Bmaj003366.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- zbtb8a.1-b
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000047.1:754648-757485[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.12 7.1 7.5 2.3 1 23 389 412 389 412 0.96 2 13 0.00046 0.027 15.1 1.6 1 23 418 441 418 441 0.94 3 13 0.0003 0.018 15.7 3.7 1 23 448 471 448 471 0.97 4 13 0.0026 0.15 12.8 2.0 1 23 476 498 476 498 0.98 5 13 0.0048 0.28 11.9 7.4 1 23 504 526 504 526 0.97 6 13 1.1e-06 6.6e-05 23.3 0.7 1 23 532 554 532 554 0.98 7 13 0.0014 0.08 13.6 1.0 3 23 562 583 561 583 0.97 8 13 0.15 9.1 7.2 2.8 3 23 596 616 596 616 0.97 9 13 6.1e-06 0.00036 21.0 0.7 1 23 657 679 657 679 0.98 10 13 1e-06 6.1e-05 23.5 0.7 1 23 685 708 685 708 0.97 11 13 0.013 0.74 10.6 2.7 1 23 714 736 714 736 0.92 12 13 0.015 0.89 10.3 4.7 2 23 742 763 741 763 0.97 13 13 0.00046 0.027 15.1 0.0 1 23 769 791 769 791 0.97
Sequence Information
- Coding Sequence
- ATGGATGAAATAGAATTTAAATTAGATAACGCTTGTCGTACGTGTGCAACATTAACGACTCACGAGACCTTAATTCCAATTTATGATAGAGTTGAAATAACTACGGGGATAACTACAATATTTTGCATAAATGAAGAACTTGAGTTAATGAATATTGAGATAAAAAAAAATGACAATCTACCGCAACAAATTTGTCTCAGTTGCATAAATGAATTAAAAAATTTCCATGTATTTCGTAAGCTATGTAGACTTGCTCAAAATGCTTTAACAAAGTATTTCATTAAATCAACTTCACAGATTAAAATGATAAATGAAACTAGTCCCAATATTTTTAATGAAACAAATTCGATTGTTTTTCAAGATGATACAGCAAAAAGCGATGATGAATTTCTTAATTTGAATGGTATTACTGAAATAAAAACTAAAAATACAATAAAAAATAGGGATTCAAATTCTATTAAAGAAAATATAGAAATTTTACAGGATGAAGAATTAATTGTTGATGAAGATGGAAGTGTTAGTGAAGACATCGAATTTGTAGAAGTTTCTATTTCTGCAATTGAAACTTTAAGTGCTGAAAAAATAGGAACTGAAAATCTTGATAATGATTCAGTATGTATGTTAAAAAATGAAACAAATTCAAATAGTTTCGACGGAAAAATTTCAAAAGCTGTACAAGATGAATTTTTTACAGCTGAAACAACTAATAATGAAAATATAAATTTTATGGAGAAGACTCAAAATGATTTTGAAATAAAAAGTGAAAATATTTGTATTGAAAAAATTGAAAAACTAACGACTGAAACAAATTCACATACTTTTGATAAAATAAGTTTAAGTCCTTTGCAAAATTATAAAGGTCTTTGTAAAATAGAAACCACTACCAATGAAAATTTAGAAGATTCTGATGCATCTGTAAATTTAAACGGCAAAACTGCAATTAAAAGTGATGACTCAGAAAATTTTATTGCCTACAAGGCCAAAATGGTTTTATGCACTTATGAAAAAGATTCTCAAGTAAAGACACTAAAGACTGAAAATCGAACTGAAACTTTAAGTATTGACAAAGATCGGCTATCGTTAAGTCATTGTACAAATTGTTTGTGTTATGCACACAAATCAACAAAGATTTGTCATAAAAAGTGTAAATTAATTGAGGATGATTTTACGTGTTATTATTGTACTGATAGATTTAATACAAAAAATGAAATTGAAAATCATATTTATAAAACACATTCACCTGATCGTCCATATATATGTCCAATTTGTGAAGAAACTTTTGATACATCTTCAAATTGTAAAAGACATTTAGGAAAATATCACAGTGATATaaagaaaccattcacatgtgacatttgtaattcgaaatgttcaaatttatccgaattaaaacgacataaacgctctttacatgttattggaaattatgaatgtgatatttgtcatgaaagatttgaaactgctaaaagatatgaatatcatgttaaatcacacagcacagataaaccatttaaatgtaaatattgtacaaaatcatttttacaatcacatcatttaaaaaatcatgaaactattcatactcgtgaaagaccttatgcttgtgacgaatgtggaaaaacatttatatattctgataattattcgttacatatgaaaaagcatagaggaggagtaagtaatctttgtgaagtatGCGGAAGTGATTTTTCGAAAAAAAAAGATTTGTATAATCATATGAAACAAAAGCATAACATGAATTTAGAAAAAAATGAAATAAAACATTGGTGCTCAATTTGTGGTAGAGGCTTTCGATTATTTTATAATTTTAAATGTCATATTAAAGCACATAAAACACAACAGAAACTAGCACCAGAAAAAATAATTACAAAAGAAAACAAAATAGATGATGAATACAAAACAAATGAAAATAATAATGAAAAAGAGTCTGTTAAAGAAATAAAAGAATTATTTAACTGTCCTATATGCTTTAAAAATTTTATTTCACCATTTGGACTAAAAAAACATATTAAAATGCATGATCAAAGTCGAAAATATCCATGCGAAGTATGTGGTATAAGATACAAACGAAGTGAACATTTAAAACAACATATGAATATTGAACATTTAAAAATAAAAAAATATTCCTGTTCATATTGTGATAAAAAATTTGTATCATGTACAGCTAGAAATTCTCATGCAGTATCACATAAAGATGAAAAAATTCAATGTTCTCATTGTGATAAAATATTAAAAACTAAAAGGCATGCAAAGCTTCATGAACGTTCACATACACTTGAAAAACCTTATATTTGTCCAATTTGTGGTGAAAAATTTGTATTCATTCCTTCTTTTTGGGCTCATCAAAAGTGGCATTCAAAAGAAGAACAGATGAAGATGAAGGAAATAGTTCTAGCTGATAATTTAAATGCTCTACAAGCAACAAACAGTAGTTAA
- Protein Sequence
- MDEIEFKLDNACRTCATLTTHETLIPIYDRVEITTGITTIFCINEELELMNIEIKKNDNLPQQICLSCINELKNFHVFRKLCRLAQNALTKYFIKSTSQIKMINETSPNIFNETNSIVFQDDTAKSDDEFLNLNGITEIKTKNTIKNRDSNSIKENIEILQDEELIVDEDGSVSEDIEFVEVSISAIETLSAEKIGTENLDNDSVCMLKNETNSNSFDGKISKAVQDEFFTAETTNNENINFMEKTQNDFEIKSENICIEKIEKLTTETNSHTFDKISLSPLQNYKGLCKIETTTNENLEDSDASVNLNGKTAIKSDDSENFIAYKAKMVLCTYEKDSQVKTLKTENRTETLSIDKDRLSLSHCTNCLCYAHKSTKICHKKCKLIEDDFTCYYCTDRFNTKNEIENHIYKTHSPDRPYICPICEETFDTSSNCKRHLGKYHSDIKKPFTCDICNSKCSNLSELKRHKRSLHVIGNYECDICHERFETAKRYEYHVKSHSTDKPFKCKYCTKSFLQSHHLKNHETIHTRERPYACDECGKTFIYSDNYSLHMKKHRGGVSNLCEVCGSDFSKKKDLYNHMKQKHNMNLEKNEIKHWCSICGRGFRLFYNFKCHIKAHKTQQKLAPEKIITKENKIDDEYKTNENNNEKESVKEIKELFNCPICFKNFISPFGLKKHIKMHDQSRKYPCEVCGIRYKRSEHLKQHMNIEHLKIKKYSCSYCDKKFVSCTARNSHAVSHKDEKIQCSHCDKILKTKRHAKLHERSHTLEKPYICPICGEKFVFIPSFWAHQKWHSKEEQMKMKEIVLADNLNALQATNSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234209;
- 90% Identity
- -
- 80% Identity
- -