Bdis002785.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- zbtb8a.1-b
- Assembly
- GCA_939192785.1
- Location
- CALNDV010000157.1:179176-181968[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.093 5.3 7.7 1.5 1 23 408 431 408 431 0.93 2 13 0.00059 0.034 14.6 2.0 1 23 437 460 437 460 0.96 3 13 0.031 1.8 9.1 3.2 1 23 467 490 467 490 0.96 4 13 0.002 0.12 12.9 2.3 1 23 495 517 495 517 0.98 5 13 0.002 0.11 12.9 7.3 1 23 523 545 523 545 0.97 6 13 9.6e-07 5.5e-05 23.3 0.7 1 23 551 573 551 573 0.98 7 13 0.00053 0.03 14.7 1.0 3 23 581 602 580 602 0.97 8 13 0.02 1.2 9.8 2.3 3 23 615 635 615 635 0.99 9 13 5.4e-06 0.00031 21.0 0.7 1 23 672 694 672 694 0.98 10 13 9.1e-07 5.2e-05 23.4 0.7 1 23 700 723 700 723 0.97 11 13 0.0045 0.26 11.8 2.8 1 23 729 751 729 751 0.94 12 13 0.013 0.76 10.3 4.7 2 23 757 778 756 778 0.97 13 13 0.00041 0.023 15.1 0.0 1 23 784 806 784 806 0.97
Sequence Information
- Coding Sequence
- ATGGATGAAATAAAATTTAAATTAGATAATGCTTGTCGTACTTGTGCAACATTTACGACTGAGGATACCTTATTTCCAATTTATGATAGAGTTGAAATAACTACGGCTATAACTACAATATTTTGCATAAATGATGAGCTTAAGTTAATGAATATTGAGATAAAAAAAGATGACAATTTACCGCAACAAATTTGTATCAGTTGCATAAGAGAATTAAAAAATTTTCATGTATTTCGTGATTTATGTAGACTTGCTCAAAGTGCTTTAACAAAGTATTTCATGAATGAAACTAGTCCAAATATTTTTAATGAAACAAATTCGATTGTTTATCAAGATGATATAGAAAAAAGTGATGATGAATTTCTTAATTTGAATGGTATTACTGGAATAAAAACTAAAAATACAATCAAAAATGATAGAAATTATTTGTATCACAGAAATAGAAGGGACTCAAATTCTATGAATGAAGTAAATTTAGAAATTTTACAAGATGAAGAATTAATTTTTGATGAAGAACGTGTTAGTGAAGACATAGAATTTGTAGAAGATTCTGTTTCTGAAATAGATATTGAAACTTTGAATTTAAATGATGAAAAAATAGGAACAGAAAATCTTGATAATGACTCATTATGTTTGTTGAAAAATGAAACAAATTTAAATAGTTTCGATGAAAAAATTTCAAAAGCTGTACAAGATGAAATTTTTACAGTAGAATCAACTAATAATGAAAATATAGATTTTATGGTAAAGACTGAAAAAACTTTTCAAATAGAAAATGAAAATATTTATATTGAAAAAATTGAAAAACTAACTACTGAAACAGTCAAAAATCAATCAAATTCAAATACTTTTGATAAAATGAGTTTAAGTCCTTTGCAAGATTATAAAGGGATTTGTAAAATAGAAACAACTACCAATGGAAATTTAGAATTTCTAGAAGATTCTGGTGCATCTGTAAATTTAAATAAAGTTTTTGAATTAAACCTAAACGGCAAAACTGCAGTTAAAAGTGATGACTCGGAAAATTTCATAACTTTCAAAGCCAAAATGATTTCATGCACTTTTGAAAAAAATTCTCAAGTAAAAATTTGTGAAAATCGAACTGAAACTTTAAGTATTGACAAAGATCAGCTACCGTTAAGTCATTGTAGAAATTGTTTGTGTTATGCGTACAAATCAACAAAGATTTTTCATAAAAAGTGTAAATTAATTGAAGATGCTTTCACGTGTTATTATTGTACTGACAGATTTAATACAAAAAATGAAGTTGAAAATCATATTTATGAAACACATCCACTTAATCGTCCTTATATATGTCCAGTTTGCAAAGAAACTTTTGATACATCTTCAAATTGTGAAAAACATTTAGAAAAATTTCATAGTGATATaaagaaaccattcacatgtgacatttgtaattcaagatgtttaaatttgtccgaattaaaacgacataaacgctctttacatgttattggagattatgagtgtaatatttgccatgaaagatttgaaaatgctaaaagatatgaatatcatgttaaatcacacagcacagataaaccatttaaatgtaaatattgtacaaaatcatttttacaatcacatcatttaaaaaatcatgtaactattcatactcgtgaaagaccttatgcatgtgaagaatgtggaaaaacatttatatattctgataattattcattacatatgaaaaagcatagaggaggagtaagtaatctgtgtgaagtatgcggAAGCGATTTTTCAAAAAAAAAAGATTTGTATAACCATATGAGACAAAAGCATAACATGAATTTAGAAAAAAATGAAATAAAACATTGGTGTTCAATTTGTGGTAGAGGCTTTCGATTACTTTATAATTTTAAATGTCATATTAAAGTGCATGAAAAACAACAGAAACTAGAACCTGAAAAAATAATTATAAAAGAAAACAAAATAGATGATGAACAGAAAAACAATGAAAAAGAGCCTGTTGAAGAAATAAAAGAATTATTTAACTGTCCTATATGCTTTAAAAATTTTATTTCACCTTTTGGATTAAAAAAACATATTAAAATGCATGATCAAAGTCGAAAATATCCATGCGAAGTATGTGGTATAAGATATAAACGCAGTGAACATTTAAAACAACATATGAATATTGAACATTTAAAAATAAAAAAATATCCTTGTTCATATTGTGATAAAACATTTGTATCATGTACAGCTAGAAATTCTCATAAGGTATCACATAAAGATGAAAAAATTCAATGTTCTCATTGTGATAAAATATTAAAAACCAAAAGACATGCAAAGCTCCATGAACGTTCACACACACTTGAAAAACCTTATATTTGTCCAATTTGTGGTGAAAAATTTGTATTCATTCCTTCTTTTTGGGCCCATCAAAAGTGGCATTCAAAAGAAGAACAAATGAAGATGAAGGAAATAGTTTTAGCTGATAATTTAAAGGCTTTACAAGCAACAAACGGTAGTTAA
- Protein Sequence
- MDEIKFKLDNACRTCATFTTEDTLFPIYDRVEITTAITTIFCINDELKLMNIEIKKDDNLPQQICISCIRELKNFHVFRDLCRLAQSALTKYFMNETSPNIFNETNSIVYQDDIEKSDDEFLNLNGITGIKTKNTIKNDRNYLYHRNRRDSNSMNEVNLEILQDEELIFDEERVSEDIEFVEDSVSEIDIETLNLNDEKIGTENLDNDSLCLLKNETNLNSFDEKISKAVQDEIFTVESTNNENIDFMVKTEKTFQIENENIYIEKIEKLTTETVKNQSNSNTFDKMSLSPLQDYKGICKIETTTNGNLEFLEDSGASVNLNKVFELNLNGKTAVKSDDSENFITFKAKMISCTFEKNSQVKICENRTETLSIDKDQLPLSHCRNCLCYAYKSTKIFHKKCKLIEDAFTCYYCTDRFNTKNEVENHIYETHPLNRPYICPVCKETFDTSSNCEKHLEKFHSDIKKPFTCDICNSRCLNLSELKRHKRSLHVIGDYECNICHERFENAKRYEYHVKSHSTDKPFKCKYCTKSFLQSHHLKNHVTIHTRERPYACEECGKTFIYSDNYSLHMKKHRGGVSNLCEVCGSDFSKKKDLYNHMRQKHNMNLEKNEIKHWCSICGRGFRLLYNFKCHIKVHEKQQKLEPEKIIIKENKIDDEQKNNEKEPVEEIKELFNCPICFKNFISPFGLKKHIKMHDQSRKYPCEVCGIRYKRSEHLKQHMNIEHLKIKKYPCSYCDKTFVSCTARNSHKVSHKDEKIQCSHCDKILKTKRHAKLHERSHTLEKPYICPICGEKFVFIPSFWAHQKWHSKEEQMKMKEIVLADNLKALQATNGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00235252;
- 90% Identity
- -
- 80% Identity
- -