Basic Information

Insect: Bombyx mori
Gene Symbol: znf711
Assembly: GCA_027497135.1
Location: CP114963.1:804558-807303[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00056 0.031 14.8 2.1 1 23 222 245 222 245 0.97

2 14 0.017 0.94 10.1 1.4 1 23 250 272 250 272 0.98

3 14 0.00056 0.031 14.7 0.6 2 23 276 298 276 298 0.93

4 14 0.00065 0.036 14.5 0.8 2 21 302 321 302 322 0.94

5 14 1.7 95 3.8 0.2 2 23 331 353 330 353 0.88

6 14 0.0014 0.08 13.5 0.2 1 23 358 381 358 381 0.95

7 14 0.0018 0.1 13.2 0.3 2 23 395 417 394 417 0.96

8 14 0.01 0.57 10.8 5.7 1 23 423 445 423 445 0.98

9 14 0.0069 0.38 11.3 1.0 1 23 479 501 470 501 0.98

10 14 0.0027 0.15 12.6 0.5 2 23 505 525 504 525 0.97

11 14 0.0074 0.41 11.2 0.3 3 23 545 566 544 566 0.97

12 14 0.0014 0.077 13.5 3.7 1 23 572 594 572 594 0.99

13 14 0.11 6.4 7.5 6.2 2 23 600 621 599 621 0.96

14 14 0.00012 0.0065 16.9 2.6 1 23 627 650 627 650 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00056	0.031	14.8	2.1	1	23	222	245	222	245	0.97
2	14	0.017	0.94	10.1	1.4	1	23	250	272	250	272	0.98
3	14	0.00056	0.031	14.7	0.6	2	23	276	298	276	298	0.93
4	14	0.00065	0.036	14.5	0.8	2	21	302	321	302	322	0.94
5	14	1.7	95	3.8	0.2	2	23	331	353	330	353	0.88
6	14	0.0014	0.08	13.5	0.2	1	23	358	381	358	381	0.95
7	14	0.0018	0.1	13.2	0.3	2	23	395	417	394	417	0.96
8	14	0.01	0.57	10.8	5.7	1	23	423	445	423	445	0.98
9	14	0.0069	0.38	11.3	1.0	1	23	479	501	470	501	0.98
10	14	0.0027	0.15	12.6	0.5	2	23	505	525	504	525	0.97
11	14	0.0074	0.41	11.2	0.3	3	23	545	566	544	566	0.97
12	14	0.0014	0.077	13.5	3.7	1	23	572	594	572	594	0.99
13	14	0.11	6.4	7.5	6.2	2	23	600	621	599	621	0.96
14	14	0.00012	0.0065	16.9	2.6	1	23	627	650	627	650	0.97

