Bmor015427.1
Basic Information
- Insect
- Bombyx mori
- Gene Symbol
- -
- Assembly
- GCA_027497135.1
- Location
- CP114969.1:17523533-17528321[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-09 9.7e-06 25.2 0.0 4 35 44 76 41 81 0.92
Sequence Information
- Coding Sequence
- ATGCATCGCTTTGCTTTCGTGGCTCGCCTCATTGAGAACTCTCACGCTTGGCTTGGACCATCCACTTCGGCTTTGGCAGACTATCACGGACATTCGCTCAAGCTGAAGGCGCCCACCTGGACCCAGAGCCAACTCCAAGAAGCCATCCAAGCGGTCATCACTCAGCGTATGAGATTTACGCAGGCCGCTACACATTACTGCATACCTAAAGGCACATTATACGACAATATATTGGGGAAATCGAAACGCATGGCGGTTTTGGACCAAGCCGGTCTCTTAGCTAACGAGGAAAGGGCCATCTTAGACTTTTGCTGTGAGACAAGCGTTTCTCCTTACAATAGACGAACAAAGAAATCCCTAGCGGAAATTCTGGCGTTCGTTGAAAAGTTACGTAGAACGAGGGATCCTAATTTTGCGTTCATAGGGTTAACTGGGTTTAGGTGGTGGTGGGCCTTCTGCAAGAAACATTCCATTGTGTCTCTGTATTACGACGGAGGGCCAAAGAACAAGAAAATAAAATGCGAGTTGAGTATTGATGATGAATCTTAA
- Protein Sequence
- MHRFAFVARLIENSHAWLGPSTSALADYHGHSLKLKAPTWTQSQLQEAIQAVITQRMRFTQAATHYCIPKGTLYDNILGKSKRMAVLDQAGLLANEERAILDFCCETSVSPYNRRTKKSLAEILAFVEKLRRTRDPNFAFIGLTGFRWWWAFCKKHSIVSLYYDGGPKNKKIKCELSIDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025190;
- 90% Identity
- -
- 80% Identity
- -