Basic Information

Insect: Bombylius major
Gene Symbol: -
Assembly: GCA_932526615.1
Location: CAKOBF010000342.1:29859-47234[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.12 6.8 7.6 0.7 3 23 321 343 319 343 0.91

2 17 2.4 1.4e+02 3.4 0.5 2 23 414 434 413 434 0.94

3 17 1.7 1e+02 3.9 2.0 3 22 500 519 498 522 0.90

4 17 0.02 1.2 9.9 0.9 2 19 544 561 543 564 0.93

5 17 0.029 1.7 9.5 3.0 1 23 581 604 581 604 0.95

6 17 0.16 9.2 7.1 1.1 1 20 609 628 609 633 0.81

7 17 0.16 9.4 7.1 1.0 2 23 648 670 648 670 0.96

8 17 0.0017 0.099 13.3 0.1 2 21 676 695 675 696 0.94

9 17 0.07 4.2 8.2 0.8 2 23 865 886 864 886 0.91

10 17 0.4 24 5.8 5.9 2 23 900 920 899 920 0.95

11 17 5.6e-05 0.0033 18.0 3.0 1 23 926 949 926 949 0.95

12 17 7.6e-07 4.5e-05 23.9 1.2 1 23 973 995 973 995 0.97

13 17 3.5 2e+02 2.9 0.1 1 23 1002 1026 1002 1026 0.80

14 17 0.15 8.8 7.2 1.3 1 23 1032 1056 1032 1056 0.97

15 17 0.0065 0.38 11.5 1.1 2 23 1063 1084 1062 1084 0.97

16 17 0.00026 0.015 15.9 2.4 1 20 1090 1109 1090 1111 0.95

17 17 3.4 2e+02 2.9 0.4 1 10 1121 1134 1121 1148 0.63

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.12	6.8	7.6	0.7	3	23	321	343	319	343	0.91
2	17	2.4	1.4e+02	3.4	0.5	2	23	414	434	413	434	0.94
3	17	1.7	1e+02	3.9	2.0	3	22	500	519	498	522	0.90
4	17	0.02	1.2	9.9	0.9	2	19	544	561	543	564	0.93
5	17	0.029	1.7	9.5	3.0	1	23	581	604	581	604	0.95
6	17	0.16	9.2	7.1	1.1	1	20	609	628	609	633	0.81
7	17	0.16	9.4	7.1	1.0	2	23	648	670	648	670	0.96
8	17	0.0017	0.099	13.3	0.1	2	21	676	695	675	696	0.94
9	17	0.07	4.2	8.2	0.8	2	23	865	886	864	886	0.91
10	17	0.4	24	5.8	5.9	2	23	900	920	899	920	0.95
11	17	5.6e-05	0.0033	18.0	3.0	1	23	926	949	926	949	0.95
12	17	7.6e-07	4.5e-05	23.9	1.2	1	23	973	995	973	995	0.97
13	17	3.5	2e+02	2.9	0.1	1	23	1002	1026	1002	1026	0.80
14	17	0.15	8.8	7.2	1.3	1	23	1032	1056	1032	1056	0.97
15	17	0.0065	0.38	11.5	1.1	2	23	1063	1084	1062	1084	0.97
16	17	0.00026	0.015	15.9	2.4	1	20	1090	1109	1090	1111	0.95
17	17	3.4	2e+02	2.9	0.4	1	10	1121	1134	1121	1148	0.63

