTSVTQAKSFSELLECRCIEKGITFVPIAGKTREGRPLYKIGDLQCYVIRNVIMFSNDSGRSFNPISMDKLLNMVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-