Sequence Information

Coding Sequence: ATGCATGAAACCAACCTTGAAGACAGCACAAACAGCATTCTTTGGCTGCACGAAAAGTTGAAATGCCTCTGGAACTGCACAAAATTCTGTGGGATGTGCTTAGAAACTGAAAATCTGAATGCCATCAACTTGGAGCTGGTTATAAGTCGACAGAAAGAGTCCAAGTCATTATTGGATATTATTAATTTTATATTTAGAGATGATGTTGCAAATATAATGTCTTGTTCCTATATATGTGATAAATGCACAGAGAAGACACTACAATCCTACATTTTTATTAGCAACACAAAGAAATTATCCAAAGTAATAAACACATGTGTTAATGATTTACATTCAAAAGTGACAGATATTAATGAACAAGTATTAAGTACTTTAGAATGTAACAAATCTAACATCGTGATAGTTTTGGAAGAAGACGATGATACTCTTGAAGACATCAAAGAATTAACAACTGTGTCCGAAATAGTGCCAACACAGAATCCTGTACTCAAAAAACTACCACAGACTAATATTAGTAGCTCTAAATCTACAGTTGTGATAGTCGAAGATGATGACGTTTTGAATAGAATTAATACGAACAAGCACATAACCGCGAAAGGTGGTGAAATAGTTATAAATCCTATTAAACTGAATATAGCTCCTTCAGTGCCTCAATATGTAATCTATAAATGCTCAAAATGCACAGCCATTTTCACGACATACAAGTCCTTGAAGGAACACGAAAAAGTAAAACATAGCAGTAAACTTTTTAAGTGTACGGTTTGTTCAAAAGTTTATTTGACCTTACAGTCCTTAGATTTACATTATAAAACTCATGAAGTGGCTCGCTGTAGCGAATGTAACATGCAGTTCTATACAAAAGCAAGCCTCAGGATTCACATAGACCAATATCACATTGAGAATACTTGTGAATATTGTGATAAAGAATACAATAGGCCATTCTTCCTACAAAAACACAGAAATCAGTGTAAAACAATAATTAGAAAAATTAAATGTGACCAATGTGTAGCGTCATTTGATAATGTGGTGGATTACGACAAACATGTATTTTTAAAGCACAACAATGGAGGATATAAATGTACATTGTGCAATAAGAGATTCATGGAAGAAATTGAATTGCAACAACATGAGGCAATGATACACAGTAGCACGGTCCAGTATAAGAAGAGGAGTAAACATATTGAGTGTACACTGTGTGAAATCAAATTTAAAAGTATTAAAATGTTGCAACAACATCAAGACACGATTCACAAAGCTGGCACGCTCTTTCCTTGCAAGAGCTGTTCGAAGAAATTCTACAGCTTAAAGAAGCTGCAATTGCATCAACACCGACATTACGAAAGGATTCAATGTGAGAAATGCCGAAGAAAAATCATTAGTGCCTTTTACCTCAAGCACGTGATTAAGTGTAGCTCTGAGTGGAACATGAAGAAACATATTTGTGAAATGTGCGGGAAAGCGCTCCTTTCAGAAACCGCTTTGAACAATCACATAAAAACACACCAGATTGTCACATGTCCGGTGTGCAACAAACGACTGAAAGAGTCTTTGCTCGAGAAACACATGACGAGACATAAAAAAAATGTAGAGACCACTGGCTATTCAAATATTAAAGCCATACCGATGCGAGCTTGTCCGGTCTGCGGCCACTTGGTACGAAAAAAACTCGATCTCGAAGCGCATATGAACCGCTACCATTACAAAATCAAGCCCTTTAAATGCCAACAATGCAGCAAAGAGTTCTGTGGACGAGCCAGATTGAGGGAACACCAGTTGACTCACGAGGAGAAGTCTTGCATTTGTAACATATGTCACAAGAAAATGGCTAATCGTGTATGCCTTAAAATGCATCTTAGGATACATACAGGCGAATGTCCTTACACTTGTGAGCATTGTGGCGAAAAATTTCGATCATCAAGCATACTCAGTACTCACATACAAAAGAAACATGCCGAGAAGACCGTCTCATGTCCATCTTGCGACAGTATGTTCCATTTTGTGAGAGAAATGAGGCATCACTTCAAACATGTTCATTGGAAAGGGAAAGACCGACCTTTCGATTATAAAGAAGTTGTGCCTAAAATGTACCATCACCTGTTCGAAGACGGGAGACTGCCCAAACTTGATGATAATGAAACTTGA
Protein Sequence: MHETNLEDSTNSILWLHEKLKCLWNCTKFCGMCLETENLNAINLELVISRQKESKSLLDIINFIFRDDVANIMSCSYICDKCTEKTLQSYIFISNTKKLSKVINTCVNDLHSKVTDINEQVLSTLECNKSNIVIVLEEDDDTLEDIKELTTVSEIVPTQNPVLKKLPQTNISSSKSTVVIVEDDDVLNRINTNKHITAKGGEIVINPIKLNIAPSVPQYVIYKCSKCTAIFTTYKSLKEHEKVKHSSKLFKCTVCSKVYLTLQSLDLHYKTHEVARCSECNMQFYTKASLRIHIDQYHIENTCEYCDKEYNRPFFLQKHRNQCKTIIRKIKCDQCVASFDNVVDYDKHVFLKHNNGGYKCTLCNKRFMEEIELQQHEAMIHSSTVQYKKRSKHIECTLCEIKFKSIKMLQQHQDTIHKAGTLFPCKSCSKKFYSLKKLQLHQHRHYERIQCEKCRRKIISAFYLKHVIKCSSEWNMKKHICEMCGKALLSETALNNHIKTHQIVTCPVCNKRLKESLLEKHMTRHKKNVETTGYSNIKAIPMRACPVCGHLVRKKLDLEAHMNRYHYKIKPFKCQQCSKEFCGRARLREHQLTHEEKSCICNICHKKMANRVCLKMHLRIHTGECPYTCEHCGEKFRSSSILSTHIQKKHAEKTVSCPSCDSMFHFVREMRHHFKHVHWKGKDRPFDYKEVVPKMYHHLFEDGRLPKLDDNET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00236173;
90% Identity: -
80% Identity: -