Basic Information

Insect: Bombyx mandarina
Gene Symbol: zfy1
Assembly: GCA_003987935.1
Location: NW:450059-471206[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.2 1e+02 3.2 0.6 1 23 475 498 475 498 0.95

2 11 0.00083 0.037 14.0 0.2 1 23 505 527 505 527 0.99

3 11 0.025 1.1 9.3 0.8 1 23 531 554 531 554 0.97

4 11 0.72 33 4.7 4.8 2 23 562 583 561 583 0.96

5 11 1.8e-05 0.00083 19.2 1.7 1 23 587 610 587 610 0.91

6 11 0.0002 0.0093 15.9 0.8 1 23 616 638 616 638 0.97

7 11 0.024 1.1 9.4 2.3 3 21 649 667 648 672 0.93

8 11 7.1e-05 0.0032 17.3 0.6 1 20 680 699 680 700 0.96

9 11 0.00016 0.0074 16.2 1.1 1 23 708 731 708 731 0.98

10 11 2e-06 9e-05 22.2 3.0 3 23 740 760 739 760 0.98

11 11 1.6e-06 7.1e-05 22.6 1.9 1 23 766 789 766 789 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.2	1e+02	3.2	0.6	1	23	475	498	475	498	0.95
2	11	0.00083	0.037	14.0	0.2	1	23	505	527	505	527	0.99
3	11	0.025	1.1	9.3	0.8	1	23	531	554	531	554	0.97
4	11	0.72	33	4.7	4.8	2	23	562	583	561	583	0.96
5	11	1.8e-05	0.00083	19.2	1.7	1	23	587	610	587	610	0.91
6	11	0.0002	0.0093	15.9	0.8	1	23	616	638	616	638	0.97
7	11	0.024	1.1	9.4	2.3	3	21	649	667	648	672	0.93
8	11	7.1e-05	0.0032	17.3	0.6	1	20	680	699	680	700	0.96
9	11	0.00016	0.0074	16.2	1.1	1	23	708	731	708	731	0.98
10	11	2e-06	9e-05	22.2	3.0	3	23	740	760	739	760	0.98
11	11	1.6e-06	7.1e-05	22.6	1.9	1	23	766	789	766	789	0.95

Sequence Information

Coding Sequence: atgaatgtaaaaaaCGATTCTAAGTCTTTGAATGAACTTTGCGTGGTGTGCCTCTGTGTGGGGCGGTCTCTCCGAGTTATCACCGAAGACAAGATCCTGAAATACTACTTGGACGCTCTGCAAGAGATACCTTTAAATAGGGTATCATCAGTTCTGCTAGTGTGCTGGGAGTGTGAGGTGCTGCTGAAGAGGGCTGTACAGTTCAGACAGCAGGTCCAGGATTCCCACAGGATACTGCAAACCTACACTAAAGAGAATTTAAACGAATATTTGCTGACCGAAGTATCAAGGCCGCCGCGTTTGAAGATCACCAAGAACGAGATCATCGCGATATCGCCGCACGTGGATTGTTCTAGAAGACCAAATGTTCGGGTAGATTTTAAAGATGAAGTCAAAAACGAAGTGATCCAAAATTTCATCGGTTCTGTTGAACGCGAACAAGAAGATGCCTTGGTAAACGTCAGGAGTGTGTCGAAGAGGAAATCCAAACAATGGACTCGAAAGAAATTGAAGAGGAACAGAGAGAAATTCTCCGAGTGCTTCCTTAATGAAGTGTCATATGCAACCAGCGGCACTCGCAATCGGAAGGACCTGCAGAGCGTGCTTGTAAAAGATgaagttaaaaatgaaaaatctgGCAGCGATATTCGAATGTCTGACGAGTGTGTAATAGACGCGGACTTCTCTGATGACTCCACAGAAGAAATAGGATTGAAAGATAACAAAAATGGCGATAAATTTAGTGGATCTGAGGGAGATATTGAAACCGCCTTCGAGGATGACAAATTCACCGAGTGCTTCCTTAATGAAGTGTCATATGCAACCAGCAGCACTCGCAATCGGAAGGACCTGCAGAGCGTGTTCGTAAAGGATgaagttaaaaatgaaaattctgaCAGCGATATTCAAATGTCGGACGATTGTGTAATGGACCCGGACTTCTCTGATGACTCTGGAGAAGAAATGGgattgaaagaaaagaaaagtagcGATAAATTTAGGGGATCTAAGGGAGATAATGAAACCGCCTTCAAGAATAACAAAATTCAGAACATGAGCGATACGGGGGGCATACCATTAAATGTGAATATTGAAGACAATGCAACATTGGATTTGCAGTTTGATTGTCTGAAAGTGGAGATTGACAATGGGCGGTCGCGCGATGAGGCCGGGAGCGGGATTGATCCGGGGACTGCGATGCACGATCACCCATCGGCCAAAGTCCCGGGCACGttgaagaggaagaccaaacgTTGCCCGGCGAAGAAGACGAAGAAAGCGAAAGGCGTCAAAGGAAACGGTGTAAACAAAAAGGTGAAAGGATCAGAAGAGAAGCTTTATACTACGATCGAGCTTACGCACGAGCAGATGCTCGACGAGAGGAACGCCGCTCACGGCTCCGAGAGCTTCCAAAGTTCGGCCTACAAATGCGAAACTTGCATTCTCGGCTTTCAGTACCGGCGGCCTTACGAAGCTCATCTAAACTCTAGACACGCAAAGACGCTCGGCGATTACGTATGTCCTATATGCAAGACGGTGGTGATGTCCGTGGACTCTTTCACGGCGCATTACAGACGTCACATGAGAAGGTTCCAGTGCAACTTGTGCGAGAAGAGAACCATAGACAGGGGCCGTATCAAGCAGCATCTGTACACGGAGCACGGGGTCGTGATGTCGACGATCAAGTGTAAGCAGTGCGGCCACGTGTCCCGCTCCTTAGACAACCACATACACCACCTGGACACGCACAAGGGAAGGTTCAAATGCAAAGAGTGCACCAAAACCTTCAAACACAGAGGGGGACTGAAGAATCATGCGATCGCGGTGCACGAACTCAAGAATAACTTCCCGTGCAGCGTGTGTCAGAAGGTGTTCCGCTGGAAGAACAGCCTGAAGAGGCATACGGAGGTGCACCTAGCCAAGGACACGACAGAGGCGGCCTACTGTGAATCCTGCGGTATAGGGTTCAAGTCGGTATGCTCATTTCAAAGACACATGAAGAATAGCTTGAAGCACGTGACGCACGATCAACGGAAATACGTGTGCGATCATTGCAACCGAAGATTCATAGACAAGACGAAACTCCGAGATCACATTGAATGTAAACACATGCACAAAACCTACCAGTGCCACATATGTTTGAAGccTTCTAAGAACAGAGTGAATCTAGATCAGCACATAAGGAACGTGCACAAAGGGCGaccgaataataaaatatgccaTCATTGTGGCAAAGGATTTCCgACCAAAGTCCAGCTCGACTCGCACATGCGTACGCACACGGGAGAGCGTCCCTTCATATGCGAGTATTGCCCGACCACGTTCACACAGAAATCGAATCTATACAAGCACTACAAACAGGTACACCTCAATATAAAATCGAAGAGGTATCCGCCGGTCAAGAAACCGAAAGACGCGCTAAACTGCCAACCGTCCATCGGGGGGTTCGAGAGAATCAATGGCACGACGTACCCGCCAGAAAGAGGTCTCGTGCCGTGCTGA
Protein Sequence: MNVKNDSKSLNELCVVCLCVGRSLRVITEDKILKYYLDALQEIPLNRVSSVLLVCWECEVLLKRAVQFRQQVQDSHRILQTYTKENLNEYLLTEVSRPPRLKITKNEIIAISPHVDCSRRPNVRVDFKDEVKNEVIQNFIGSVEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNGDKFSGSEGDIETAFEDDKFTECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIQMSDDCVMDPDFSDDSGEEMGLKEKKSSDKFRGSKGDNETAFKNNKIQNMSDTGGIPLNVNIEDNATLDLQFDCLKVEIDNGRSRDEAGSGIDPGTAMHDHPSAKVPGTLKRKTKRCPAKKTKKAKGVKGNGVNKKVKGSEEKLYTTIELTHEQMLDERNAAHGSESFQSSAYKCETCILGFQYRRPYEAHLNSRHAKTLGDYVCPICKTVVMSVDSFTAHYRRHMRRFQCNLCEKRTIDRGRIKQHLYTEHGVVMSTIKCKQCGHVSRSLDNHIHHLDTHKGRFKCKECTKTFKHRGGLKNHAIAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHDQRKYVCDHCNRRFIDKTKLRDHIECKHMHKTYQCHICLKPSKNRVNLDQHIRNVHKGRPNNKICHHCGKGFPTKVQLDSHMRTHTGERPFICEYCPTTFTQKSNLYKHYKQVHLNIKSKRYPPVKKPKDALNCQPSIGGFERINGTTYPPERGLVPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00236896;
90% Identity: iTF_00236896;
80% Identity: -