Sequence Information

Coding Sequence: ATGCTGGAGGAAGATATCGATGATACACATCTTTGTATTAAATGTAGTACAACAATTGTTGGTATTGAAAATTATGTACAACATAGAAAAAATTCATGTTCATCAAAAACAAATCGTGATATAGTTCATGTTGATCATCCATATGATGGTACATATGATTTTTCTGAAACATCAGCATATCATCATCATGATCATCATAAATCTGAAGAAGTTGAAAAACCAGGAAAATCATTATCAGAATCTTATGATTTACCTTATGATTTAGGTGCGGATGTATTTTTTTCATCATTAGAGCTTCAAAGTAGCTCAAAACGTACTTTACGTAATGTTAATGGTACTACTAATAATAATGGAATTAGTGGTGGTGGTGGTGGTGGTAAACATTCTTCAACGACATCATCACGTATATTAACACGTAAAGCTACTGCTGCATTATTAGCACATCATGAACAAGAAGATGAATGGATTGAACAAACATCATCAACACCAAATAATAATTCTCACAATTTAATGATAAGTGGTAATAAAAAATGTGAACCGCCATCATCAGTTTTCACATTTAATCATGATTCACCTGAACCAGAAACTGAAGATGAAGATGATGTTGATGATGAAGATTATGAAACAACCAGTCCAAGTGTTCCAGCAAATCATACTGGCGGTAAATGGAAGCCAACAGATAATAATGCTGGTAATTTAAGACAACATCACGATCATCATACATTATTAAGAAATTCACCATCATCAGCTTGGGATGATCGACATCATAATTGGGATATTATAACAGATACAGTTGATGAAAAAACTGGAAAAATTCATGAAATACAAGATGATTTTGATCATGATTTTAATCCACCACCAGGACATACTAAAGGTAAATGGGTACCTGGTACGAAAATTGTGAAACTTGATTACAAAGAAGAAGTTGAAATTGAAAGAATTTATACACGTCAATATTGGTGTAATACATGTAATCGTAAATTAGCATCAAAAATATTATATGAACGTCATTTAAAATCAAATCTTCATTTGAAAAGATCCGAACCAGAACAACAACTTGAAAGAGCTGCTGTTCAAATGATAACACTTCCAGAACGAATTAAAAAACCATCAAAATATTTAAATTCATCAATGTATGTAACATCATCAATAAAATCGGATATCTCAGAGAAAAAATCGAAAACTACACCAACTTCTGAAAAATCATCAGAAAAACGAAAACGTCGAAAATACTATACAAAATGTGAAACATGTAAAATAAGACTACCAAAATCTTCACTTGGAAAACATTTAATATCACATTATCATTATCGACGTATGATTCAAAGTCCAATAAAATCTTATGATATGATTCTTGAGAATATGGATAGAATTGTTAAACAAGCACCATATCAATGTCAACCATGTCAATTCTATACAAATACTGAAAATGATTTTTTATGGCATTGGAATACATCAAATCATCGTGATATTACTGAAGGTCCTGGTAGATTTTGGTGTAGTTTTTGTAAATTTGAATGTGAAGATAATAATCAAATGAGACGTCATTTATTAAGTATTGAACATAAAGAAATTGTATTAACTATTAATCGTTCTGTACCAATTATAATTGGTAAAAAAATAATTATTGAATGTTATAAATGTAAACAAATATTTCGTTATAATTTTGAATTACGTAAACATGCTGAACATTGTACTGCTGAACCAACTGGTACAGCATCAAATAATTATCAATCAAAATTTAATTGTAATTTATGTAATATTATTTGTAAATCACGTTTATCATTACAAAAACATCAATTATTAAAACATAAAAGAAAAAATTTTTATTGTTCAATATGTAATAAAAATTTTGAAACAGCATTAAAATCTAAAAAACATCGATCATCAATTGAACATAAAATTTGTTCATCATCGAAAAAACATAAAATTTTAATAAGAAAATGTAAAATTTGTAATGAAACTTTACAAGATATATTAAAATTGAAGGAACATATGAAATTAAAACATCCCGAATGTAAATCTTCATGTCCTCATTGTGGTAAAACTTTTGCTTTACCGCAAGAAGTTGGTCGTCATATTCGAGATATGCAGTGTAACCAGTCAAAAGAATTGCATTTATCAGGACTATTGGAATCAGATGAAATAACTTCGATAGCTTCTACACCTTGTTCTACTACACCATCTTCATCCTTGAATACTACAGCTCTATCAACTACTACTACATCAAATATCTCTTCCTCTTCTTCTATGACGAATCCTGAATCCACTCCTCTATATTTATCAACAATGTCACTAGCATCATCGAAAACAGTTCTTTCCACAACTAATTCCTTATTCCTTACAGTACCATCAACATGTTCTACAGTACTAAATCCACCACTTCTTTCTACCGTTAATAGTCCTCTGTTTCTGACAATTTCTCCAACACCTTTAACACGACAAGATATTGCCCACGATACAGTTATTTCAAGTCCAATTGTTGTTGAACATATCACCACAAATACTGAAAAATTATATTCATCAACAAATGATAATAATGAATCTAATGACATACCAAAAGAAACACAAACTGAAAACGATAAAATGTTATCCTGTTCAAAATGTGATTACAGAACAACAATGAAATCAGAACTTTTATATCATGAAATTTTTCATAAACAAGAAAATTTAAATTTAAATAAAAAATTAAAAATTTCATGTCCATTATGTGAAAAAAAATTTCGAAAACATTCATTAAGATGTCATTTACGTCAACATACTAATGAAAAAAATTTCATATGTAATTATTGTCAAATGAGTTTTGGTCGAAAACATAATTTAAAAACACATATCATAAATCGGCATGAAACTGATAAAAAACAACAAAAACAACAGAAAATAAAAAAAGATTCTAATGATAAAATACAAGCAAAATATCAATGTGATACATGTGGAAAATCTTTTAAAAAAAGATATTCACTTCAACAGCATATTGGCATACATGGTGAACGTGACAAAAGATTCAGTTGTCCAAAGGAATTATGCATTTTTATTGGTAGAGATGCATCAGATTTAAAAATTCATTTAAGTATACATTCAACAGAGAAAAATTTTAAATGTACATACGATGGATGTGATTATATGGGAAAAACTATGAGACTTTTAAAAAAACATTCCATAAAGCATGAATCAAATAAAATATTATCATGTCCAGAATGTAATTTTACAGCTAAACTTTCAGGACATATAAAACGTCATATGCTTACGCATACTGGAGAAAAACCTTATAAATGTCCACATTGTTCTTATTCTTGTAATAATTTGGAGAATTTAAGAAAACATGTTTTATTAACTACATTACATACCGGTAAATATTTATATGAATGTGAATATTGTGATACAGAAGAAAAATTTAAAACGAATTTTCAACGTGAATATCGTGCACATTTAGTTATTACTCATAGAATTGAAGTTGAAAAATTAAAAGAATTAATTAACATTTTGCATAATGATGCGTTTTCTCGTTGA
Protein Sequence: MLEEDIDDTHLCIKCSTTIVGIENYVQHRKNSCSSKTNRDIVHVDHPYDGTYDFSETSAYHHHDHHKSEEVEKPGKSLSESYDLPYDLGADVFFSSLELQSSSKRTLRNVNGTTNNNGISGGGGGGKHSSTTSSRILTRKATAALLAHHEQEDEWIEQTSSTPNNNSHNLMISGNKKCEPPSSVFTFNHDSPEPETEDEDDVDDEDYETTSPSVPANHTGGKWKPTDNNAGNLRQHHDHHTLLRNSPSSAWDDRHHNWDIITDTVDEKTGKIHEIQDDFDHDFNPPPGHTKGKWVPGTKIVKLDYKEEVEIERIYTRQYWCNTCNRKLASKILYERHLKSNLHLKRSEPEQQLERAAVQMITLPERIKKPSKYLNSSMYVTSSIKSDISEKKSKTTPTSEKSSEKRKRRKYYTKCETCKIRLPKSSLGKHLISHYHYRRMIQSPIKSYDMILENMDRIVKQAPYQCQPCQFYTNTENDFLWHWNTSNHRDITEGPGRFWCSFCKFECEDNNQMRRHLLSIEHKEIVLTINRSVPIIIGKKIIIECYKCKQIFRYNFELRKHAEHCTAEPTGTASNNYQSKFNCNLCNIICKSRLSLQKHQLLKHKRKNFYCSICNKNFETALKSKKHRSSIEHKICSSSKKHKILIRKCKICNETLQDILKLKEHMKLKHPECKSSCPHCGKTFALPQEVGRHIRDMQCNQSKELHLSGLLESDEITSIASTPCSTTPSSSLNTTALSTTTTSNISSSSSMTNPESTPLYLSTMSLASSKTVLSTTNSLFLTVPSTCSTVLNPPLLSTVNSPLFLTISPTPLTRQDIAHDTVISSPIVVEHITTNTEKLYSSTNDNNESNDIPKETQTENDKMLSCSKCDYRTTMKSELLYHEIFHKQENLNLNKKLKISCPLCEKKFRKHSLRCHLRQHTNEKNFICNYCQMSFGRKHNLKTHIINRHETDKKQQKQQKIKKDSNDKIQAKYQCDTCGKSFKKRYSLQQHIGIHGERDKRFSCPKELCIFIGRDASDLKIHLSIHSTEKNFKCTYDGCDYMGKTMRLLKKHSIKHESNKILSCPECNFTAKLSGHIKRHMLTHTGEKPYKCPHCSYSCNNLENLRKHVLLTTLHTGKYLYECEYCDTEEKFKTNFQREYRAHLVITHRIEVEKLKELINILHNDAFSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00234327;
90% Identity: iTF_00234327;
80% Identity: -